# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_5	LOCUS_00050	sequence001:4543..4902(+)	internal_stop_codon	4900..4902(+)		WP_003546978.1	amino acid permease	100.0	25.7	95.0
MGA_6	LOCUS_00060	sequence001:4951..5931(+)	internal_stop_codon	4900..4902(+)		WP_003546978.1	amino acid permease	100.0	70.4	88.3
MGA_10	LOCUS_00100	sequence001:10081..11022(-)	partial			WP_003547408.1	DNA/RNA non-specific endonuclease	63.3	70.5	65.7
MGA_18	LOCUS_00180	sequence001:19801..20235(+)	frameshift		20220	WP_011254286.1	DASS family sodium-coupled anion symporter	97.2	28.7	87.9
MGA_19	LOCUS_00190	sequence001:20254..20448(+)	frameshift		20220	WP_011254286.1	DASS family sodium-coupled anion symporter	98.4	12.9	84.1
MGA_21	LOCUS_00210	sequence001:21353..21571(+)	frameshift		21568	WP_003547009.1	[citrate (pro-3S)-lyase] ligase	100.0	20.5	84.7
MGA_22	LOCUS_00220	sequence001:21592..21840(+)	frameshift		21568	WP_003547009.1	[citrate (pro-3S)-lyase] ligase	100.0	23.4	78.0
MGA_24	LOCUS_00240	sequence001:22071..22457(+)	internal_stop_codon	21987..21989(+)		WP_011254532.1	surface protein	52.3	8.6	41.8
MGA_32	LOCUS_00320	sequence001:27268..27912(+)	partial			WP_011674851.1	FMN-binding protein	77.6	55.3	53.8
MGA_33	LOCUS_00330	sequence001:27947..28228(+)	frameshift,internal_stop_codon	28266..28268(+),28353..28355(+)	28201	WP_011674850.1	FAD:protein FMN transferase	91.4	23.1	50.6
MGA_34	LOCUS_00340	sequence001:28374..28997(+)	frameshift,internal_stop_codon	28266..28268(+),28353..28355(+)	28201	WP_011674850.1	FAD:protein FMN transferase	99.0	58.0	69.4
MGA_36	LOCUS_00360	sequence001:29727..30008(-)	frameshift		29738	WP_003547029.1	transporter	92.5	78.2	80.2
MGA_39	LOCUS_00390	sequence001:32504..33145(+)	partial			WP_003642762.1	glycosyltransferase	94.4	39.4	25.0
MGA_41	LOCUS_00410	sequence001:33623..34003(+)	frameshift		33620	WP_001106104.1	glycosyltransferase	96.8	25.2	38.4
MGA_45	LOCUS_00450	sequence001:36326..37003(-)	partial			WP_011254381.1	YSIRK-type signal peptide-containing protein	92.0	52.0	29.7
MGA_56	LOCUS_00560	sequence001:49109..49717(+)	frameshift,internal_stop_codon	49081..49083(+),48916..48918(+)	48978,49068	WP_003547045.1	aldo/keto reductase	96.5	72.0	77.4
MGA_58	LOCUS_00580	sequence001:50766..51563(+)	internal_stop_codon	50643..50645(+)		WP_011254294.1	2-hydroxyacid dehydrogenase family protein	100.0	82.6	81.1
MGA_101	LOCUS_01010	sequence001:96057..96365(+)	frameshift		96344	WP_015613355.1	PTS transporter subunit EIIC	95.1	23.0	84.5
MGA_102	LOCUS_01020	sequence001:96349..97329(+)	frameshift		96344	WP_015613355.1	PTS transporter subunit EIIC	100.0	77.3	80.1
MGA_114	LOCUS_01140	sequence001:106364..107080(+)	internal_stop_codon	107078..107080(+)		WP_003547166.1	putative ornithine decarboxylase	77.7	26.5	74.6
MGA_115	LOCUS_01150	sequence001:107099..108616(+)	internal_stop_codon	107078..107080(+)		WP_003547166.1	putative ornithine decarboxylase	100.0	72.5	92.1
MGA_137	LOCUS_01370	sequence001:130593..131021(+)	partial			WP_003548046.1	M57 family metalloprotease	97.9	53.2	30.1
MGA_162	LOCUS_01620	sequence002:20839..21018(-)	frameshift		21020	WP_012775247.1	DUF3955 domain-containing protein	100.0	37.3	50.8
MGA_163	LOCUS_01630	sequence002:21018..21311(-)	frameshift		21020	WP_012775247.1	DUF3955 domain-containing protein	100.0	61.4	56.7
MGA_173	LOCUS_01720	sequence002:29469..30197(-)	partial			WP_011475678.1	ISL3 family transposase	91.3	51.5	50.2
MGA_178	LOCUS_01770	sequence002:35241..35552(-)	frameshift		35629	WP_003548496.1	TetR/AcrR family transcriptional regulator	66.0	49.3	61.8
MGA_208	LOCUS_02030	sequence008:120..851(-)	internal_stop_codon	120..122(-)		WP_010956682.1	IS30-like element ISTde2 family transposase	59.7	39.7	37.1
MGA_210	LOCUS_02050	sequence010:1..737(+)	partial			WP_011460717.1	IS4 family transposase	98.8	51.2	33.2
MGA_213	LOCUS_02060	sequence013:132..1142(+)	frameshift		1025	WP_003549134.1	CoA transferase	90.8	77.2	92.8
MGA_214	LOCUS_02070	sequence013:1100..1318(+)	frameshift		1028	WP_003549134.1	CoA transferase	100.0	18.2	93.1
MGA_239	LOCUS_02320	sequence013:17958..18443(-)	frameshift		18601	WP_003549103.1	AEC family transporter	100.0	41.0	81.4
MGA_240	LOCUS_02330	sequence013:18548..19132(-)	frameshift		18604	WP_003549103.1	AEC family transporter	91.2	45.5	94.4
MGA_247	LOCUS_02400	sequence013:24524..24823(-)	frameshift		24845	WP_011254482.1	RNA-guided endonuclease TnpB family protein	100.0	25.7	84.8
MGA_248	LOCUS_02410	sequence013:24774..25463(-)	frameshift		25456,24844	WP_011254472.1	RNA-guided endonuclease TnpB family protein	89.5	53.2	84.4
MGA_249	LOCUS_02420	sequence013:25427..25669(-)	frameshift		25456	WP_011254133.1	RNA-guided endonuclease TnpB family protein	87.5	18.2	91.4
MGA_283	LOCUS_02750	sequence015:61..>686(-)	partial			WP_011460717.1	IS4 family transposase	98.1	44.0	30.9
MGA_291	LOCUS_02780	sequence021:5042..5626(+)	partial			WP_004046647.1	zinc-dependent alcohol dehydrogenase family protein	100.0	56.1	87.6
MGA_292	LOCUS_02790	sequence021:5813..5986(+)	frameshift		5983	WP_011674825.1	SDR family oxidoreductase	96.5	26.3	61.4
MGA_293	LOCUS_02800	sequence021:5973..6476(+)	frameshift		5983	WP_011674825.1	SDR family oxidoreductase	99.4	74.2	50.6
MGA_295	LOCUS_02820	sequence021:7137..8027(+)	partial			WP_003547458.1	APC family permease	100.0	64.9	84.8
MGA_315	LOCUS_03020	sequence021:30636..31181(-)	partial			WP_011254347.1	Fic family protein	53.6	79.8	72.7
MGA_318	LOCUS_03050	sequence021:31839..32900(-)	frameshift		32901	WP_003547496.1	ABC transporter ATP-binding protein	98.6	66.6	89.5
MGA_319	LOCUS_03060	sequence021:32890..33426(-)	frameshift		32901	WP_003547496.1	ABC transporter ATP-binding protein	98.3	33.2	84.6
MGA_353	LOCUS_03400	sequence022:25403..25750(+)	frameshift		25732	WP_065989431.1	ribose-5-phosphate isomerase A	84.3	42.7	59.8
MGA_354	LOCUS_03410	sequence022:25747..26115(+)	frameshift		25741	WP_011476337.1	ribose-5-phosphate isomerase A	98.4	53.3	45.0
MGA_355	LOCUS_03420	sequence022:26112..26957(+)	frameshift		26798	WP_011674856.1	Gfo/Idh/MocA family oxidoreductase	88.3	76.1	69.8
MGA_356	LOCUS_03430	sequence022:26975..27100(+)	frameshift		26798	WP_013438056.1	hypothetical protein	100.0	27.0	97.6
MGA_363	LOCUS_03500	sequence022:31961..32407(-)	frameshift		32475,32414	WP_003640299.1	replication-associated recombination protein A	90.5	29.8	56.0
MGA_364	LOCUS_03510	sequence022:32437..32778(-)	frameshift		32474,32828,32413	WP_003640299.1	replication-associated recombination protein A	89.4	24.1	61.1
MGA_365	LOCUS_03520	sequence022:32772..33167(-)	frameshift		32828	WP_003640299.1	replication-associated recombination protein A	86.3	34.7	52.2
MGA_401	LOCUS_03880	sequence023:10182..10874(-)	partial			WP_012047652.1	LysM peptidoglycan-binding domain-containing protein	53.9	56.0	31.7
MGA_402	LOCUS_03890	sequence023:10887..13640(-)	partial			WP_010922222.1	tape measure protein	55.0	40.5	35.5
MGA_418	LOCUS_04050	sequence023:24509..24925(-)	frameshift		24941	WP_010989482.1	site-specific DNA-methyltransferase	99.3	66.5	50.0
MGA_437	LOCUS_04240	sequence023:33610..34374(-)	partial			WP_125080931.1	AAA family ATPase	78.3	32.9	30.2
MGA_439	LOCUS_04260	sequence023:34738..35307(-)	partial			WP_010922065.1	hypothetical protein	84.7	71.8	43.1
MGA_450	LOCUS_04370	sequence023:39944..40735(+)	partial			WP_011475904.1	Ltp family lipoprotein	43.7	55.1	51.3
MGA_480	LOCUS_04670	sequence024:24167..24607(-)	frameshift		24624	WP_011254424.1	DUF2207 domain-containing protein	77.4	18.9	71.7
MGA_493	LOCUS_04800	sequence024:37945..38343(+)	partial			WP_010956682.1	IS30-like element ISTde2 family transposase	70.5	27.7	41.4
MGA_515	LOCUS_05010	sequence025:23678..23851(-)	internal_stop_codon	23954..23956(-)		WP_015613302.1	hypothetical protein	100.0	34.3	89.5
MGA_516	LOCUS_05020	sequence025:24253..24975(-)	partial			WP_003548412.1	SLAP domain-containing protein	89.2	29.8	29.1
MGA_524	LOCUS_05100	sequence025:34626..34865(+)	internal_stop_codon	34863..34865(+)		WP_044304031.1	oxalyl-CoA decarboxylase	98.7	13.4	83.3
MGA_525	LOCUS_05110	sequence025:34923..36338(+)	internal_stop_codon	34863..34865(+)		WP_044304031.1	oxalyl-CoA decarboxylase	100.0	80.9	90.7
MGA_559	LOCUS_05450	sequence026:28701..28925(+)	partial			WP_003549725.1	bacteriocin immunity protein	100.0	69.2	71.6
MGA_587	LOCUS_05730	sequence027:23141..23650(+)	frameshift		23617	WP_003547799.1	ATP-binding cassette domain-containing protein	95.9	32.2	83.3
MGA_588	LOCUS_05740	sequence027:23644..24036(+)	frameshift		24016,23638,23623	WP_003547799.1	ATP-binding cassette domain-containing protein	95.4	24.1	59.7
MGA_589	LOCUS_05750	sequence027:24023..24661(+)	frameshift		24015	WP_003547799.1	ATP-binding cassette domain-containing protein	100.0	42.1	82.1
MGA_621	LOCUS_06070	sequence028:22336..22977(-)	partial			WP_003548592.1	helix-turn-helix transcriptional regulator	91.5	72.0	91.8
MGA_632	LOCUS_06180	sequence028:33646..33867(+)	partial			WP_003562902.1	hypothetical protein	80.8	72.5	50.8
MGA_653	LOCUS_06390	sequence029:19873..20286(+)	frameshift		19873,20029,20086	WP_003546414.1	CPBP family intramembrane metalloprotease	95.6	33.0	47.3
MGA_725	LOCUS_07110	sequence029:93015..93167(+)	frameshift		93158	WP_011254224.1	1,4-alpha-glucan branching protein GlgB	96.0	7.5	66.7
MGA_726	LOCUS_07120	sequence029:93178..93921(+)	partial			WP_003546577.1	glycogen/starch/alpha-glucan phosphorylase	93.1	28.6	87.0
MGA_737	LOCUS_07230	sequence029:108592..109602(-)	frameshift		109675	WP_003546599.1	amino acid permease	100.0	70.3	89.6
MGA_738	LOCUS_07240	sequence029:109664..110026(-)	frameshift		109675	WP_003546599.1	amino acid permease	99.2	24.9	95.0
MGA_743	LOCUS_07290	sequence030:3313..3903(+)	partial			WP_104859673.1	IS256 family transposase	71.9	35.7	46.8
MGA_755	LOCUS_07410	sequence030:14557..15093(+)	frameshift,internal_stop_codon	14473..14475(+),14476..14478(+)	14997	WP_068990772.1	IS66-like element short variant transposase	81.5	32.2	60.0
MGA_756	LOCUS_07420	sequence030:15077..15472(+)	frameshift		14997	WP_068990772.1	IS66-like element short variant transposase	100.0	28.9	72.0
MGA_757	LOCUS_07430	sequence030:15702..16997(-)	partial			WP_002326842.1	LTA synthase family protein	97.9	47.3	46.4
MGA_776	LOCUS_07610	sequence031:3232..4062(-)	partial			WP_011241729.1	replication initiator protein A	72.1	54.0	84.9
MGA_805	LOCUS_07900	sequence032:6195..6671(-)	frameshift,internal_stop_codon	6192..6194(-),6783..6785(-)	6786,6707,6900,6734	WP_003549250.1	amino acid permease	100.0	32.9	85.4
MGA_806	LOCUS_07910	sequence032:6784..7110(-)	frameshift,internal_stop_codon	6783..6785(-)	6786,6707,6900,6734	WP_003549250.1	amino acid permease	58.3	13.1	93.7
MGA_810	LOCUS_07950	sequence032:10566..11321(+)	frameshift,internal_stop_codon	11320..11322(+)	10560	WP_056938137.1	endonuclease	100.0	68.4	97.2
MGA_850	LOCUS_08340	sequence033:21817..22200(-)	internal_stop_codon	22219..22221(-)		WP_003546396.1	ABC transporter ATP-binding protein	100.0	21.7	90.6
MGA_851	LOCUS_08350	sequence033:22219..23544(-)	internal_stop_codon	22219..22221(-)		WP_003546396.1	ABC transporter ATP-binding protein	99.1	74.9	73.1
MGA_856	LOCUS_08400	sequence033:27448..28107(+)	internal_stop_codon	28148..28150(+)		WP_003546900.1	SH3-like domain-containing protein	100.0	44.9	80.7
MGA_877	LOCUS_08610	sequence034:23334..23648(+)	internal_stop_codon	23106..23108(+),23220..23222(+)		WP_011475462.1	GRP family sugar transporter	98.1	35.4	45.1
MGA_885	LOCUS_08690	sequence035:1132..1509(-)	internal_stop_codon	1579..1581(-)		WP_010921993.1	coenzyme F420-0:L-glutamate ligase	100.0	53.7	50.4
MGA_888	LOCUS_08720	sequence035:2456..2887(-)	frameshift,internal_stop_codon	2924..2926(-)	2936,2979	WP_025080575.1	alpha/beta hydrolase	100.0	48.0	65.7
MGA_889	LOCUS_08730	sequence035:2935..3348(-)	frameshift,internal_stop_codon	2924..2926(-)	2985,2939	WP_025080575.1	alpha/beta hydrolase	79.6	36.2	53.2
MGA_894	LOCUS_08780	sequence035:6224..6577(-)	partial			WP_010905121.1	TMEM175 family protein	90.6	32.0	26.4
MGA_895	LOCUS_08790	sequence035:6667..6912(-)	partial			WP_003547292.1	aldo/keto reductase	96.3	27.0	93.6
MGA_901	LOCUS_08850	sequence035:11661..12161(-)	partial			WP_003703249.1	type I 3-dehydroquinate dehydratase	97.6	64.3	51.2
MGA_902	LOCUS_08860	sequence035:12210..12683(+)	partial			WP_009890955.1	LysR family transcriptional regulator	80.3	43.0	38.1
MGA_903	LOCUS_08870	sequence035:12676..13560(-)	internal_stop_codon	12676..12678(-),13735..13737(-),13774..13776(-)		WP_011254026.1	IS1182 family transposase	99.7	50.9	81.9
MGA_904	LOCUS_08880	sequence035:13993..14364(-)	internal_stop_codon	13993..13995(-),13735..13737(-),13774..13776(-)		WP_011254613.1	IS1182-like element ISLac1 family transposase	99.2	24.9	84.0
MGA_905	LOCUS_08890	sequence035:14520..16277(-)	partial			WP_003643070.1	FAD-dependent oxidoreductase	96.8	74.3	54.0
MGA_907	LOCUS_08910	sequence035:17287..17538(-)	partial			WP_002262242.1	zinc-binding alcohol dehydrogenase family protein	86.7	22.5	41.7
MGA_912	LOCUS_08960	sequence035:23854..24204(-)	partial			WP_000822763.1	replication initiator protein A	76.7	34.4	33.7
MGA_915	LOCUS_08990	sequence036:810..1178(+)	internal_stop_codon	1335..1337(+),1176..1178(+)		WP_003547735.1	peptide ABC transporter substrate-binding protein	42.6	9.6	88.5
MGA_916	LOCUS_09000	sequence036:1353..2000(+)	internal_stop_codon	1335..1337(+),1176..1178(+)		WP_003547735.1	peptide ABC transporter substrate-binding protein	95.8	39.6	82.2
MGA_921	LOCUS_09050	sequence036:5752..6333(-)	frameshift		6575	WP_003547730.1	aspartate kinase	95.9	40.8	94.1
MGA_922	LOCUS_09060	sequence036:6555..6791(-)	frameshift		6574,6823	WP_003547730.1	aspartate kinase	91.0	16.6	81.3
MGA_923	LOCUS_09070	sequence036:6809..7042(-)	frameshift		6574,6823	WP_003547730.1	aspartate kinase	94.8	16.1	80.8
MGA_925	LOCUS_09090	sequence036:8672..8917(+)	frameshift		8890	WP_003547725.1	homoserine dehydrogenase	91.4	18.0	78.4
MGA_926	LOCUS_09100	sequence036:8895..9218(+)	frameshift		8890,9116,9431	WP_003547725.1	homoserine dehydrogenase	94.4	24.6	73.3
MGA_927	LOCUS_09110	sequence036:9215..9502(+)	frameshift		9116,9431	WP_003547725.1	homoserine dehydrogenase	87.4	20.2	71.1
MGA_928	LOCUS_09120	sequence036:9520..9732(+)	frameshift		9430	WP_003547725.1	homoserine dehydrogenase	100.0	24.9	58.8
MGA_929	LOCUS_09130	sequence036:9754..10041(+)	frameshift		10020	WP_003547723.1	homoserine kinase	94.7	31.4	90.0
MGA_930	LOCUS_09140	sequence036:10065..10616(+)	frameshift		10020	WP_003547723.1	homoserine kinase	100.0	63.8	84.7
MGA_946	LOCUS_09300	sequence036:22969..23163(+)	frameshift		23115	WP_011476029.1	Nramp family divalent metal transporter	75.0	9.2	64.6
MGA_947	LOCUS_09310	sequence036:23157..24065(+)	frameshift		23115,24054	WP_011476029.1	Nramp family divalent metal transporter	95.7	55.5	66.8
MGA_948	LOCUS_09320	sequence036:24062..24502(+)	frameshift		24053	WP_002382010.1	Nramp family divalent metal transporter	89.7	25.8	46.7
MGA_961	LOCUS_09450	sequence037:13415..13660(+)	frameshift		13633	WP_021721265.1	TMEM175 family protein	91.4	46.8	58.5
MGA_962	LOCUS_09460	sequence037:13660..13959(+)	frameshift		13633	WP_021721265.1	TMEM175 family protein	99.0	48.8	68.4
MGA_966	LOCUS_09500	sequence037:16861..17625(-)	partial			WP_003548923.1	helix-turn-helix transcriptional regulator	92.5	72.3	72.0
MGA_969	LOCUS_09530	sequence037:20388..21827(+)	frameshift		21803	WP_008766276.1	Eco57I restriction-modification methylase domain-containing protein	96.9	40.4	38.3
MGA_970	LOCUS_09540	sequence037:21830..23971(+)	frameshift		21803	WP_008766276.1	Eco57I restriction-modification methylase domain-containing protein	77.1	47.9	35.3
MGA_973	LOCUS_09570	sequence038:1014..1223(-)	partial			WP_009930477.1	aldo/keto reductase	76.8	16.3	55.6
MGA_978	LOCUS_09620	sequence038:3564..4649(+)	partial			WP_005895105.1	YfcC family protein	95.6	68.3	50.1
MGA_979	LOCUS_09630	sequence038:4800..5120(+)	frameshift		5090	WP_002288985.1	MFS transporter	77.4	20.7	64.6
MGA_980	LOCUS_09640	sequence038:5095..6030(+)	frameshift		5090	WP_002288985.1	MFS transporter	98.7	76.3	53.4
MGA_981	LOCUS_09650	sequence038:6095..7276(-)	partial			WP_014565478.1	SLAP domain-containing protein	54.5	55.7	30.6
MGA_988	LOCUS_09720	sequence038:12907..13944(+)	partial			WP_011476405.1	C39 family peptidase	69.3	27.0	51.9
MGA_989	LOCUS_09730	sequence038:14022..14435(+)	frameshift		14393	WP_011108877.1	ATP-binding protein	89.1	30.2	48.4
MGA_990	LOCUS_09740	sequence038:14404..15213(+)	frameshift		14393	WP_005693372.1	ATP-binding protein	99.3	66.8	48.7
MGA_1001	LOCUS_09840	sequence039:4024..4200(-)	frameshift,internal_stop_codon	3927..3929(-)	3905,3977,4044	WP_003548046.1	M57 family metalloprotease	89.7	23.4	57.7
MGA_1002	LOCUS_09850	sequence039:4241..4744(-)	frameshift		4794	WP_011254446.1	ClC family H(+)/Cl(-) exchange transporter	98.2	36.6	88.4
MGA_1003	LOCUS_09860	sequence039:4741..5385(-)	frameshift		4794	WP_011254446.1	ClC family H(+)/Cl(-) exchange transporter	92.1	44.0	80.2
MGA_1005	LOCUS_09880	sequence039:8551..9777(+)	partial			WP_003546414.1	CPBP family intramembrane metalloprotease	68.1	67.0	33.3
MGA_1044	LOCUS_10270	sequence040:31067..31468(-)	internal_stop_codon	31511..31513(-)		WP_051523200.1	helix-turn-helix transcriptional regulator	100.0	76.4	94.0
MGA_1054	LOCUS_10370	sequence040:41828..41980(+)	partial			WP_003706303.1	teichoic acid D-Ala incorporation-associated protein DltX	70.0	71.4	68.6
MGA_1061	LOCUS_10440	sequence040:48107..48679(+)	internal_stop_codon	48017..48019(+)		WP_011254619.1	DUF975 family protein	100.0	84.4	87.9
MGA_1072	LOCUS_10550	sequence040:61550..62038(+)	internal_stop_codon	62036..62038(+)		WP_003549562.1	amino acid permease	91.4	33.0	87.8
MGA_1073	LOCUS_10560	sequence040:62051..62944(+)	internal_stop_codon	62036..62038(+)		WP_003549562.1	amino acid permease	98.7	65.3	86.0
MGA_1096	LOCUS_10790	sequence040:84582..84959(+)	frameshift		84902	WP_003548701.1	helix-turn-helix transcriptional regulator	83.2	39.0	36.2
MGA_1111	LOCUS_10940	sequence041:195..3509(-)	partial			WP_004399367.1	P-loop NTPase fold protein	41.8	32.6	26.4
MGA_1118	LOCUS_11010	sequence041:8232..9224(-)	partial			WP_011201897.1	glycosyltransferase family 2 protein	74.8	65.7	37.9
MGA_1119	LOCUS_11020	sequence041:9249..10247(-)	partial			WP_005816707.1	glycosyltransferase family A protein	73.8	69.7	30.2
MGA_1123	LOCUS_11060	sequence041:13576..14142(-)	partial			WP_011261028.1	acyltransferase	77.7	71.4	44.7
MGA_1179	LOCUS_11600	sequence044:9575..9766(-)	partial			WP_003549835.1	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	100.0	42.6	92.1
MGA_1203	LOCUS_11830	sequence045:14188..14565(+)	frameshift		14556	WP_011254164.1	ammonium transporter	99.2	29.8	92.7
MGA_1204	LOCUS_11840	sequence045:14570..15439(+)	frameshift		14559	WP_011254164.1	ammonium transporter	100.0	69.5	87.9
MGA_1207	LOCUS_11870	sequence045:16733..17278(+)	partial			WP_000656771.1	TetR/AcrR family transcriptional regulator	50.8	47.8	40.4
MGA_1208	LOCUS_11880	sequence046:519..1454(+)	frameshift		274	WP_005813994.1	MFS transporter	98.1	77.0	33.2
MGA_1212	LOCUS_11920	sequence046:5311..6141(-)	partial			WP_188891678.1	amidohydrolase family protein	31.2	21.4	84.9
MGA_1213	LOCUS_11930	sequence046:6276..6677(-)	partial			WP_011102270.1	LacI family DNA-binding transcriptional regulator	51.9	19.5	55.1
MGA_1216	LOCUS_11960	sequence046:9972..10385(-)	frameshift		10392	WP_011254471.1	PTS sugar transporter subunit IIA	100.0	21.4	81.0
MGA_1217	LOCUS_11970	sequence046:10357..10899(-)	frameshift		10392,10954	WP_011254471.1	PTS sugar transporter subunit IIA	93.9	26.4	82.2
MGA_1218	LOCUS_11980	sequence046:10943..11620(-)	frameshift		11616,10953	WP_011254471.1	PTS sugar transporter subunit IIA	98.2	34.6	93.7
MGA_1219	LOCUS_11990	sequence046:11581..11883(-)	frameshift		11616	WP_011254471.1	PTS sugar transporter subunit IIA	89.0	13.9	95.5
MGA_1225	LOCUS_12040	sequence047:42..527(-)	partial			WP_011476555.1	helix-turn-helix domain-containing protein	91.3	44.5	40.6
MGA_1226	LOCUS_12050	sequence047:776..1366(+)	frameshift		704,1330	WP_095342080.1	NAD(P)-dependent alcohol dehydrogenase	100.0	49.9	70.9
MGA_1227	LOCUS_12060	sequence047:1321..1629(+)	frameshift		1330	WP_095342080.1	NAD(P)-dependent alcohol dehydrogenase	100.0	27.3	92.2
MGA_1235	LOCUS_12140	sequence047:6509..6898(+)	frameshift		6847	WP_011254277.1	hypothetical protein	96.1	73.8	66.9
MGA_1236	LOCUS_12150	sequence047:6867..7043(+)	frameshift		6847	WP_011254277.1	hypothetical protein	93.1	31.0	61.1
MGA_1260	LOCUS_12390	sequence048:12084..12632(+)	internal_stop_codon	12009..12011(+)		WP_010989346.1	alpha/beta hydrolase	91.8	45.8	28.8
MGA_1292	LOCUS_12710	sequence051:961..1143(-)	frameshift		1373	WP_004039686.1	methylated-DNA--[protein]-cysteine S-methyltransferase	93.3	32.6	64.3
MGA_1340	LOCUS_13190	sequence051:52468..52626(+)	partial			WP_011254604.1	RNA-guided endonuclease TnpB family protein	98.1	17.2	82.4
MGA_1341	LOCUS_13200	sequence051:52758..53456(+)	partial			WP_011254604.1	RNA-guided endonuclease TnpB family protein	95.3	74.4	76.5
MGA_1347	LOCUS_13260	sequence051:57056..57469(-)	partial			WP_003548787.1	hypothetical protein	40.1	37.6	51.8
MGA_1354	LOCUS_13330	sequence051:62980..64488(-)	partial			WP_011254066.1	SLAP domain-containing protein	71.1	70.9	27.3
MGA_1397	LOCUS_13760	sequence052:12467..>13119(-)	partial			WP_011254576.1	peptide cleavage/export ABC transporter	87.0	26.1	96.3
MGA_1401	LOCUS_13800	sequence053:4023..4985(+)	partial			WP_161269931.1	glycoside hydrolase family 43 protein	86.2	54.6	40.2
MGA_1404	LOCUS_13830	sequence053:9119..9601(+)	frameshift,internal_stop_codon	9599..9601(+)	9871	WP_011254604.1	RNA-guided endonuclease TnpB family protein	78.1	42.1	79.2
MGA_1405	LOCUS_13840	sequence053:9683..9901(+)	frameshift,internal_stop_codon	9599..9601(+)	9871	WP_011254604.1	RNA-guided endonuclease TnpB family protein	95.8	23.2	82.6
MGA_1407	LOCUS_13860	sequence053:10406..11278(+)	frameshift		11179	WP_011475674.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	89.7	66.8	63.6
MGA_1408	LOCUS_13870	sequence053:11221..11577(+)	frameshift		11179	WP_011475674.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	96.6	29.2	72.8
MGA_1409	LOCUS_13880	sequence053:11836..12186(+)	partial			WP_003549857.1	BspA family leucine-rich repeat surface protein	94.0	8.4	37.0
MGA_1429	LOCUS_14080	sequence055:10264..10581(+)	partial			WP_003547772.1	cysteine synthase A	94.3	33.0	90.2
MGA_1430	LOCUS_14090	sequence055:10658..10993(+)	partial			WP_003547773.1	MupG family TIM beta-alpha barrel fold protein	99.1	31.7	77.4
MGA_1432	LOCUS_14110	sequence055:11492..11860(-)	frameshift		11509	WP_011254394.1	GNAT family N-acetyltransferase	100.0	82.4	72.1
MGA_1433	LOCUS_14120	sequence056:58..576(-)	partial			WP_003548110.1	hypothetical protein	95.3	65.1	47.4
MGA_1444	LOCUS_14230	sequence056:10693..11265(-)	frameshift		11323	WP_011254513.1	serine hydrolase domain-containing protein	95.8	53.4	69.9
MGA_1445	LOCUS_14240	sequence056:11315..11725(-)	frameshift		11323	WP_011254513.1	serine hydrolase domain-containing protein	98.5	39.1	56.7
MGA_1450	LOCUS_14290	sequence057:3595..3972(-)	frameshift		4036	WP_011254160.1	LysR family transcriptional regulator	100.0	42.7	81.6
MGA_1451	LOCUS_14300	sequence057:4034..4477(-)	frameshift		4036	WP_011254160.1	LysR family transcriptional regulator	100.0	50.2	91.2
MGA_1469	LOCUS_14480	sequence058:10030..10941(+)	partial			WP_014565478.1	SLAP domain-containing protein	85.1	71.6	43.3
MGA_1470	LOCUS_14490	sequence058:11073..11480(+)	partial			WP_014565478.1	SLAP domain-containing protein	88.9	29.4	43.3
MGA_1481	LOCUS_14590	sequence060:134..568(+)	internal_stop_codon	566..568(+)		WP_003546242.1	PTS sugar transporter subunit IIC	100.0	41.5	77.1
MGA_1482	LOCUS_14600	sequence060:611..1174(+)	internal_stop_codon	566..568(+)		WP_003546242.1	PTS sugar transporter subunit IIC	99.5	53.9	74.9
MGA_1485	LOCUS_14630	sequence060:3663..4778(-)	internal_stop_codon	3663..3665(-)		WP_003564452.1	Y-family DNA polymerase	99.7	83.9	52.6
MGA_1493	LOCUS_14700	sequence061:173..604(+)	partial			WP_012804173.1	restriction endonuclease	95.1	45.2	47.8
MGA_1494	LOCUS_14710	sequence061:802..1083(+)	internal_stop_codon	772..774(+)		WP_011254453.1	ASCH domain-containing protein	94.6	71.5	84.1
MGA_1495	LOCUS_14720	sequence061:1385..1729(+)	frameshift,internal_stop_codon	1727..1729(+)	1762	WP_029779742.1	NAD(P)H-binding protein	100.0	53.0	79.8
MGA_1496	LOCUS_14730	sequence061:1795..2022(+)	frameshift,internal_stop_codon	1727..1729(+)	1762	WP_029779742.1	NAD(P)H-binding protein	98.7	34.4	82.4
MGA_1504	LOCUS_14810	sequence061:9128..9307(-)	partial			WP_003548061.1	metal-sulfur cluster assembly factor	64.4	36.5	78.9
MGA_1519	LOCUS_14960	sequence062:14732..15034(-)	partial			WP_003221463.1	YggT family protein	74.0	77.8	39.5
MGA_1540	LOCUS_15170	sequence062:35400..35822(-)	partial			WP_010956682.1	IS30-like element ISTde2 family transposase	92.1	37.7	42.2
MGA_1573	LOCUS_15500	sequence062:64181..64777(-)	partial			WP_011476487.1	helix-turn-helix transcriptional regulator	30.8	22.8	49.2
MGA_1596	LOCUS_15730	sequence063:2142..2612(-)	frameshift,internal_stop_codon	2688..2690(-)	2769,2171	WP_015613384.1	membrane protein	94.2	48.2	72.8
MGA_1597	LOCUS_15740	sequence063:2737..2886(-)	frameshift,internal_stop_codon	2688..2690(-)	2769	WP_015613384.1	membrane protein	79.6	13.8	83.3
MGA_1604	LOCUS_15810	sequence064:1107..1823(+)	partial			WP_011476487.1	helix-turn-helix transcriptional regulator	93.3	74.2	26.7
MGA_1609	LOCUS_15860	sequence064:6860..7321(-)	partial			WP_011241729.1	replication initiator protein A	94.8	39.5	92.4
MGA_1614	LOCUS_15910	sequence065:1856..2317(+)	frameshift		2305	WP_003702509.1	nitroreductase family protein	95.4	68.2	63.7
MGA_1615	LOCUS_15920	sequence065:2340..2501(+)	frameshift		2305	WP_003702509.1	nitroreductase family protein	100.0	24.3	52.8
MGA_1622	LOCUS_15990	sequence065:8629..8757(+)	partial			WP_003546304.1	heavy metal translocating P-type ATPase	95.2	6.3	55.0
MGA_1637	LOCUS_16120	sequence067:3661..4062(-)	partial			WP_003548241.1	hypothetical protein	49.6	19.6	43.3
MGA_1638	LOCUS_16130	sequence067:4195..4491(-)	frameshift		4499	WP_003547395.1	choloylglycine hydrolase	99.0	29.8	73.2
MGA_1639	LOCUS_16140	sequence067:4494..4958(-)	partial			WP_011254447.1	GNAT family N-acetyltransferase	66.2	59.4	52.0
MGA_1643	LOCUS_16180	sequence067:6536..7171(-)	internal_stop_codon	7244..7246(-)		WP_003546304.1	heavy metal translocating P-type ATPase	99.5	33.2	76.2
MGA_1644	LOCUS_16190	sequence067:7244..8311(-)	internal_stop_codon	7244..7246(-)		WP_003546304.1	heavy metal translocating P-type ATPase	99.7	55.9	79.4
MGA_1655	LOCUS_16280	sequence068:5327..5671(+)	partial			WP_005902513.1	single-stranded DNA-binding protein	97.4	74.7	38.5
MGA_1656	LOCUS_16290	sequence068:5916..6959(+)	partial			WP_009966621.1	DNA relaxase NicK	75.2	73.6	26.4
MGA_1691	LOCUS_16630	sequence073:65..235(-)	frameshift		127	WP_011254613.1	IS1182-like element ISLac1 family transposase	64.3	7.2	77.8
MGA_1692	LOCUS_16640	sequence073:393..1982(-)	partial			WP_003548412.1	SLAP domain-containing protein	99.6	68.6	28.3
MGA_1693	LOCUS_16650	sequence073:2120..2854(-)	internal_stop_codon	2876..2878(-),3017..3019(-)		WP_003548236.1	DHA2 family efflux MFS transporter permease subunit	99.6	51.8	84.0
MGA_1694	LOCUS_16660	sequence073:3017..3529(-)	internal_stop_codon	2876..2878(-),3017..3019(-)		WP_003548236.1	DHA2 family efflux MFS transporter permease subunit	100.0	36.2	92.9
MGA_1720	LOCUS_16920	sequence073:28721..29743(-)	partial			WP_011254489.1	HAMP domain-containing histidine kinase	98.2	64.0	86.0
MGA_1742	LOCUS_17130	sequence073:49325..50548(+)	partial			WP_003548795.1	beta-N-acetylglucosaminidase AcmB	33.4	32.3	36.6
MGA_1752	LOCUS_17230	sequence073:61967..63199(-)	frameshift		63201	WP_003548364.1	amidophosphoribosyltransferase	99.8	84.9	94.9
MGA_1753	LOCUS_17240	sequence073:63106..63408(-)	frameshift		63204	WP_003548364.1	amidophosphoribosyltransferase	69.0	14.9	94.4
MGA_1768	LOCUS_17390	sequence074:253..1047(+)	partial			WP_000475574.1	FtsK/SpoIIIE domain-containing protein	89.0	54.3	33.9
MGA_1776	LOCUS_17470	sequence075:1647..1940(-)	frameshift		1957	WP_011254231.1	beta-glucoside-specific PTS transporter subunit IIABC	100.0	14.6	79.4
MGA_1777	LOCUS_17480	sequence075:1940..2854(-)	frameshift		1957	WP_011254231.1	beta-glucoside-specific PTS transporter subunit IIABC	98.4	45.4	89.0
MGA_1778	LOCUS_17490	sequence075:3110..3436(-)	frameshift		2918,3166	WP_011254231.1	beta-glucoside-specific PTS transporter subunit IIABC	83.3	13.6	94.4
MGA_1779	LOCUS_17500	sequence075:3564..3947(-)	frameshift		3960,4005	WP_003546647.1	PRD domain-containing protein	100.0	45.4	88.2
MGA_1780	LOCUS_17510	sequence075:4003..4401(-)	frameshift		3963,4011	WP_003546647.1	PRD domain-containing protein	100.0	47.5	82.0
MGA_1807	LOCUS_17780	sequence080:216..359(+)	partial			WP_003548110.1	hypothetical protein	100.0	18.7	72.3
MGA_1825	LOCUS_17960	sequence083:1708..1908(+)	partial			WP_011254009.1	hypothetical protein	59.1	37.3	69.2
MGA_1828	LOCUS_17990	sequence083:3661..4509(-)	partial			WP_011038665.1	restriction endonuclease	92.6	62.9	38.0
MGA_1843	LOCUS_18130	sequence084:17895..18953(-)	partial			WP_002379387.1	ThiF family adenylyltransferase	67.9	63.4	31.6
MGA_1860	LOCUS_18300	sequence084:30373..31080(+)	partial			WP_004255227.1	biotin--[acetyl-CoA-carboxylase] ligase	98.3	74.6	40.2
MGA_1861	LOCUS_18310	sequence084:31311..32276(+)	internal_stop_codon	32274..32276(+)		WP_003548485.1	mucus-binding protein	100.0	49.9	59.0
MGA_1862	LOCUS_18320	sequence084:32391..33143(+)	internal_stop_codon	32274..32276(+)		WP_003548485.1	mucus-binding protein	99.6	43.7	46.4
MGA_1874	LOCUS_18430	sequence084:43293..43724(-)	partial			WP_003549430.1	Crp/Fnr family transcriptional regulator	98.6	65.0	58.2
MGA_1876	LOCUS_18450	sequence084:44071..44223(+)	frameshift		44211	WP_003548076.1	GyrI-like domain-containing protein	98.0	23.6	67.3
MGA_1877	LOCUS_18460	sequence084:44210..44710(+)	frameshift		44211	WP_003548076.1	GyrI-like domain-containing protein	95.2	76.0	70.3
MGA_1878	LOCUS_18470	sequence084:44703..45065(+)	frameshift		45038	WP_002263633.1	DHA2 family efflux MFS transporter permease subunit	92.5	24.4	34.2
MGA_1879	LOCUS_18480	sequence084:45058..45462(+)	frameshift		45417,45038	WP_011101592.1	DHA2 family efflux MFS transporter permease subunit	91.0	26.3	35.2
MGA_1880	LOCUS_18490	sequence084:45459..46076(+)	frameshift		45420	WP_011101592.1	DHA2 family efflux MFS transporter permease subunit	93.7	42.2	34.7
MGA_1884	LOCUS_18530	sequence084:48149..48568(+)	frameshift		48532,48574	WP_011101519.1	UbiA family prenyltransferase	97.1	44.6	55.1
MGA_1885	LOCUS_18540	sequence084:48656..49051(+)	frameshift		48532,48574	WP_011101519.1	UbiA family prenyltransferase	96.9	41.6	44.1
MGA_1889	LOCUS_18580	sequence084:51958..52227(+)	partial			WP_003546204.1	peptidoglycan-binding protein	97.8	41.1	51.5
MGA_1894	LOCUS_18630	sequence084:55994..56623(-)	frameshift		56083	WP_004454143.1	LysR family transcriptional regulator	92.8	68.2	32.5
MGA_1895	LOCUS_18640	sequence084:56737..57060(+)	internal_stop_codon	57139..57141(+),57058..57060(+)		WP_002329655.1	ACP S-malonyltransferase	96.3	36.0	35.8
MGA_1897	LOCUS_18660	sequence084:57841..58128(-)	frameshift		58150	WP_011254508.1	MIP/aquaporin family protein	100.0	38.0	95.8
MGA_1922	LOCUS_18890	sequence086:3825..4097(+)	frameshift		3819	WP_003547992.1	ABC transporter ATP-binding protein	96.7	16.5	63.2
MGA_1925	LOCUS_18910	sequence087:1703..2035(+)	partial			WP_011948530.1	MerR family transcriptional regulator	86.4	21.3	49.0
MGA_1929	LOCUS_18940	sequence088:106..549(-)	frameshift,internal_stop_codon	767..769(-)	688	WP_005693372.1	ATP-binding protein	96.6	35.0	49.3
MGA_1930	LOCUS_18950	sequence088:767..1072(-)	frameshift,internal_stop_codon	767..769(-)	688	WP_001106642.1	ATP-binding protein	93.1	23.4	43.6
MGA_1932	LOCUS_18970	sequence088:3165..3410(+)	internal_stop_codon	3078..3080(+)		WP_011254569.1	pyridoxamine 5'-phosphate oxidase family protein	100.0	66.9	91.4
MGA_1935	LOCUS_19000	sequence089:3045..>3763(-)	frameshift		3095	WP_000997694.1	IS256-like element ISLgar5 family transposase	93.3	56.1	51.8
MGA_1936	LOCUS_19010	sequence090:45..1694(-)	partial			WP_011254576.1	peptide cleavage/export ABC transporter	97.8	74.6	98.0
MGA_1938	LOCUS_19030	sequence090:2843..3100(-)	partial			WP_104859673.1	IS256 family transposase	96.5	21.1	54.9
MGA_1939	LOCUS_19040	sequence090:3090..>3628(-)	partial			WP_000997694.1	IS256-like element ISLgar5 family transposase	98.9	44.4	56.8
MGA_1948	LOCUS_19100	sequence093:494..1222(+)	partial			WP_003548412.1	SLAP domain-containing protein	88.4	28.7	28.6
MGA_1949	LOCUS_19110	sequence093:1279..1515(-)	internal_stop_codon	1516..1518(-)		WP_014565478.1	SLAP domain-containing protein	87.2	18.0	98.5
MGA_1950	LOCUS_19120	sequence093:1516..2289(-)	internal_stop_codon	2320..2322(-),1516..1518(-)		WP_014565478.1	SLAP domain-containing protein	100.0	68.2	87.5
MGA_1967	LOCUS_19270	sequence095:16284..16712(-)	partial			WP_003550051.1	DUF421 domain-containing protein	98.6	66.0	90.0
MGA_1968	LOCUS_19280	sequence095:16820..19690(-)	partial			WP_003550047.1	LPXTG cell wall anchor domain-containing protein	82.7	66.9	41.4
MGA_1972	LOCUS_19320	sequence095:23234..23824(-)	frameshift,internal_stop_codon	23930..23932(-),23294..23296(-)	23296	WP_011254533.1	PAS domain-containing protein	84.2	66.8	98.8
MGA_1977	LOCUS_19370	sequence095:29023..29382(+)	frameshift		29352	WP_011254536.1	PepSY domain-containing protein	88.2	57.2	75.2
MGA_1978	LOCUS_19380	sequence095:29370..29567(+)	frameshift		29352	WP_011254536.1	PepSY domain-containing protein	100.0	36.1	76.9
MGA_2006	LOCUS_19660	sequence095:53519..53803(+)	partial			WP_003549962.1	SEC10/PgrA surface exclusion domain-containing protein	100.0	33.6	93.6
MGA_2016	LOCUS_19760	sequence095:62836..63396(-)	frameshift		62838	WP_011861809.1	PTS sugar transporter subunit IIA	94.1	27.5	25.0
MGA_2022	LOCUS_19820	sequence095:67122..68357(-)	partial			WP_011104962.1	SIR2 family protein	66.9	84.0	27.2
MGA_2024	LOCUS_19840	sequence096:1619..2581(+)	frameshift		1589	WP_011254524.1	Rib/alpha-like domain-containing protein	56.9	9.2	30.6
MGA_2026	LOCUS_19860	sequence096:2866..3063(-)	frameshift		2808,2898	WP_002295354.1	LysR substrate-binding domain-containing protein	76.9	16.7	52.0
MGA_2029	LOCUS_19890	sequence097:1527..2738(+)	partial			WP_013225085.1	MFS transporter	41.4	42.7	22.9
MGA_2035	LOCUS_19930	sequence101:571..1551(-)	internal_stop_codon	571..573(-)		WP_011254026.1	IS1182 family transposase	99.7	57.2	76.9
MGA_2036	LOCUS_19940	sequence102:262..1248(+)	frameshift		1218	WP_003549893.1	IS110 family transposase	96.0	76.7	48.3
MGA_2104	LOCUS_20590	sequence106:55624..56334(-)	frameshift		56402	WP_011254096.1	APC family permease	100.0	44.5	85.6
MGA_2105	LOCUS_20600	sequence106:56400..57215(-)	frameshift		56402	WP_011254096.1	APC family permease	100.0	51.1	92.3
MGA_2107	LOCUS_20620	sequence106:58788..58991(+)	partial			WP_003548967.1	hypothetical protein	95.5	61.0	92.2
MGA_2109	LOCUS_20640	sequence107:495..914(+)	frameshift		860	WP_148255728.1	IS5 family transposase	89.9	46.8	62.4
MGA_2111	LOCUS_20650	sequence109:1..957(+)	internal_stop_codon	955..957(+)		WP_011254026.1	IS1182 family transposase	100.0	55.5	72.3
MGA_2118	LOCUS_20700	sequence114:1..1029(+)	partial			WP_011460717.1	IS4 family transposase	99.7	74.0	29.5
MGA_2122	LOCUS_20720	sequence116:475..957(+)	frameshift		475,955	WP_003549893.1	IS110 family transposase	97.5	38.2	39.7