{ "type": "genome", "identifier": "GCF_001418335.1", "organism": "Streptomyces aurantiacus", "title": "Streptomyces aurantiacus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "USDA/ARS/NCAUR", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001418335.1", "bioproject": "PRJNA224116", "biosample": "SAMN04002962", "wgs_master": "LIPP00000000.1", "refseq_category": "na", "taxid": "47760", "species_taxid": "47760", "organism_name": "Streptomyces aurantiacus", "infraspecific_name": "strain=NRRL ISP-5412", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2015/10/28", "asm_name": "ASM141833v1", "asm_submitter": "USDA/ARS/NCAUR", "gbrs_paired_asm": "GCA_001418335.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/418/335/GCF_001418335.1_ASM141833v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "9255252", "genome_size_ungapped": "9253034", "gc_percent": "70.000000", "replicon_count": "0", "scaffold_count": "561", "contig_count": "561", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001418335.1-RS_2024_05_02", "annotation_date": "2024-05-02", "total_gene_count": "8347", "protein_coding_gene_count": "7874", "non_coding_gene_count": "71", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2015-10-28", "dateModified": "2015-10-28", "datePublished": "2015-10-28", "_annotation": { "sample_count": 1, "sample_organism": [ "Streptomyces aurantiacus" ], "sample_taxid": [ "47760" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Russia" ], 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95, "status": "conclusive" }, { "organism_name": "Streptomyces phaeochromogenes", "strain": "strain=NRRL B-1248", "accession": "GCA_001418655.1", "taxid": 1923, "species_taxid": 1923, "relation_to_type": "type", "validated": true, "ani": 88.0723, "matched_fragments": 1777, "total_fragments": 2811, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces umbrinus", "strain": "strain=JCM 4521", "accession": "GCA_014650195.1", "taxid": 67370, "species_taxid": 67370, "relation_to_type": "type", "validated": true, "ani": 88.0342, "matched_fragments": 1928, "total_fragments": 2811, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces fructofermentans", "strain": "strain=JCM 4956", "accession": "GCA_014651055.1", "taxid": 152141, "species_taxid": 152141, "relation_to_type": "type", "validated": true, "ani": 86.1478, "matched_fragments": 1694, "total_fragments": 2811, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces avermitilis", "strain": "strain=MA-4680", "accession": "GCA_000009765.2", "taxid": 33903, "species_taxid": 33903, "relation_to_type": "type", "validated": true, "ani": 84.5529, "matched_fragments": 1561, "total_fragments": 2811, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces avermitilis", "strain": "strain=DSM 46492", "accession": "GCA_001514135.1", "taxid": 33903, "species_taxid": 33903, "relation_to_type": "type", "validated": true, "ani": 84.4807, "matched_fragments": 1546, "total_fragments": 2811, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces dengpaensis", "strain": "strain=XZHG99", "accession": "GCA_002946835.1", "taxid": 2049881, "species_taxid": 2049881, "relation_to_type": "type", "validated": true, "ani": 84.4554, "matched_fragments": 1483, "total_fragments": 2811, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces olivochromogenes", "strain": "strain=DSM 40451", "accession": "GCA_001514115.1", "taxid": 1963, "species_taxid": 1963, "relation_to_type": "type", "validated": true, "ani": 84.4107, "matched_fragments": 1705, "total_fragments": 2811, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces mirabilis", "strain": "strain=JCM 4551", "accession": "GCA_014650275.1", "taxid": 68239, "species_taxid": 68239, "relation_to_type": "suspected-type", "validated": true, "ani": 84.4071, "matched_fragments": 1677, "total_fragments": 2811, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces avermitilis", "strain": "strain=NBRC 14893", "accession": "GCA_005405965.1", "taxid": 33903, "species_taxid": 33903, "relation_to_type": "type", "validated": true, "ani": 84.3607, "matched_fragments": 1621, "total_fragments": 2811, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces albiflavescens", "strain": "strain=CGMCC 4.7111", 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