# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_10	LOCUS_00100	sequence01:7263..7979(+)	internal_stop_codon	7113..7115(+),7218..7220(+)		WP_003548873.1	magnesium-translocating P-type ATPase	84.5	22.4	43.8
MGA_33	LOCUS_00330	sequence01:32967..34259(+)	frameshift		34133	WP_011254096.1	APC family permease	90.5	73.4	84.1
MGA_34	LOCUS_00340	sequence01:34192..34509(+)	frameshift		34133	WP_011254096.1	APC family permease	95.2	18.9	69.0
MGA_99	LOCUS_00990	sequence01:90539..90748(+)	frameshift		90536,90716,90840	WP_003549071.1	sulfite exporter TauE/SafE family protein	81.2	22.2	48.2
MGA_117	LOCUS_01170	sequence01:105807..106295(+)	frameshift		106274	WP_003549094.1	transcription termination/antitermination protein NusG	95.7	83.2	89.0
MGA_123	LOCUS_01230	sequence01:110568..111137(+)	frameshift		111107	WP_015613297.1	phosphate ABC transporter ATP-binding protein PstB	93.7	67.0	83.6
MGA_124	LOCUS_01240	sequence01:111077..111358(+)	frameshift		111107	WP_015613297.1	phosphate ABC transporter ATP-binding protein PstB	91.4	32.2	92.9
MGA_129	LOCUS_01290	sequence01:114073..114525(+)	partial			WP_003549107.1	ion channel	98.0	55.3	39.7
MGA_161	LOCUS_01610	sequence01:144530..144979(+)	partial			WP_015613305.1	preprotein translocase subunit YajC	65.1	73.7	68.7
MGA_172	LOCUS_01720	sequence01:156896..157831(+)	frameshift,internal_stop_codon	158045..158047(+)	157798	WP_015613420.1	GHKL domain-containing protein	56.3	53.4	45.7
MGA_173	LOCUS_01730	sequence01:157837..158046(+)	frameshift,internal_stop_codon	158045..158047(+)	157798	WP_015613420.1	GHKL domain-containing protein	100.0	22.0	59.7
MGA_174	LOCUS_01740	sequence01:158062..158247(+)	frameshift,internal_stop_codon	158045..158047(+)	157804	WP_015613420.1	GHKL domain-containing protein	91.8	17.1	66.1
MGA_203	LOCUS_02020	sequence02:21925..22113(+)	internal_stop_codon	21883..21885(+),22111..22113(+),21742..21744(+),22132..22134(+),21889..21891(+)		WP_003546985.1	HAD-IC family P-type ATPase	100.0	7.8	61.9
MGA_204	LOCUS_02030	sequence02:22147..23322(+)	internal_stop_codon	22111..22113(+),22132..22134(+)		WP_003546985.1	HAD-IC family P-type ATPase	99.7	48.4	73.6
MGA_211	LOCUS_02100	sequence02:29584..30429(+)	internal_stop_codon	30427..30429(+)		WP_011254524.1	Rib/alpha-like domain-containing protein	98.9	16.2	31.2
MGA_228	LOCUS_02270	sequence02:44207..44389(+)	internal_stop_codon	44168..44170(+),44387..44389(+)		WP_011475480.1	Rpn family recombination-promoting nuclease/putative transposase	100.0	23.6	44.3
MGA_229	LOCUS_02280	sequence02:44393..44821(+)	internal_stop_codon	44168..44170(+),44387..44389(+)		WP_011475480.1	Rpn family recombination-promoting nuclease/putative transposase	84.5	48.0	29.5
MGA_233	LOCUS_02320	sequence03:203..403(+)	partial			WP_002385631.1	potassium channel family protein	83.3	22.7	45.5
MGA_240	LOCUS_02390	sequence03:5590..5934(-)	partial			WP_106663664.1	SDR family oxidoreductase	86.8	39.8	43.4
MGA_241	LOCUS_02400	sequence03:6097..6387(-)	partial			WP_011254394.1	GNAT family N-acetyltransferase	90.6	58.8	54.0
MGA_245	LOCUS_02440	sequence03:8286..8444(-)	frameshift		8505	WP_003549562.1	amino acid permease	92.3	10.7	64.6
MGA_246	LOCUS_02450	sequence03:8425..9306(-)	frameshift		9376,8503,9415	WP_003549562.1	amino acid permease	91.1	59.5	80.1
MGA_252	LOCUS_02510	sequence03:12800..13009(-)	partial			WP_003549308.1	AAC(3) family N-acetyltransferase	72.5	18.2	70.0
MGA_255	LOCUS_02540	sequence03:14156..15148(+)	frameshift		15130	WP_003550020.1	peptide ABC transporter substrate-binding protein	99.1	59.7	77.1
MGA_256	LOCUS_02550	sequence03:15186..15800(+)	frameshift		15136	WP_003550020.1	peptide ABC transporter substrate-binding protein	100.0	37.4	77.5
MGA_262	LOCUS_02610	sequence03:22561..22833(+)	frameshift		22872,22577,22743	WP_034532906.1	kinase	61.1	33.7	67.3
MGA_264	LOCUS_02630	sequence03:23618..23851(+)	frameshift		23794	WP_003547349.1	DUF6176 family protein	76.6	49.6	67.8
MGA_267	LOCUS_02660	sequence03:25050..25316(-)	frameshift,internal_stop_codon	25059..25061(-)	25109	WP_052846195.1	sulfite exporter TauE/SafE family protein	65.9	22.4	48.3
MGA_270	LOCUS_02690	sequence03:27394..27525(+)	partial			WP_003547891.1	oligopeptide ABC transporter substrate-binding protein	90.7	6.6	64.1
MGA_271	LOCUS_02700	sequence03:27741..27995(+)	partial			WP_003549915.1	hypothetical protein	88.1	23.6	52.7
MGA_273	LOCUS_02720	sequence03:29713..31374(+)	internal_stop_codon	31372..31374(+)		WP_003641095.1	RNA degradosome polyphosphate kinase	97.3	74.9	62.2
MGA_274	LOCUS_02730	sequence03:31387..31902(+)	internal_stop_codon	31372..31374(+)		WP_003641095.1	RNA degradosome polyphosphate kinase	77.2	18.5	66.2
MGA_277	LOCUS_02760	sequence03:34962..35213(+)	frameshift		35171	WP_011254509.1	FMN-dependent dehydrogenase	95.2	23.2	62.0
MGA_278	LOCUS_02770	sequence03:35292..35477(+)	frameshift		35253	WP_011101819.1	homoserine O-succinyltransferase	95.1	19.9	48.3
MGA_283	LOCUS_02820	sequence03:41345..41572(+)	partial			WP_003547296.1	SLAP domain-containing protein	94.7	17.9	60.6
MGA_284	LOCUS_02830	sequence03:41582..41782(+)	partial			WP_002679543.1	carbon-nitrogen hydrolase family protein	93.9	21.0	48.4
MGA_285	LOCUS_02840	sequence03:41871..42308(+)	partial			WP_010957047.1	carbon-nitrogen hydrolase family protein	97.9	47.5	65.5
MGA_290	LOCUS_02890	sequence03:46710..47333(+)	partial			WP_003549732.1	CPBP family intramembrane metalloprotease	94.7	49.2	35.0
MGA_299	LOCUS_02970	sequence04:8768..9298(-)	partial			WP_003549794.1	DeoR/GlpR family DNA-binding transcription regulator	77.3	54.2	77.9
MGA_324	LOCUS_03220	sequence04:34025..34426(-)	frameshift,internal_stop_codon	34542..34544(-),34036..34038(-)	34409,34002	WP_011254026.1	IS1182 family transposase	48.9	11.4	78.5
MGA_325	LOCUS_03230	sequence04:34347..34538(-)	frameshift,internal_stop_codon	34542..34544(-)	34409	WP_011254026.1	IS1182 family transposase	82.5	9.2	50.0
MGA_326	LOCUS_03240	sequence04:34542..34718(-)	frameshift,internal_stop_codon	34542..34544(-)	34409	WP_011254026.1	IS1182 family transposase	98.3	10.0	63.2
MGA_334	LOCUS_03320	sequence05:1569..1763(-)	partial			WP_003564982.1	membrane protein insertion efficiency factor YidD	75.0	47.5	72.9
MGA_343	LOCUS_03410	sequence05:8759..8983(-)	partial			WP_029779745.1	F0F1 ATP synthase subunit C	74.3	74.3	76.4
MGA_354	LOCUS_03520	sequence05:19966..20253(-)	partial			WP_011254238.1	VanZ family protein	92.6	44.0	69.3
MGA_372	LOCUS_03700	sequence06:321..1373(-)	partial			WP_011476405.1	C39 family peptidase	67.7	26.8	44.4
MGA_378	LOCUS_03760	sequence06:5444..5710(-)	partial			WP_011254318.1	YSIRK-type signal peptide-containing protein	67.0	2.6	42.4
MGA_380	LOCUS_03780	sequence06:6735..7178(-)	partial			WP_011254202.1	Cof-type HAD-IIB family hydrolase	93.9	51.3	60.1
MGA_382	LOCUS_03800	sequence06:9484..10191(-)	partial			WP_004255227.1	biotin--[acetyl-CoA-carboxylase] ligase	98.3	74.6	42.3
MGA_404	LOCUS_04020	sequence06:24769..25101(-)	partial			WP_003548117.1	MFS transporter	90.0	25.8	55.4
MGA_405	LOCUS_04030	sequence06:25113..25409(-)	partial			WP_003548117.1	MFS transporter	61.2	15.3	66.7
MGA_408	LOCUS_04060	sequence06:28693..29010(-)	internal_stop_codon	29131..29133(-)		WP_014565877.1	flavodoxin	94.3	27.3	72.8
MGA_409	LOCUS_04070	sequence06:29131..29265(-)	partial			WP_003547446.1	hypothetical protein	100.0	74.6	77.3
MGA_411	LOCUS_04090	sequence06:30313..30780(-)	frameshift		30764	WP_002321171.1	2-hydroxyacid dehydrogenase	94.2	45.9	41.8
MGA_413	LOCUS_04110	sequence06:32615..32929(-)	partial			WP_011254380.1	sugar O-acetyltransferase	100.0	51.0	74.0
MGA_418	LOCUS_04160	sequence07:32..853(-)	frameshift		972	WP_003550081.1	zinc ribbon domain-containing protein	99.6	78.7	53.5
MGA_419	LOCUS_04170	sequence07:850..1080(-)	frameshift		972	WP_003550081.1	zinc ribbon domain-containing protein	44.7	9.8	76.5
MGA_422	LOCUS_04200	sequence07:5449..5742(-)	frameshift		5731	WP_011254527.1	serine hydrolase	94.8	29.6	54.3
MGA_423	LOCUS_04210	sequence07:5630..6394(-)	frameshift		5731	WP_011254527.1	serine hydrolase	87.0	70.4	48.4
MGA_434	LOCUS_04320	sequence07:17310..17549(-)	partial			WP_003550051.1	DUF421 domain-containing protein	84.8	31.6	65.7
MGA_435	LOCUS_04330	sequence07:17533..17721(-)	partial			WP_003550049.1	DUF3290 domain-containing protein	98.4	46.3	55.1
MGA_437	LOCUS_04350	sequence07:19127..19609(-)	partial			WP_003550047.1	LPXTG cell wall anchor domain-containing protein	93.8	16.4	37.8
MGA_440	LOCUS_04380	sequence07:22181..22510(-)	internal_stop_codon	22600..22602(-)		WP_011254534.1	ABC transporter ATP-binding protein	97.2	19.9	83.0
MGA_441	LOCUS_04390	sequence07:22689..22886(-)	internal_stop_codon	22600..22602(-)		WP_011254534.1	ABC transporter ATP-binding protein	87.7	10.7	87.7
MGA_444	LOCUS_04420	sequence07:25090..25272(+)	partial			WP_003550031.1	response regulator transcription factor	100.0	25.8	90.0
MGA_445	LOCUS_04430	sequence07:25377..25631(-)	partial			WP_003550021.1	GNAT family N-acetyltransferase	51.2	25.1	67.4
MGA_451	LOCUS_04490	sequence07:28581..28817(-)	partial			WP_003550005.1	amino acid ABC transporter substrate-binding protein	100.0	28.7	73.1
MGA_455	LOCUS_04530	sequence07:33385..33963(-)	partial			WP_006586260.1	ABC transporter permease	78.6	24.7	49.0
MGA_457	LOCUS_04550	sequence07:34154..34762(+)	partial			WP_003549985.1	hypothetical protein	73.8	64.9	55.7
MGA_460	LOCUS_04580	sequence08:1131..1937(+)	partial			WP_009966620.1	coupling conjugation protein ConQ	72.4	39.4	33.3
MGA_469	LOCUS_04670	sequence08:8505..10067(-)	frameshift		10155	WP_003549289.1	ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent	100.0	69.9	85.6
MGA_470	LOCUS_04680	sequence08:10150..10719(-)	frameshift		10158	WP_003549289.1	ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent	99.5	25.4	89.9
MGA_488	LOCUS_04860	sequence08:26746..27030(+)	internal_stop_codon	27028..27030(+)		WP_003549250.1	amino acid permease	97.9	19.2	90.2
MGA_489	LOCUS_04870	sequence08:27037..28179(+)	internal_stop_codon	27028..27030(+)		WP_003549250.1	amino acid permease	100.0	79.2	75.5
MGA_492	LOCUS_04900	sequence08:32333..32707(-)	partial			WP_011674878.1	DUF2075 domain-containing protein	95.2	28.9	50.8
MGA_495	LOCUS_04930	sequence09:3445..3627(+)	frameshift		3418,3348	WP_011254406.1	GtrA family protein	95.0	40.1	68.4
MGA_498	LOCUS_04960	sequence09:4817..5047(+)	frameshift,internal_stop_codon	4789..4791(+)	4809	WP_012775361.1	membrane protein	96.1	13.2	36.8
MGA_504	LOCUS_05020	sequence09:11122..11472(+)	frameshift		11105,11012	WP_011254542.1	GNAT family N-acetyltransferase	100.0	62.0	65.5
MGA_520	LOCUS_05180	sequence09:26017..27924(+)	frameshift		25953,26031	WP_011476476.1	helix-turn-helix domain-containing protein	92.1	84.9	48.7
MGA_521	LOCUS_05190	sequence09:27825..28361(+)	partial			WP_011476472.1	mannitol-1-phosphate 5-dehydrogenase	96.6	44.5	73.3
MGA_526	LOCUS_05240	sequence10:1004..2248(-)	internal_stop_codon	2249..2251(-)		WP_003549932.1	glucose PTS transporter subunit IIA	98.1	60.3	77.6
MGA_527	LOCUS_05250	sequence10:2249..2482(-)	internal_stop_codon	2249..2251(-)		WP_003549932.1	glucose PTS transporter subunit IIA	98.7	11.5	65.8
MGA_534	LOCUS_05320	sequence10:11163..11495(-)	internal_stop_codon	11535..11537(-)		WP_003549441.1	CopY/TcrY family copper transport repressor	100.0	75.3	70.9
MGA_547	LOCUS_05450	sequence10:24698..25498(-)	partial			WP_011254625.1	YdcF family protein	100.0	72.5	60.9
MGA_578	LOCUS_05760	sequence12:8676..9302(+)	frameshift		9299	WP_003546265.1	calcium-translocating P-type ATPase, PMCA-type	99.5	23.4	80.3
MGA_579	LOCUS_05770	sequence12:9317..11338(+)	frameshift		9299	WP_003546265.1	calcium-translocating P-type ATPase, PMCA-type	99.6	75.3	82.2
MGA_594	LOCUS_05920	sequence12:28722..28958(+)	frameshift		28722	WP_003547510.1	adenylate kinase	98.7	47.2	49.4
MGA_596	LOCUS_05940	sequence12:30802..31251(+)	frameshift		30760	WP_009550763.1	hypothetical protein	100.0	80.5	96.6
MGA_611	LOCUS_06090	sequence12:43338..44324(-)	internal_stop_codon	43338..43340(-)		WP_010774201.1	site-specific DNA-methyltransferase	74.1	66.1	41.9
MGA_617	LOCUS_06150	sequence12:49924..50271(+)	internal_stop_codon	49837..49839(+)		WP_012775247.1	DUF3955 domain-containing protein	99.1	72.8	48.7
MGA_621	LOCUS_06190	sequence12:53947..54132(+)	partial			WP_011254194.1	ABC transporter ATP-binding protein	100.0	10.4	86.9
MGA_622	LOCUS_06200	sequence12:54310..54696(+)	frameshift		54651	WP_003546364.1	ECF transporter S component	96.1	64.1	79.7
MGA_636	LOCUS_06340	sequence12:66494..66661(-)	frameshift,internal_stop_codon	66493..66495(-),66860..66862(-)	66940,66757	WP_003546400.1	DeoR/GlpR family DNA-binding transcription regulator	100.0	21.7	43.6
MGA_645	LOCUS_06430	sequence12:76523..76834(+)	frameshift		76831	WP_003546429.1	nitroreductase	100.0	47.2	67.0
MGA_646	LOCUS_06440	sequence12:76809..77180(+)	frameshift		76831	WP_003546429.1	nitroreductase	95.1	53.7	73.5
MGA_649	LOCUS_06470	sequence12:79332..79781(-)	frameshift		79795	WP_011254206.1	amino acid permease	91.3	31.3	80.1
MGA_650	LOCUS_06480	sequence12:79775..80656(-)	frameshift		79795	WP_011254206.1	amino acid permease	98.0	66.1	82.9
MGA_663	LOCUS_06610	sequence12:93013..93690(-)	internal_stop_codon	93895..93897(-)		WP_011476411.1	glutamate/gamma-aminobutyrate family transporter YjeM	67.6	30.6	58.6
MGA_715	LOCUS_07130	sequence13:1550..2131(+)	frameshift,internal_stop_codon	1502..1504(+)	1485	WP_015943875.1	DUF554 domain-containing protein	96.4	82.2	49.5
MGA_716	LOCUS_07140	sequence13:2294..2464(+)	partial			WP_013853658.1	FAD-dependent oxidoreductase	98.2	13.9	60.7
MGA_730	LOCUS_07280	sequence13:13330..13674(+)	partial			WP_003549854.1	C40 family peptidase	63.2	29.0	51.3
MGA_734	LOCUS_07320	sequence13:17731..18111(+)	frameshift		18075	WP_003549864.1	Wzz/FepE/Etk N-terminal domain-containing protein	88.9	38.8	70.8
MGA_735	LOCUS_07330	sequence13:18177..18593(+)	frameshift		18075	WP_003549864.1	Wzz/FepE/Etk N-terminal domain-containing protein	100.0	49.1	65.0
MGA_739	LOCUS_07370	sequence13:20879..21160(+)	partial			WP_003549870.1	DUF4422 domain-containing protein	89.2	32.3	83.1
MGA_744	LOCUS_07420	sequence14:4065..4619(-)	partial			WP_011254066.1	SLAP domain-containing protein	89.1	34.8	41.5
MGA_749	LOCUS_07470	sequence14:7835..8350(-)	partial			WP_011254029.1	MBL fold metallo-hydrolase	70.2	46.8	72.6
MGA_758	LOCUS_07560	sequence14:17169..17915(+)	internal_stop_codon	17049..17051(+)		WP_003548560.1	LysR family transcriptional regulator	65.7	76.1	35.2
MGA_759	LOCUS_07570	sequence14:17928..18143(-)	frameshift		18139,18229,18367	WP_011254324.1	branched-chain amino acid transport system II carrier protein	91.5	14.3	53.8
MGA_760	LOCUS_07580	sequence14:18432..18911(-)	frameshift,internal_stop_codon	19064..19066(-)	18922,18451,18228,18366	WP_011254324.1	branched-chain amino acid transport system II carrier protein	91.8	31.6	57.5
MGA_761	LOCUS_07590	sequence14:19064..19183(-)	frameshift,internal_stop_codon	19064..19066(-)	18922	WP_011476479.1	branched-chain amino acid transport system II carrier protein	89.7	7.8	77.8
MGA_764	LOCUS_07620	sequence15:4551..4904(+)	frameshift		4901	WP_011254163.1	carboxymuconolactone decarboxylase family protein	100.0	48.1	82.1
MGA_765	LOCUS_07630	sequence15:4913..5272(+)	frameshift		4901	WP_011254163.1	carboxymuconolactone decarboxylase family protein	100.0	49.0	75.6
MGA_766	LOCUS_07640	sequence15:5363..6058(-)	internal_stop_codon	6110..6112(-)		WP_003546143.1	phosphoenolpyruvate carboxykinase (ATP)	100.0	41.8	92.2
MGA_767	LOCUS_07650	sequence15:6110..7021(-)	internal_stop_codon	6110..6112(-)		WP_003546143.1	phosphoenolpyruvate carboxykinase (ATP)	100.0	54.9	91.1
MGA_773	LOCUS_07710	sequence15:13167..13430(+)	frameshift,internal_stop_codon	13716..13718(+)	13376,13571,13583	WP_010905248.1	ABC transporter ATP-binding protein	78.2	11.1	50.0
MGA_774	LOCUS_07720	sequence15:13845..14222(+)	frameshift,internal_stop_codon	13797..13799(+),13713..13715(+),13578..13580(+)	13570	WP_011475588.1	ABC transporter ATP-binding protein	85.6	18.4	58.9
MGA_778	LOCUS_07760	sequence16:1423..1917(+)	internal_stop_codon	1915..1917(+)		WP_003549632.1	sugar ABC transporter permease	100.0	36.3	82.3
MGA_779	LOCUS_07770	sequence16:1921..2781(+)	internal_stop_codon	1915..1917(+)		WP_003549632.1	sugar ABC transporter permease	100.0	63.3	91.6
MGA_781	LOCUS_07790	sequence16:3713..3886(+)	partial			WP_011476527.1	Cof-type HAD-IIB family hydrolase	93.0	19.9	52.8
MGA_782	LOCUS_07800	sequence16:3936..4106(+)	partial			WP_011836481.1	Cof-type HAD-IIB family hydrolase	100.0	20.3	60.7
MGA_799	LOCUS_07970	sequence17:2612..3463(-)	partial			WP_003546206.1	SEC10/PgrA surface exclusion domain-containing protein	92.2	71.8	61.7
MGA_806	LOCUS_08040	sequence17:7031..7441(+)	partial			WP_010905975.1	phosphate-starvation-inducible protein PsiE	72.1	68.5	39.8
MGA_811	LOCUS_08090	sequence17:11155..11574(+)	partial			WP_111723554.1	IS3-like element ISHin1 family transposase	77.7	23.8	51.9
MGA_812	LOCUS_08100	sequence17:11578..12957(-)	partial			WP_011254515.1	YSIRK-type signal peptide-containing protein	68.8	38.2	24.2
MGA_818	LOCUS_08150	sequence18:2789..3286(+)	frameshift		3232	WP_003548446.1	hypothetical protein	98.8	73.0	41.2
MGA_823	LOCUS_08200	sequence18:7686..7838(+)	partial			WP_003706303.1	teichoic acid D-Ala incorporation-associated protein DltX	68.0	69.4	67.6
MGA_847	LOCUS_08440	sequence19:13298..13852(-)	frameshift,internal_stop_codon	13945..13947(-)	13860	WP_003549893.1	IS110 family transposase	84.8	38.2	41.0
MGA_870	LOCUS_08670	sequence22:3118..3531(-)	frameshift		3574	WP_003548818.1	glycerol-3-phosphate acyltransferase	100.0	66.8	67.2
MGA_871	LOCUS_08680	sequence22:3500..3733(-)	frameshift		3574	WP_003548818.1	glycerol-3-phosphate acyltransferase	68.8	25.9	75.5
MGA_897	LOCUS_08940	sequence23:16648..17109(-)	frameshift,internal_stop_codon	17173..17175(-)	16659	WP_003547855.1	uracil-DNA glycosylase	98.0	68.5	72.0
MGA_921	LOCUS_09180	sequence23:41184..41381(-)	frameshift		41319	WP_003547912.1	hypothetical protein	90.8	58.4	59.3
MGA_922	LOCUS_09190	sequence23:41275..41490(-)	frameshift		41319	WP_003547912.1	hypothetical protein	98.6	69.3	55.7
MGA_946	LOCUS_09430	sequence23:61900..62304(-)	partial			WP_003547954.1	YitT family protein	92.5	44.6	62.4
MGA_950	LOCUS_09470	sequence23:64771..65274(-)	internal_stop_codon	65293..65295(-)		WP_011101349.1	accessory Sec system glycosyltransferase Asp1	93.4	30.5	40.4
MGA_963	LOCUS_09600	sequence23:79552..79923(+)	frameshift		79516,79879	WP_011254446.1	ClC family H(+)/Cl(-) exchange transporter	93.5	25.7	67.0
MGA_964	LOCUS_09610	sequence23:79898..80686(+)	frameshift		79878	WP_011254446.1	ClC family H(+)/Cl(-) exchange transporter	99.6	58.3	66.3
MGA_987	LOCUS_09840	sequence23:101486..102628(+)	partial			WP_003548276.1	YfhO family protein	98.4	44.0	39.4
MGA_1016	LOCUS_10130	sequence23:129960..130532(+)	internal_stop_codon	130530..130532(+)		WP_004270929.1	IS30 family transposase	94.2	53.9	40.0
MGA_1017	LOCUS_10140	sequence23:130599..130862(+)	frameshift,internal_stop_codon	130530..130532(+)	130856	WP_010956682.1	IS30-like element ISTde2 family transposase	98.9	25.7	43.5
MGA_1021	LOCUS_10180	sequence24:799..1062(+)	internal_stop_codon	1060..1062(+)		WP_050340461.1	site-specific integrase	100.0	44.6	97.7
MGA_1022	LOCUS_10190	sequence24:1174..1386(+)	internal_stop_codon	1060..1062(+)		WP_050340461.1	site-specific integrase	100.0	35.9	94.3
MGA_1024	LOCUS_10210	sequence24:2153..2326(+)	partial			WP_010625611.1	hypothetical protein	91.2	74.3	92.3
MGA_1025	LOCUS_10220	sequence24:2481..2696(-)	partial			WP_103152732.1	IS5 family transposase	100.0	27.1	98.6
MGA_1028	LOCUS_10250	sequence24:5968..6198(-)	frameshift,internal_stop_codon	5968..5970(-),6229..6231(-)	6367	WP_002291207.1	multidrug efflux MFS transporter EfmA	98.7	17.5	57.3
MGA_1029	LOCUS_10260	sequence24:6359..6853(-)	frameshift,internal_stop_codon	6228..6230(-)	6729,6363	WP_187289197.1	MFS transporter	65.9	25.4	56.5
MGA_1030	LOCUS_10270	sequence24:7013..7216(-)	partial			WP_011241757.1	MobQ family relaxase	59.7	5.8	92.5
MGA_1033	LOCUS_10300	sequence24:10739..11008(+)	frameshift		10584	WP_003644345.1	universal stress protein	95.5	55.3	45.3
MGA_1034	LOCUS_10310	sequence24:11235..11594(-)	partial			WP_016381870.1	hypothetical protein	100.0	70.8	99.2
MGA_1036	LOCUS_10330	sequence24:12023..12499(-)	partial			WP_061777522.1	hypothetical protein	100.0	62.5	91.8
MGA_1053	LOCUS_10500	sequence27:184..474(+)	frameshift,internal_stop_codon	481..483(+),130..132(+)	441,468	WP_011254296.1	DedA family protein	90.6	42.6	62.1
MGA_1054	LOCUS_10510	sequence27:690..1745(+)	frameshift		1700	WP_015613351.1	amino acid permease	97.4	74.2	73.4
MGA_1055	LOCUS_10520	sequence27:1751..2074(+)	frameshift		1700	WP_015613351.1	amino acid permease	98.1	22.8	67.6
MGA_1056	LOCUS_10530	sequence27:2138..2581(-)	internal_stop_codon	2582..2584(-)		WP_011254294.1	2-hydroxyacid dehydrogenase family protein	99.3	46.7	56.0
MGA_1057	LOCUS_10540	sequence27:2582..2713(-)	internal_stop_codon	2582..2584(-)		WP_011254294.1	2-hydroxyacid dehydrogenase family protein	100.0	13.4	74.4
MGA_1059	LOCUS_10560	sequence27:3704..4234(-)	frameshift,internal_stop_codon	3703..3705(-)	4267,4189,4295	WP_003547045.1	aldo/keto reductase	92.0	59.8	73.5
MGA_1069	LOCUS_10660	sequence28:2015..3154(+)	frameshift		3139	WP_011922226.1	DEAD/DEAH box helicase family protein	98.4	36.6	50.7
MGA_1070	LOCUS_10670	sequence28:3526..5082(+)	partial			WP_011922226.1	DEAD/DEAH box helicase family protein	91.5	46.2	44.4
MGA_1076	LOCUS_10730	sequence29:1843..2301(-)	frameshift		1851	WP_011254154.1	TIGR01906 family membrane protein	98.7	74.3	71.3
MGA_1088	LOCUS_10840	sequence30:2792..3058(-)	frameshift		3099	WP_010905898.1	MFS transporter	93.2	17.8	52.4
MGA_1089	LOCUS_10850	sequence30:3076..3318(-)	frameshift		3090	WP_011673958.1	MFS transporter	77.5	13.6	41.9
MGA_1090	LOCUS_10860	sequence30:3311..3808(-)	internal_stop_codon	3824..3826(-)		WP_003548076.1	GyrI-like domain-containing protein	95.8	76.0	67.1
MGA_1091	LOCUS_10870	sequence30:3824..3958(-)	internal_stop_codon	3824..3826(-)		WP_003548076.1	GyrI-like domain-containing protein	100.0	21.2	65.9
MGA_1097	LOCUS_10930	sequence31:30..422(-)	frameshift,internal_stop_codon	511..513(-)	453	WP_051523200.1	helix-turn-helix transcriptional regulator	98.5	75.3	71.8
MGA_1129	LOCUS_11240	sequence34:10214..10405(-)	partial			WP_003548701.1	helix-turn-helix transcriptional regulator	100.0	23.4	38.1
MGA_1133	LOCUS_11280	sequence34:14184..14336(-)	frameshift,internal_stop_codon	14184..14186(-)	13961,13906	WP_003549600.1	DMT family transporter	98.0	15.9	73.5
MGA_1138	LOCUS_11330	sequence34:18721..19317(+)	frameshift		19290	WP_011254608.1	GMP reductase	99.0	58.5	87.8
MGA_1139	LOCUS_11340	sequence34:19257..19715(+)	frameshift		19290	WP_011254608.1	GMP reductase	92.1	42.4	90.0
MGA_1149	LOCUS_11440	sequence34:32209..32508(-)	partial			WP_003549336.1	DegV family protein	88.9	28.5	68.2
MGA_1159	LOCUS_11540	sequence34:44881..45699(-)	frameshift		45802	WP_003548323.1	adenosine deaminase	99.6	80.5	57.6
MGA_1162	LOCUS_11570	sequence34:48893..49117(-)	frameshift		49148	WP_003547484.1	peptidylprolyl isomerase	100.0	37.2	71.6
MGA_1163	LOCUS_11580	sequence34:49122..49478(-)	frameshift		49148	WP_003547484.1	peptidylprolyl isomerase	93.2	55.3	74.5
MGA_1179	LOCUS_11740	sequence34:67536..68066(-)	partial			WP_003547129.1	sodium:proton antiporter	99.4	32.8	58.3
MGA_1180	LOCUS_11750	sequence34:68072..68488(-)	frameshift		68544	WP_003547129.1	sodium:proton antiporter	100.0	25.9	47.1
MGA_1181	LOCUS_11760	sequence34:68491..68760(-)	frameshift		68544	WP_003547129.1	sodium:proton antiporter	77.5	13.1	54.9
MGA_1206	LOCUS_12010	sequence34:92146..92370(-)	partial			WP_003547057.1	lipopolysaccharide assembly protein LapA domain-containing protein	67.6	61.7	54.0
MGA_1209	LOCUS_12040	sequence34:94123..94497(-)	internal_stop_codon	94504..94506(-)		WP_025015105.1	acyltransferase family protein	100.0	19.4	73.4
MGA_1210	LOCUS_12050	sequence34:94504..96039(-)	internal_stop_codon	94504..94506(-)		WP_025015105.1	acyltransferase family protein	100.0	80.1	69.3
MGA_1219	LOCUS_12140	sequence36:63..233(-)	partial			WP_002287733.1	restriction endonuclease subunit S	80.4	10.9	77.8
MGA_1223	LOCUS_12180	sequence36:3250..3942(-)	partial			WP_002289238.1	collagen-binding MSCRAMM adhesin Acm	52.2	16.2	42.6
MGA_1224	LOCUS_12190	sequence36:4626..4829(+)	internal_stop_codon	4827..4829(+),4587..4589(+)		WP_011241777.1	recombinase family protein	100.0	34.5	98.5
MGA_1239	LOCUS_12330	sequence39:3405..3785(+)	frameshift		3770	WP_011948840.1	ROK family protein	90.5	36.1	50.9
MGA_1240	LOCUS_12340	sequence39:3802..4371(+)	frameshift		3770	WP_011101842.1	ROK family protein	94.2	55.0	45.3
MGA_1242	LOCUS_12360	sequence40:388..933(+)	partial			WP_011102090.1	SDR family oxidoreductase	70.7	50.9	32.2
MGA_1246	LOCUS_12400	sequence40:2499..2870(+)	frameshift		2864	WP_003547344.1	NUDIX hydrolase	98.4	58.5	70.2
MGA_1249	LOCUS_12420	sequence41:276..560(-)	partial			WP_068990772.1	IS66-like element short variant transposase	100.0	21.1	69.5
MGA_1253	LOCUS_12460	sequence42:231..803(-)	frameshift		858	WP_010932591.1	DEAD/DEAH box helicase family protein	84.2	16.0	38.5
MGA_1261	LOCUS_12500	sequence44:2721..3287(+)	partial			WP_003566887.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	60.1	37.2	36.3
MGA_1263	LOCUS_12520	sequence45:764..910(+)	partial			WP_003549428.1	SPJ_0845 family protein	58.3	57.1	85.7
MGA_1286	LOCUS_12750	sequence45:25715..26116(+)	frameshift		25640,26081	WP_003546833.1	YegS/Rv2252/BmrU family lipid kinase	91.0	38.4	59.5
MGA_1287	LOCUS_12760	sequence45:26134..26463(+)	frameshift		26080	WP_003546833.1	YegS/Rv2252/BmrU family lipid kinase	98.2	34.0	59.8
MGA_1304	LOCUS_12930	sequence45:41366..41647(-)	partial			WP_010906174.1	YggT family protein	75.3	72.5	42.9
MGA_1325	LOCUS_13140	sequence45:61952..62473(-)	frameshift		62475,62542	WP_003546764.1	pseudouridine synthase	100.0	73.3	68.2
MGA_1326	LOCUS_13150	sequence45:62510..62662(-)	frameshift		62475,62542	WP_003546764.1	pseudouridine synthase	80.0	16.9	77.5
MGA_1335	LOCUS_13240	sequence46:228..446(-)	partial			WP_050340461.1	site-specific integrase	98.6	36.4	73.2
MGA_1342	LOCUS_13290	sequence48:116..385(-)	frameshift,internal_stop_codon	573..575(-)	485	WP_003549893.1	IS110 family transposase	88.8	19.4	91.1
MGA_1343	LOCUS_13300	sequence48:747..974(-)	frameshift,internal_stop_codon	573..575(-)	770,491,740	WP_003549893.1	IS110 family transposase	92.0	16.9	87.0
MGA_1348	LOCUS_13350	sequence49:2159..2524(+)	partial			WP_011101571.1	restriction endonuclease	89.3	34.4	50.9
MGA_1353	LOCUS_13400	sequence51:1592..>2163(-)	partial			WP_011254065.1	pore-forming S-layer protein SlpA	73.5	34.0	40.1
MGA_1355	LOCUS_13420	sequence54:3..350(-)	frameshift		411,351	WP_165492900.1	IS3 family transposase	100.0	28.5	79.1
MGA_1356	LOCUS_13430	sequence54:340..1332(-)	frameshift		411,351	WP_165492900.1	IS3 family transposase	75.5	62.5	59.1
MGA_1359	LOCUS_13460	sequence55:969..1523(-)	frameshift		977	WP_015613420.1	GHKL domain-containing protein	97.3	54.9	51.4
MGA_1361	LOCUS_13480	sequence56:1198..1866(-)	partial			WP_003549951.1	hypothetical protein	90.5	57.6	33.7
MGA_1367	LOCUS_13540	sequence56:5880..6272(-)	internal_stop_codon	6309..6311(-)		WP_003547397.1	L,D-transpeptidase	97.7	62.9	75.6
MGA_1372	LOCUS_13590	sequence56:10352..10636(-)	frameshift,internal_stop_codon	10352..10354(-)	10652	WP_011101592.1	DHA2 family efflux MFS transporter permease subunit	97.9	19.8	38.0
MGA_1373	LOCUS_13600	sequence56:10608..10985(-)	frameshift,internal_stop_codon	10352..10354(-),11031..11033(-)	10652	WP_011101592.1	DHA2 family efflux MFS transporter permease subunit	60.0	16.2	44.0
MGA_1374	LOCUS_13610	sequence56:11031..11249(-)	internal_stop_codon	11031..11033(-)		WP_011101592.1	DHA2 family efflux MFS transporter permease subunit	88.9	13.8	57.8
MGA_1377	LOCUS_13640	sequence56:13563..14486(+)	partial			WP_003547408.1	DNA/RNA non-specific endonuclease	63.5	69.4	64.6
MGA_1378	LOCUS_13650	sequence56:14509..14784(-)	partial			WP_011254095.1	hypothetical protein	67.0	67.7	47.8
MGA_1380	LOCUS_13670	sequence56:15645..16478(-)	partial			WP_003644407.1	lipoprotein	76.9	73.8	36.9
MGA_1383	LOCUS_13700	sequence56:18838..19020(-)	frameshift		18840	WP_003546204.1	peptidoglycan-binding protein	56.7	14.7	82.4
MGA_1394	LOCUS_13810	sequence56:29793..30401(-)	internal_stop_codon	30402..30404(-)		WP_011254634.1	peptide ABC transporter substrate-binding protein	99.0	36.9	85.0
MGA_1395	LOCUS_13820	sequence56:30402..31424(-)	internal_stop_codon	30402..30404(-)		WP_011254634.1	peptide ABC transporter substrate-binding protein	100.0	62.5	85.0
MGA_1397	LOCUS_13840	sequence56:33383..33985(-)	internal_stop_codon	34076..34078(-)		WP_003549462.1	Cof-type HAD-IIB family hydrolase	99.5	76.3	43.8
MGA_1403	LOCUS_13900	sequence56:38853..39482(-)	internal_stop_codon	39525..39527(-)		WP_003547989.1	alpha/beta hydrolase	100.0	69.8	55.2
MGA_1404	LOCUS_13910	sequence56:39525..39749(-)	internal_stop_codon	39525..39527(-)		WP_003547989.1	alpha/beta hydrolase	94.6	23.5	61.4
MGA_1411	LOCUS_13980	sequence56:45876..47144(-)	partial			WP_000145511.1	replication initiation protein	50.9	73.1	30.4
MGA_1417	LOCUS_14040	sequence56:53539..53862(+)	internal_stop_codon	53860..53862(+)		WP_003547186.1	serine hydrolase	74.8	22.0	56.2
MGA_1418	LOCUS_14050	sequence56:53905..54414(+)	internal_stop_codon	53860..53862(+)		WP_003547186.1	serine hydrolase	50.9	23.9	58.6
MGA_1422	LOCUS_14090	sequence56:57775..61047(+)	partial			WP_007058870.1	DEAD/DEAH box helicase	68.0	59.3	38.1
MGA_1424	LOCUS_14110	sequence56:61642..61956(-)	frameshift,internal_stop_codon	62157..62159(-)	61967	WP_011254465.1	MDR family MFS transporter	99.0	21.0	89.3
MGA_1425	LOCUS_14120	sequence56:61953..62153(-)	frameshift,internal_stop_codon	62157..62159(-)	61970	WP_011254465.1	MDR family MFS transporter	98.5	13.3	86.2
MGA_1426	LOCUS_14130	sequence56:62157..62792(-)	frameshift,internal_stop_codon	62156..62158(-)	61969,62797	WP_011254465.1	MDR family MFS transporter	99.5	42.9	88.1
MGA_1427	LOCUS_14140	sequence56:62762..63112(-)	frameshift		62797	WP_011254465.1	MDR family MFS transporter	94.0	22.2	88.1
MGA_1428	LOCUS_14150	sequence56:63187..63489(+)	partial			WP_011948690.1	FAD-binding oxidoreductase	94.0	20.2	50.0
MGA_1435	LOCUS_14220	sequence58:3..539(-)	partial			WP_011100975.1	DUF2075 domain-containing protein	93.8	41.5	42.5
MGA_1437	LOCUS_14240	sequence59:157..363(+)	frameshift		264	WP_196835716.1	adenine-specific methyltransferase EcoRI family protein	48.5	7.2	66.7
MGA_1438	LOCUS_14250	sequence59:291..560(+)	frameshift		264	WP_196835716.1	adenine-specific methyltransferase EcoRI family protein	89.9	18.7	42.7
MGA_1449	LOCUS_14310	sequence66:216..614(-)	frameshift		664	WP_003547489.1	YoaK family protein	95.5	53.6	46.0
MGA_1456	LOCUS_14380	sequence67:5447..5653(-)	partial			WP_003547715.1	M23 family metallopeptidase	60.3	19.2	61.0
MGA_1469	LOCUS_14510	sequence67:17851..18135(-)	frameshift		18127	WP_003547614.1	8-oxo-dGTP diphosphatase	97.9	63.0	70.7
MGA_1470	LOCUS_14520	sequence67:18101..18277(-)	frameshift		18127	WP_003547614.1	8-oxo-dGTP diphosphatase	86.2	34.2	86.0
MGA_1473	LOCUS_14550	sequence67:19905..20702(+)	frameshift		20621	WP_003547606.1	peptidase T	89.8	57.3	94.1
MGA_1474	LOCUS_14560	sequence67:20732..21136(+)	frameshift		20621	WP_003547606.1	peptidase T	100.0	32.3	91.8
MGA_1511	LOCUS_14870	sequence74:34..234(-)	frameshift		278	WP_003549336.1	DegV family protein	98.5	21.0	67.7
MGA_1512	LOCUS_14880	sequence74:153..707(-)	frameshift		278	WP_003549336.1	DegV family protein	76.6	45.6	70.9
MGA_1514	LOCUS_14890	sequence76:92..322(-)	partial			WP_011475674.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	59.2	11.5	84.4
MGA_1522	LOCUS_14950	sequence78:8441..8581(+)	frameshift		8569	WP_003548490.1	cupin domain-containing protein	78.3	26.3	75.0
MGA_1546	LOCUS_15190	sequence78:31689..31847(+)	frameshift		32028,31823	WP_011254010.1	C69 family dipeptidase	86.5	9.7	95.6
MGA_1547	LOCUS_15200	sequence78:32064..32750(+)	frameshift		32028,31823	WP_011254010.1	C69 family dipeptidase	98.7	51.5	75.0
MGA_1549	LOCUS_15220	sequence78:34510..35640(+)	partial			WP_003548356.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	95.7	70.2	95.8
MGA_1553	LOCUS_15260	sequence78:39214..42690(+)	partial			WP_010891879.1	Eco57I restriction-modification methylase domain-containing protein	58.2	58.7	26.3
MGA_1554	LOCUS_15270	sequence78:42690..46142(+)	partial			WP_000401853.1	helicase-related protein	73.1	80.3	24.3
MGA_1555	LOCUS_15280	sequence78:46186..46593(+)	partial			WP_011705524.1	LysR family transcriptional regulator	67.4	30.9	31.9
MGA_1560	LOCUS_15330	sequence78:49878..50819(+)	partial			WP_179238099.1	FAD-binding protein	77.0	38.5	34.4
MGA_1562	LOCUS_15350	sequence78:51056..52312(+)	internal_stop_codon	51047..51049(+)		WP_002352327.1	FAD-dependent oxidoreductase	95.0	83.9	30.0
MGA_1565	LOCUS_15380	sequence79:10..>587(-)	partial			WP_127742798.1	class III lanthionine synthetase LanKC	74.3	16.3	35.0
MGA_1592	LOCUS_15580	sequence89:15391..15843(+)	frameshift		15334	WP_003642965.1	SDR family oxidoreductase	100.0	70.3	60.0
MGA_1596	LOCUS_15620	sequence89:18776..18997(+)	frameshift		19031	WP_003548719.1	ABC transporter substrate-binding protein/permease	65.8	9.8	62.5
MGA_1613	LOCUS_15790	sequence89:36381..36704(-)	partial			WP_011254059.1	DNA-3-methyladenine glycosylase I	80.4	45.3	58.1