{
    "type": "genome",
    "identifier": "GCF_001434775.1",
    "organism": "Companilactobacillus farciminis KCTC 3681 = DSM 20184",
    "title": "Companilactobacillus farciminis KCTC 3681 = DSM 20184",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Shanghai Majorbio",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_001434775.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02369427",
        "wgs_master": "AZDR00000000.1",
        "refseq_category": "na",
        "taxid": "936140",
        "species_taxid": "1612",
        "organism_name": "Companilactobacillus farciminis KCTC 3681 = DSM 20184",
        "infraspecific_name": "strain=DSM 20184",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2015/11/06",
        "asm_name": "ASM143477v1",
        "asm_submitter": "Shanghai Majorbio",
        "gbrs_paired_asm": "GCA_001434775.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/434/775/GCF_001434775.1_ASM143477v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2480845",
        "genome_size_ungapped": "2480845",
        "gc_percent": "36.500000",
        "replicon_count": "0",
        "scaffold_count": "76",
        "contig_count": "76",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_001434775.1-RS_2024_03_29",
        "annotation_date": "2024-03-29",
        "total_gene_count": "2477",
        "protein_coding_gene_count": "2412",
        "non_coding_gene_count": "46",
        "pubmed_id": "26415554"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2015-11-06",
    "dateModified": "2015-11-06",
    "datePublished": "2015-11-06",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Companilactobacillus farciminis KCTC 3681 = DSM 20184"
        ],
        "sample_taxid": [
            "936140"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "-"
        ],
        "sample_host_location_id": [],
        "data_size": "0.702 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2480845",
        "Number of Sequences": "76",
        "Longest Sequences (bp)": "244146",
        "N50 (bp)": "112984",
        "Gap Ratio (%)": "0.000524",
        "GCcontent (%)": "36.4",
        "Number of CDSs": "2423",
        "Average Protein Length": "300.4",
        "Coding Ratio (%)": "88.0",
        "Number of rRNAs": "1",
        "Number of tRNAs": "40",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Companilactobacillus farciminis",
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                "species_taxid": 1612,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 100.0,
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                "total_fragments": 796,
                "ani_threshold": 95,
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            },
            {
                "organism_name": "Companilactobacillus farciminis",
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                "relation_to_type": "suspected-type",
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                "ani": 99.9965,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Companilactobacillus farciminis",
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                "accession": "GCA_004354695.1",
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                "status": "conclusive"
            },
            {
                "organism_name": "Companilactobacillus farciminis",
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                "species_taxid": 1612,
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            },
            {
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                "strain": "strain=NBRC 109509",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Companilactobacillus pabuli",
                "strain": "strain=NFFJ11",
                "accession": "GCA_014058425.1",
                "taxid": 2714036,
                "species_taxid": 2714036,
                "relation_to_type": "type",
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                "matched_fragments": 678,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Companilactobacillus paralimentarius",
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                "accession": "GCA_009764345.1",
                "taxid": 83526,
                "species_taxid": 83526,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Companilactobacillus kimchii",
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                "accession": "GCA_009764365.1",
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                "species_taxid": 2801452,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Companilactobacillus allii",
                "strain": "strain=WiKim39",
                "accession": "GCA_023923085.1",
                "taxid": 1847728,
                "species_taxid": 1847728,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.0888,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Companilactobacillus mishanensis",
                "strain": "strain=256-3",
                "accession": "GCA_003946505.1",
                "taxid": 2486008,
                "species_taxid": 2486008,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.7532,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
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            "contamination": 0.0,
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                "accession": "GCF_002706745.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Companilactobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.95",
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            },
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                "accession": "GCF_009600985.1",
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        ]
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    "_bac2feature": {
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        "bacillus_cell_shape": null,
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    "_genome_taxon": [
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        "20184"
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}