# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_4	LOCUS_00040	sequence01:3335..3655(-)	partial			WP_011100976.1	hypothetical protein	100.0	70.2	92.5
MGA_63	LOCUS_00630	sequence01:59104..59310(+)	partial			WP_011100957.1	LysM peptidoglycan-binding domain-containing protein	100.0	25.5	100.0
MGA_118	LOCUS_01180	sequence01:117123..117728(-)	partial			WP_002280228.1	helix-turn-helix transcriptional regulator	93.0	66.0	42.1
MGA_159	LOCUS_01590	sequence01:165420..166709(+)	internal_stop_codon	166707..166709(+)		WP_011100911.1	discoidin domain-containing protein	100.0	45.3	99.3
MGA_160	LOCUS_01600	sequence01:166941..168266(+)	internal_stop_codon	166707..166709(+)		WP_011100911.1	discoidin domain-containing protein	100.0	46.5	100.0
MGA_242	LOCUS_02420	sequence01:252297..252668(-)	frameshift		252721	WP_011100871.1	DUF3658 domain-containing protein	100.0	53.9	95.9
MGA_243	LOCUS_02430	sequence01:252698..252973(-)	frameshift		252721	WP_011100871.1	DUF3658 domain-containing protein	95.6	38.2	96.6
MGA_361	LOCUS_03610	sequence01:393547..393771(-)	frameshift,internal_stop_codon	393806..393808(-),393830..393832(-)	393763	WP_003584159.1	hypothetical protein	95.9	67.0	43.7
MGA_362	LOCUS_03620	sequence01:394157..394711(-)	frameshift		394160,394679,393964,394919	WP_065904166.1	Y-family DNA polymerase	94.0	44.8	70.8
MGA_363	LOCUS_03630	sequence01:394648..394827(-)	frameshift		394678,395044,394918	WP_065904166.1	Y-family DNA polymerase	81.4	11.0	75.0
MGA_365	LOCUS_03650	sequence01:395416..398373(-)	partial			WP_011102038.1	SH3 domain-containing protein	47.0	51.0	57.3
MGA_373	LOCUS_03720	sequence02:4455..4685(+)	frameshift,internal_stop_codon	4683..4685(+)	4688	WP_002263344.1	aldo/keto reductase	94.7	25.7	65.3
MGA_374	LOCUS_03730	sequence02:4777..5316(+)	frameshift		4682	WP_004080532.1	aldo/keto reductase	98.3	61.5	52.8
MGA_376	LOCUS_03750	sequence02:6215..6625(-)	internal_stop_codon	6716..6718(-)		WP_011101863.1	SH3 domain-containing protein	94.9	17.1	52.2
MGA_377	LOCUS_03760	sequence02:6716..7168(-)	internal_stop_codon	7244..7246(-),6716..6718(-)		WP_011101863.1	SH3 domain-containing protein	99.3	19.9	42.3
MGA_378	LOCUS_03770	sequence02:7244..8050(-)	internal_stop_codon	7244..7246(-)		WP_011101863.1	SH3 domain-containing protein	94.4	35.2	25.4
MGA_380	LOCUS_03790	sequence02:10723..11265(+)	internal_stop_codon	11263..11265(+)		WP_054398098.1	NADP-dependent oxidoreductase	100.0	56.4	94.4
MGA_381	LOCUS_03800	sequence02:11356..11682(+)	internal_stop_codon	11263..11265(+)		WP_054398098.1	NADP-dependent oxidoreductase	100.0	33.9	94.4
MGA_395	LOCUS_03940	sequence02:28057..28272(+)	partial			WP_080235523.1	hypothetical protein	71.8	68.9	72.5
MGA_397	LOCUS_03960	sequence02:29068..31734(-)	partial			WP_076642750.1	MucBP domain-containing protein	82.2	61.4	93.8
MGA_472	LOCUS_04710	sequence03:7778..8020(-)	frameshift		8015	WP_112297264.1	hypothetical protein	98.8	19.2	100.0
MGA_473	LOCUS_04720	sequence03:7983..8942(-)	frameshift		8015	WP_112297264.1	hypothetical protein	97.5	75.5	93.6
MGA_486	LOCUS_04850	sequence03:22479..22811(+)	frameshift		22808	WP_011101392.1	MFS transporter	100.0	27.9	100.0
MGA_487	LOCUS_04860	sequence03:22799..23668(+)	frameshift		22802	WP_011101392.1	MFS transporter	99.0	72.6	99.3
MGA_498	LOCUS_04970	sequence03:37895..38140(-)	partial			WP_003643130.1	hypothetical protein	74.1	74.1	100.0
MGA_516	LOCUS_05150	sequence03:61726..62139(+)	frameshift		62103	WP_003645251.1	type II CAAX endopeptidase family protein	92.0	55.3	99.2
MGA_517	LOCUS_05160	sequence03:62130..62411(+)	frameshift		62103	WP_003645251.1	type II CAAX endopeptidase family protein	100.0	40.8	100.0
MGA_548	LOCUS_05470	sequence03:95348..95758(-)	partial			WP_011101349.1	accessory Sec system glycosyltransferase Asp1	86.8	23.2	100.0
MGA_598	LOCUS_05960	sequence04:45774..46619(+)	partial			WP_011101719.1	serine hydrolase	100.0	74.7	98.6
MGA_619	LOCUS_06170	sequence04:65831..66148(+)	internal_stop_codon	66146..66148(+)		WP_011101713.1	glutamate--cysteine ligase	100.0	25.5	100.0
MGA_620	LOCUS_06180	sequence04:66281..67069(+)	internal_stop_codon	66146..66148(+)		WP_011101713.1	glutamate--cysteine ligase	100.0	63.6	98.9
MGA_664	LOCUS_06620	sequence05:17096..17533(-)	partial			WP_003563240.1	PTS sugar transporter subunit IIA	98.6	20.6	37.5
MGA_665	LOCUS_06630	sequence05:17665..18732(+)	frameshift		18717	WP_003642905.1	PTS sugar transporter subunit IIA	95.8	49.5	33.3
MGA_666	LOCUS_06640	sequence05:18933..19712(+)	frameshift		18717	WP_003642905.1	PTS sugar transporter subunit IIA	97.7	36.6	36.8
MGA_734	LOCUS_07320	sequence05:89697..90014(-)	partial			WP_015825158.1	cupin domain-containing protein	100.0	60.3	100.0
MGA_746	LOCUS_07430	sequence06:9811..14964(-)	partial			WP_011475661.1	tape measure protein	38.4	55.1	28.5
MGA_775	LOCUS_07720	sequence06:30438..31235(-)	partial			WP_010905691.1	phage replisome organiser protein	72.1	72.2	35.1
MGA_820	LOCUS_08170	sequence06:70377..70757(+)	partial			WP_003644123.1	polyprenyl synthetase family protein	86.5	33.5	100.0
MGA_821	LOCUS_08180	sequence06:70825..71184(+)	partial			WP_003644123.1	polyprenyl synthetase family protein	100.0	36.6	96.6
MGA_822	LOCUS_08190	sequence06:71374..72351(+)	partial			WP_011027855.1	L,D-transpeptidase family protein	57.5	81.1	31.7
MGA_839	LOCUS_08350	sequence07:829..987(+)	frameshift		832,805,751	WP_011100990.1	Imm63 family immunity protein	96.2	37.0	84.0
MGA_858	LOCUS_08540	sequence07:18514..19197(-)	frameshift		18591	WP_003644185.1	helix-turn-helix transcriptional regulator	88.5	81.0	97.5
MGA_875	LOCUS_08710	sequence07:33285..34136(-)	partial			WP_011101277.1	serine hydrolase domain-containing protein	98.6	72.6	48.6
MGA_923	LOCUS_09190	sequence08:19205..19648(+)	frameshift		19106	WP_003643849.1	cyclic di-AMP binding protein CbpA	100.0	69.3	100.0
MGA_939	LOCUS_09350	sequence08:38873..39034(-)	frameshift		39044	WP_080373066.1	hypothetical protein	96.2	43.6	82.4
MGA_1009	LOCUS_10050	sequence09:42553..43482(+)	partial			WP_003644570.1	oligosaccharide flippase family protein	100.0	64.0	96.4
MGA_1026	LOCUS_10220	sequence09:60282..61211(-)	internal_stop_codon	61404..61406(-)		WP_011674142.1	site-specific integrase	95.1	77.1	35.9
MGA_1027	LOCUS_10230	sequence09:61812..61997(-)	internal_stop_codon	61812..61814(-),62205..62207(-)		WP_100206281.1	IS982 family transposase	100.0	23.6	46.8
MGA_1055	LOCUS_10490	sequence10:23416..23961(+)	frameshift		23489	WP_011101000.1	CPBP family intramembrane metalloprotease	89.0	70.6	42.9
MGA_1145	LOCUS_11380	sequence12:1..1223(+)	partial			WP_011101486.1	KxYKxGKxW signal peptide domain-containing protein	100.0	18.3	93.8
MGA_1146	LOCUS_11390	sequence12:1419..1715(+)	partial			WP_003640388.1	alcohol dehydrogenase	100.0	62.8	99.0
MGA_1185	LOCUS_11780	sequence12:38413..38985(-)	partial			WP_000257255.1	site-specific integrase	97.4	46.1	28.8
MGA_1186	LOCUS_11790	sequence12:39034..39459(-)	frameshift,internal_stop_codon	39033..39035(-)	39494	WP_010774185.1	site-specific integrase	91.5	32.6	43.6
MGA_1233	LOCUS_12260	sequence12:85232..86464(-)	partial			WP_003640480.1	iron ABC transporter permease	100.0	74.1	98.3
MGA_1248	LOCUS_12410	sequence12:100971..101291(+)	frameshift		101261	WP_003576872.1	GNAT family N-acetyltransferase	90.6	55.5	49.0
MGA_1272	LOCUS_12650	sequence12:125226..125891(+)	partial			WP_011101552.1	ATP-binding cassette domain-containing protein	50.2	37.1	99.1
MGA_1362	LOCUS_13550	sequence12:227880..228239(+)	partial			WP_003646031.1	O-antigen ligase family protein	100.0	29.7	97.5
MGA_1378	LOCUS_13710	sequence12:246256..248136(-)	partial			WP_005898589.1	subtype B tannase	49.4	61.5	33.7
MGA_1386	LOCUS_13790	sequence12:256403..256954(-)	partial			WP_011181746.1	TetR/AcrR family transcriptional regulator	39.3	34.1	43.1
MGA_1424	LOCUS_14170	sequence12:293676..293945(-)	partial			WP_011101609.1	diacylglycerol kinase family protein	100.0	64.5	85.4
MGA_1469	LOCUS_14620	sequence12:339263..341176(-)	partial			WP_011101641.1	translation initiation factor IF-2	95.9	71.2	99.3
MGA_1500	LOCUS_14930	sequence12:368935..369318(+)	partial			WP_002387265.1	SHOCT domain-containing protein	98.4	58.4	41.6
MGA_1503	LOCUS_14960	sequence12:371559..371816(-)	frameshift,internal_stop_codon	371948..371950(-)	371836	WP_148335055.1	IS3 family transposase	95.3	24.7	45.7
MGA_1515	LOCUS_15060	sequence13:10520..11215(-)	partial			WP_103394993.1	DapH/DapD/GlmU-related protein	52.4	73.8	40.5
MGA_1516	LOCUS_15070	sequence13:11218..12165(-)	partial			WP_161799666.1	capsular polysaccharide synthesis protein	67.6	67.7	36.4
MGA_1530	LOCUS_15210	sequence13:22635..23318(+)	internal_stop_codon	23316..23318(+)		WP_014748796.1	ISL3 family transposase	97.8	53.5	40.1
MGA_1531	LOCUS_15220	sequence13:23328..23669(+)	internal_stop_codon	23316..23318(+)		WP_002289249.1	ISL3 family transposase	36.3	9.5	68.3
MGA_1532	LOCUS_15230	sequence13:23927..24433(-)	frameshift		24066,24423	WP_003643249.1	dTDP-glucose 4,6-dehydratase	71.4	35.1	81.7
MGA_1533	LOCUS_15240	sequence13:24325..24933(-)	frameshift		24066,24423	WP_003643249.1	dTDP-glucose 4,6-dehydratase	84.2	50.9	69.0
MGA_1564	LOCUS_15550	sequence14:9034..9417(+)	partial			WP_003645451.1	preprotein translocase subunit YajC	74.8	74.8	92.6
MGA_1641	LOCUS_16320	sequence15:29839..30231(+)	internal_stop_codon	30229..30231(+)		WP_011102015.1	SDR family oxidoreductase	100.0	51.8	99.2
MGA_1642	LOCUS_16330	sequence15:30265..30594(+)	internal_stop_codon	30229..30231(+)		WP_011102015.1	SDR family oxidoreductase	100.0	43.4	100.0
MGA_1656	LOCUS_16470	sequence15:44427..44873(+)	frameshift		44804	WP_003644879.1	iron-containing alcohol dehydrogenase	85.1	32.3	100.0
MGA_1657	LOCUS_16480	sequence15:44875..45600(+)	frameshift		44804	WP_003644879.1	iron-containing alcohol dehydrogenase	100.0	61.8	99.2
MGA_1752	LOCUS_17390	sequence21:2648..3487(-)	frameshift		2728	WP_003644751.1	AEC family transporter	90.0	81.5	98.8
MGA_1765	LOCUS_17520	sequence22:839..1978(-)	partial			WP_003642123.1	LysM domain-containing protein	27.2	29.1	78.6
MGA_1781	LOCUS_17670	sequence23:7858..13689(-)	partial			WP_011101123.1	tape measure protein	39.3	51.3	27.1
MGA_1823	LOCUS_18090	sequence23:37435..38370(+)	partial			WP_011674688.1	hypothetical protein	51.4	56.4	30.7
MGA_1826	LOCUS_18120	sequence23:39686..40405(+)	partial			WP_011101077.1	DNA/RNA non-specific endonuclease	29.7	20.7	62.5
MGA_1837	LOCUS_18230	sequence23:48212..50932(-)	partial			WP_011101804.1	MucBP domain-containing protein	79.9	72.7	41.9
MGA_1957	LOCUS_19430	sequence23:174869..175987(-)	partial			WP_000666879.1	hypothetical protein	59.9	47.9	25.9
MGA_2074	LOCUS_20600	sequence23:301696..302379(-)	partial			WP_011101919.1	bacterial Ig-like domain-containing protein	99.6	21.8	93.4
MGA_2089	LOCUS_20740	sequence24:6196..6417(-)	internal_stop_codon	6196..6198(-)		WP_011101314.1	helix-turn-helix domain-containing protein	100.0	57.1	48.0
MGA_2091	LOCUS_20760	sequence24:6990..7475(-)	partial			WP_011101323.1	MucBP domain-containing protein	82.6	13.4	29.8
MGA_2094	LOCUS_20790	sequence24:7835..8410(-)	internal_stop_codon	8513..8515(-)		WP_011109529.1	BspA family leucine-rich repeat surface protein	79.6	15.9	37.5
MGA_2095	LOCUS_20800	sequence24:8513..8962(-)	internal_stop_codon	8513..8515(-)		WP_011101323.1	MucBP domain-containing protein	100.0	14.4	30.5
MGA_2097	LOCUS_20820	sequence24:10215..10412(-)	frameshift,internal_stop_codon	10434..10436(-),10611..10613(-),10641..10643(-)	10241,10156,10039	WP_011100920.1	IS1182 family transposase	87.7	16.5	48.4
MGA_2098	LOCUS_20830	sequence24:10434..10571(-)	frameshift,internal_stop_codon	10434..10436(-),10611..10613(-),10641..10643(-)	10241,10156	WP_011102189.1	IS1182 family transposase	100.0	7.9	80.0
MGA_2099	LOCUS_20840	sequence24:10641..10847(-)	frameshift,internal_stop_codon	10433..10435(-),10640..10642(-),10865..10867(-),10610..10612(-)	10990	WP_013355994.1	IS1182 family transposase	97.1	12.0	87.9
MGA_2100	LOCUS_20850	sequence24:10973..11182(-)	frameshift,internal_stop_codon	10865..10867(-)	11354,10990	WP_011102189.1	IS1182 family transposase	97.1	12.1	79.1
MGA_2101	LOCUS_20860	sequence24:11322..11531(-)	frameshift		11354	WP_011102189.1	IS1182 family transposase	84.1	10.4	77.6
MGA_2108	LOCUS_20920	sequence25:5059..5832(+)	internal_stop_codon	5830..5832(+)		WP_003561810.1	IS30-like element ISLpl1 family transposase	100.0	83.2	98.4
MGA_2119	LOCUS_21020	sequence28:366..503(-)	internal_stop_codon	510..512(-),366..368(-)		WP_009931433.1	hypothetical protein	97.8	38.3	56.8
MGA_2123	LOCUS_21060	sequence28:1879..2070(-)	internal_stop_codon	2119..2121(-)		WP_011100984.1	hypothetical protein	96.8	70.1	68.9
MGA_2125	LOCUS_21080	sequence28:2992..3162(-)	frameshift		2969,3003,2981	WP_003646452.1	hypothetical protein	96.4	68.4	92.6
MGA_2133	LOCUS_21130	sequence32:1..557(+)	frameshift,internal_stop_codon	754..756(+)	536	WP_011101833.1	SpaA isopeptide-forming pilin-related protein	92.9	24.7	43.5
MGA_2134	LOCUS_21140	sequence32:508..756(+)	frameshift,internal_stop_codon	754..756(+)	536	WP_011101833.1	SpaA isopeptide-forming pilin-related protein	87.8	10.2	59.7
MGA_2136	LOCUS_21160	sequence33:113..286(-)	internal_stop_codon	113..115(-)		WP_005808874.1	group II intron reverse transcriptase/maturase	100.0	12.2	68.4
MGA_2167	LOCUS_21470	sequence34:34611..35120(+)	partial			WP_003641117.1	hypothetical protein	54.4	54.4	40.2
MGA_2170	LOCUS_21500	sequence34:37270..38460(+)	partial			WP_011101187.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	71.0	51.7	96.1
MGA_2171	LOCUS_21510	sequence34:38463..39455(+)	partial			WP_011101187.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	80.0	48.6	98.1
MGA_2187	LOCUS_21670	sequence34:52435..52953(-)	partial			WP_072535403.1	sulfite exporter TauE/SafE family protein	100.0	68.0	89.5
MGA_2202	LOCUS_21820	sequence34:69261..71192(+)	partial			WP_011476570.1	AAA family ATPase	99.2	69.4	35.1
MGA_2204	LOCUS_21840	sequence34:71976..72179(+)	frameshift,internal_stop_codon	71969..71971(+)	72173,71974,72206	WP_035148028.1	helix-turn-helix domain-containing protein	94.0	28.1	47.6
MGA_2205	LOCUS_21850	sequence34:72211..72510(+)	frameshift,internal_stop_codon	72510..72512(+),71969..71971(+)	72173,71974,72206	WP_035148028.1	helix-turn-helix domain-containing protein	100.0	44.2	70.7
MGA_2206	LOCUS_21860	sequence34:72772..73017(+)	frameshift		73159,73225,73180,72733,72991	WP_125982402.1	DDE-type integrase/transposase/recombinase	90.1	27.0	91.8
MGA_2207	LOCUS_21870	sequence34:73160..73387(+)	frameshift		73161,73179,73236,72990	WP_156093518.1	IS3 family transposase	100.0	30.5	68.4
MGA_2288	LOCUS_22680	sequence34:168372..168779(-)	partial			WP_011101245.1	prepilin peptidase	100.0	59.7	85.2
MGA_2340	LOCUS_23200	sequence34:207647..208567(+)	frameshift		208543	WP_011101252.1	3-dehydroquinate synthase	98.4	83.8	97.0
MGA_2341	LOCUS_23210	sequence34:208543..208725(+)	frameshift		208543	WP_011101252.1	3-dehydroquinate synthase	100.0	16.7	98.3
MGA_2360	LOCUS_23400	sequence34:227311..227511(-)	frameshift		227494	WP_011674809.1	IS30 family transposase	89.4	17.8	66.1
MGA_2361	LOCUS_23410	sequence34:227483..228310(-)	frameshift		227494	WP_011674315.1	IS30 family transposase	99.3	82.2	64.8
MGA_2413	LOCUS_23830	sequence44:39919..40122(-)	partial			WP_003645582.1	hypothetical protein	65.7	65.7	97.7
MGA_2471	LOCUS_24410	sequence44:109375..109548(+)	frameshift		109372	WP_003643568.1	PTS transporter subunit EIIC	63.2	8.1	100.0
MGA_2480	LOCUS_24500	sequence44:120433..120840(-)	frameshift		120934	WP_011102198.1	PTS fructose-like transporter subunit IIBC	100.0	27.8	94.8
MGA_2481	LOCUS_24510	sequence44:120920..121891(-)	frameshift		120928	WP_011102198.1	PTS fructose-like transporter subunit IIBC	99.4	66.2	99.1
MGA_2579	LOCUS_25490	sequence45:37749..39698(+)	internal_stop_codon	39634..39636(+)		WP_011101414.1	DNA translocase FtsK	100.0	65.1	94.8
MGA_2711	LOCUS_26810	sequence45:169320..174308(+)	frameshift,internal_stop_codon	174306..174308(+),174324..174326(+),174294..174296(+)	174296,174293,174350	WP_011101486.1	KxYKxGKxW signal peptide domain-containing protein	99.8	74.7	80.7
MGA_2714	LOCUS_26830	sequence46:663..977(+)	partial			WP_118828336.1	metalloregulator ArsR/SmtB family transcription factor	78.8	65.6	37.8
MGA_2757	LOCUS_27260	sequence46:48213..48410(+)	partial			WP_003642209.1	hypothetical protein	50.8	51.6	100.0
MGA_2772	LOCUS_27410	sequence46:65373..65762(+)	frameshift		65711	WP_003644782.1	MFS transporter	92.2	28.1	97.5
MGA_2773	LOCUS_27420	sequence46:65786..66622(+)	frameshift		65711	WP_003644782.1	MFS transporter	100.0	66.8	94.6
MGA_2796	LOCUS_27650	sequence46:97931..98086(+)	internal_stop_codon	98084..98086(+)		WP_214417977.1	hypothetical protein	100.0	27.4	82.4
MGA_2805	LOCUS_27740	sequence46:105774..106118(+)	partial			WP_003566985.1	MerR family transcriptional regulator	77.2	65.7	47.7
MGA_2806	LOCUS_27750	sequence46:106200..106670(+)	partial			WP_014565877.1	flavodoxin	87.2	36.1	39.7
MGA_2841	LOCUS_28100	sequence47:526..1332(-)	partial			WP_010903655.1	MFS transporter	68.7	41.2	32.4
MGA_2929	LOCUS_28980	sequence47:106748..107191(-)	partial			WP_003643951.1	ComF family protein	100.0	65.6	94.6
MGA_2998	LOCUS_29670	sequence48:61390..61851(-)	partial			WP_003576585.1	fructose-specific PTS transporter subunit EIIC	91.5	21.1	36.4