{
    "type": "genome",
    "identifier": "GCF_001435425.1",
    "organism": "Loigolactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535",
    "title": "Loigolactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Shanghai Majorbio",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_001435425.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02369375",
        "wgs_master": "AZDC00000000.1",
        "refseq_category": "na",
        "taxid": "1423822",
        "species_taxid": "1610",
        "organism_name": "Loigolactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535",
        "infraspecific_name": "strain=DSM 20004",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2015/11/06",
        "asm_name": "ASM143542v1",
        "asm_submitter": "Shanghai Majorbio",
        "gbrs_paired_asm": "GCA_001435425.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/435/425/GCF_001435425.1_ASM143542v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2783277",
        "genome_size_ungapped": "2782850",
        "gc_percent": "43.000000",
        "replicon_count": "0",
        "scaffold_count": "410",
        "contig_count": "410",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_001435425.1-RS_2024_03_30",
        "annotation_date": "2024-03-30",
        "total_gene_count": "2831",
        "protein_coding_gene_count": "2685",
        "non_coding_gene_count": "48",
        "pubmed_id": "26415554"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2015-11-06",
    "dateModified": "2015-11-06",
    "datePublished": "2015-11-06",
    "_annotation": {
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        "sample_organism": [
            "Loigolactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535"
        ],
        "sample_taxid": [
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        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
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        ],
        "sample_host_location_id": [],
        "data_size": "0.800 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2783277",
        "Number of Sequences": "410",
        "Longest Sequences (bp)": "65225",
        "N50 (bp)": "17315",
        "Gap Ratio (%)": "0.016419",
        "GCcontent (%)": "42.9",
        "Number of CDSs": "2651",
        "Average Protein Length": "292.7",
        "Coding Ratio (%)": "83.6",
        "Number of rRNAs": "1",
        "Number of tRNAs": "37",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "relation_to_type": "type",
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            },
            {
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                "organism_name": "Loigolactobacillus coryniformis subsp. coryniformis",
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                "status": "conclusive"
            },
            {
                "organism_name": "Loigolactobacillus coryniformis subsp. coryniformis",
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Loigolactobacillus zhaoyuanensis",
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                "mean_intra_species_ani": "N/A",
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        ]
    },
    "_bac2feature": {
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        "mesophilic_range_tmp": null,
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        "bacillus_cell_shape": null,
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        "vibrio_cell_shape": null,
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    "_genome_taxon": [
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        "torquens",
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    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}