{ "type": "genome", "identifier": "GCF_001436025.1", "organism": "Limosilactobacillus mucosae DSM 13345", "title": "Limosilactobacillus mucosae DSM 13345", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Shanghai Majorbio", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001436025.1", "bioproject": "PRJNA224116", "biosample": "SAMN02369406", "wgs_master": "AZEQ00000000.1", "refseq_category": "na", "taxid": "1423771", "species_taxid": "97478", "organism_name": "Limosilactobacillus mucosae DSM 13345", "infraspecific_name": "strain=DSM 13345", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2015/11/06", "asm_name": "ASM143602v1", "asm_submitter": "Shanghai Majorbio", "gbrs_paired_asm": "GCA_001436025.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/436/025/GCF_001436025.1_ASM143602v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2254291", "genome_size_ungapped": "2254291", "gc_percent": "46.500000", "replicon_count": "0", "scaffold_count": "91", "contig_count": "91", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001436025.1-RS_2024_04_01", "annotation_date": "2024-04-01", "total_gene_count": "2107", "protein_coding_gene_count": "2010", "non_coding_gene_count": "50", "pubmed_id": "26415554" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2015-11-06", "dateModified": "2015-11-06", "datePublished": "2015-11-06", "_annotation": { "sample_count": 1, "sample_organism": [ "Limosilactobacillus mucosae DSM 13345" ], "sample_taxid": [ "1423771" ], "sample_host_organism": [ "pig" ], "sample_host_organism_id": [], "sample_host_disease": [], 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Limosilactobacillus fermentum", "strain": "strain=ATCC 14931", "accession": "GCA_000159215.1", "taxid": 1613, "species_taxid": 1613, "relation_to_type": "type", "validated": true, "ani": 78.3906, "matched_fragments": 78, "total_fragments": 711, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Limosilactobacillus panis", "strain": "strain=DSM 6035", "accession": "GCA_001435935.1", "taxid": 47493, "species_taxid": 47493, "relation_to_type": "type", "validated": true, "ani": 78.2754, "matched_fragments": 75, "total_fragments": 711, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Limosilactobacillus panis", "strain": "strain=DSM 6035", "accession": "GCA_001027985.1", "taxid": 47493, "species_taxid": 47493, "relation_to_type": "type", "validated": true, "ani": 78.2098, "matched_fragments": 74, "total_fragments": 711, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Limosilactobacillus gorillae", "strain": "strain=KZ01", "accession": "GCA_001293735.1", "taxid": 1450649, "species_taxid": 1450649, "relation_to_type": "type", "validated": true, "ani": 78.166, "matched_fragments": 64, "total_fragments": 711, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Limosilactobacillus secaliphilus", "strain": "strain=DSM 17896", "accession": "GCA_001437055.1", "taxid": 396268, "species_taxid": 396268, "relation_to_type": "type", "validated": true, "ani": 78.0591, "matched_fragments": 89, "total_fragments": 711, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Limosilactobacillus oris", "strain": "strain=DSM 4864", "accession": "GCA_001434465.1", "taxid": 1632, "species_taxid": 1632, "relation_to_type": "type", "validated": true, "ani": 77.976, "matched_fragments": 82, "total_fragments": 711, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Limosilactobacillus equigenerosi", 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