# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_17	LOCUS_00170	sequence01:13736..14020(-)	frameshift		14153	WP_003641545.1	YebC/PmpR family DNA-binding transcriptional regulator	95.7	37.2	51.1
MGA_18	LOCUS_00180	sequence01:14100..14477(-)	frameshift		14153	WP_011475744.1	YebC/PmpR family DNA-binding transcriptional regulator	86.4	44.6	79.6
MGA_36	LOCUS_00360	sequence01:30595..30930(-)	partial			WP_003645451.1	preprotein translocase subunit YajC	76.6	66.9	57.6
MGA_66	LOCUS_00660	sequence01:65002..65388(-)	partial			WP_003564982.1	membrane protein insertion efficiency factor YidD	45.3	58.4	50.8
MGA_114	LOCUS_01140	sequence01:108263..108526(-)	partial			WP_002297107.1	YlbG family protein	73.6	57.1	43.8
MGA_138	LOCUS_01380	sequence01:131449..131730(-)	partial			WP_002355902.1	YggT family protein	69.9	78.8	55.2
MGA_153	LOCUS_01530	sequence01:146834..147415(+)	partial			WP_003644620.1	copper homeostasis protein CutC	75.1	70.3	40.3
MGA_159	LOCUS_01590	sequence01:152367..153434(-)	partial			WP_011475733.1	competence protein CoiA family protein	67.0	80.9	34.3
MGA_174	LOCUS_01740	sequence02:9945..10922(-)	frameshift		11165	WP_011101342.1	amino acid permease	99.1	70.0	71.1
MGA_175	LOCUS_01750	sequence02:10900..11100(-)	frameshift		11165	WP_011101342.1	amino acid permease	77.3	11.1	76.5
MGA_186	LOCUS_01860	sequence02:19054..19464(-)	frameshift		19523	WP_003643931.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	100.0	53.3	76.5
MGA_187	LOCUS_01870	sequence02:19494..19805(-)	frameshift		19523	WP_003702630.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	90.3	36.7	58.1
MGA_203	LOCUS_02030	sequence03:45..197(-)	internal_stop_codon	228..230(-)		WP_003644291.1	helix-turn-helix domain-containing protein	94.0	40.9	57.4
MGA_204	LOCUS_02040	sequence03:228..386(-)	internal_stop_codon	228..230(-)		WP_003644291.1	helix-turn-helix domain-containing protein	94.2	42.6	57.1
MGA_214	LOCUS_02140	sequence03:8553..9062(+)	partial			WP_011068757.1	sugar porter family MFS transporter	56.8	18.6	65.6
MGA_224	LOCUS_02240	sequence03:18026..18775(-)	internal_stop_codon	18782..18784(-)		WP_011101726.1	mannose-6-phosphate isomerase, class I	94.4	73.2	40.8
MGA_225	LOCUS_02250	sequence03:18782..18937(-)	internal_stop_codon	18782..18784(-)		WP_001127960.1	class I mannose-6-phosphate isomerase	100.0	16.3	47.1
MGA_229	LOCUS_02290	sequence03:20860..21180(+)	partial			WP_011101586.1	daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein	96.2	32.6	51.0
MGA_230	LOCUS_02300	sequence03:21155..21448(+)	partial			WP_011101586.1	daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein	97.9	31.0	32.0
MGA_255	LOCUS_02550	sequence04:17976..18782(-)	partial			WP_201626891.1	ABC transporter ATP-binding protein	88.8	47.7	27.0
MGA_261	LOCUS_02610	sequence05:921..1628(+)	partial			WP_011674353.1	CdaR family protein	94.5	61.2	46.4
MGA_264	LOCUS_02640	sequence05:4439..5578(+)	partial			WP_010989592.1	bacterial Ig-like domain-containing protein	65.4	11.9	33.0
MGA_295	LOCUS_02940	sequence06:8597..8941(-)	frameshift		8997	WP_003702329.1	sulfite exporter TauE/SafE family protein	100.0	40.6	78.1
MGA_296	LOCUS_02950	sequence06:8968..9441(-)	frameshift		9003	WP_011101335.1	sulfite exporter TauE/SafE family protein	80.9	45.2	66.1
MGA_304	LOCUS_03030	sequence06:16716..16961(+)	partial			WP_003567447.1	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	100.0	25.7	50.6
MGA_309	LOCUS_03080	sequence06:21806..22762(+)	internal_stop_codon	22760..22762(+)		WP_002263138.1	pyridoxal phosphate-dependent aminotransferase	99.1	81.1	49.5
MGA_320	LOCUS_03190	sequence07:10709..11221(-)	internal_stop_codon	11282..11284(-)		WP_003641033.1	argininosuccinate synthase	96.5	39.9	68.3
MGA_321	LOCUS_03200	sequence07:11282..11920(-)	internal_stop_codon	11282..11284(-)		WP_003641033.1	argininosuccinate synthase	99.5	51.3	71.1
MGA_333	LOCUS_03320	sequence07:23383..24102(-)	frameshift,internal_stop_codon	24130..24132(-)	23427	WP_003568836.1	gluconate:H+ symporter	95.4	50.7	53.9
MGA_334	LOCUS_03330	sequence07:24130..>24632(-)	internal_stop_codon	24130..24132(-)		WP_003568836.1	gluconate:H+ symporter	84.9	31.3	72.3
MGA_336	LOCUS_03350	sequence08:801..1112(+)	partial			WP_003644761.1	MerR family transcriptional regulator	98.1	70.1	54.5
MGA_355	LOCUS_03540	sequence08:15286..15498(-)	partial			WP_050340461.1	site-specific integrase	100.0	35.9	94.3
MGA_376	LOCUS_03750	sequence09:8153..8707(-)	frameshift		8720	WP_011102124.1	DMT family transporter	91.8	56.0	55.6
MGA_377	LOCUS_03760	sequence09:8691..9080(-)	frameshift		8708	WP_003700189.1	DMT family transporter	96.1	40.0	59.7
MGA_378	LOCUS_03770	sequence09:9191..11893(-)	partial			WP_011100953.1	MMPL family transporter	80.4	52.7	41.6
MGA_382	LOCUS_03810	sequence09:15679..17031(+)	partial			WP_011476570.1	AAA family ATPase	60.4	29.3	45.5
MGA_401	LOCUS_03990	sequence10:17692..18048(+)	internal_stop_codon	18046..18048(+)		WP_011476462.1	HAD-IC family P-type ATPase	78.0	10.4	44.6
MGA_402	LOCUS_04000	sequence10:18055..18627(+)	internal_stop_codon	18046..18048(+)		WP_003596096.1	HAD-IC family P-type ATPase	94.7	19.9	57.8
MGA_403	LOCUS_04010	sequence10:18638..19027(+)	partial			WP_003596096.1	HAD-IC family P-type ATPase	95.3	13.6	42.7
MGA_407	LOCUS_04050	sequence10:21919..22233(+)	partial			WP_011254591.1	ABC transporter permease	75.0	22.1	61.5
MGA_410	LOCUS_04070	sequence11:645..1397(-)	partial			WP_004255227.1	biotin--[acetyl-CoA-carboxylase] ligase	84.8	68.7	31.8
MGA_427	LOCUS_04240	sequence11:15281..15859(-)	partial			WP_002267537.1	mutanobactin A biosynthesis phosphopantetheinyl transferase MubP	76.0	60.4	30.2
MGA_432	LOCUS_04290	sequence11:19267..19989(-)	internal_stop_codon	20077..20079(-)		WP_011674763.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	99.6	60.2	46.0
MGA_452	LOCUS_04480	sequence12:22173..22535(+)	frameshift,internal_stop_codon	22533..22535(+)	22652	WP_011476411.1	glutamate/gamma-aminobutyrate family transporter YjeM	95.0	23.0	60.5
MGA_453	LOCUS_04490	sequence12:22709..23467(+)	frameshift,internal_stop_codon	22533..22535(+)	22655	WP_003548106.1	glutamate/gamma-aminobutyrate family transporter YjeM	80.6	42.0	42.7
MGA_457	LOCUS_04530	sequence12:25281..25475(-)	partial			WP_002293716.1	ribosome maturation factor RimM	98.4	36.4	62.5
MGA_458	LOCUS_04540	sequence12:25504..25698(-)	partial			WP_002293716.1	ribosome maturation factor RimM	98.4	36.4	62.5
MGA_459	LOCUS_04550	sequence12:25727..25921(-)	partial			WP_002293716.1	ribosome maturation factor RimM	98.4	36.4	62.5
MGA_500	LOCUS_04960	sequence12:61918..62334(-)	frameshift,internal_stop_codon	61936..61938(-)	61950	WP_011475812.1	5-formyltetrahydrofolate cyclo-ligase	71.7	57.7	40.0
MGA_533	LOCUS_05290	sequence12:91865..94156(-)	partial			WP_011101414.1	DNA translocase FtsK	59.2	45.3	68.6
MGA_547	LOCUS_05430	sequence12:106418..106762(-)	partial			WP_003577841.1	ISL3 family transposase	87.7	24.4	52.5
MGA_548	LOCUS_05440	sequence12:106859..107131(+)	frameshift		107080,107171	WP_011674394.1	ISL3 family transposase	78.9	17.7	54.9
MGA_549	LOCUS_05450	sequence12:107212..107697(+)	frameshift		107080,107171	WP_011674524.1	ISL3 family transposase	85.7	33.3	58.0
MGA_557	LOCUS_05530	sequence12:115167..116021(-)	partial			WP_011101964.1	DNA/RNA non-specific endonuclease	76.8	69.1	56.4
MGA_562	LOCUS_05580	sequence12:120074..121267(-)	partial			WP_005812744.1	C40 family peptidase	23.7	37.7	49.5
MGA_566	LOCUS_05620	sequence12:123213..124286(-)	frameshift		124321	WP_011102082.1	alpha-glucosidase	99.2	61.8	46.2
MGA_567	LOCUS_05630	sequence12:124283..124495(-)	frameshift		124315,124734,124583	WP_011674766.1	alpha-glucosidase	81.4	10.5	74.1
MGA_568	LOCUS_05640	sequence12:124575..124730(-)	frameshift		124793,124326,124724,124582	WP_011254098.1	alpha-glucosidase	92.2	8.7	72.3
MGA_573	LOCUS_05690	sequence12:130681..130866(-)	partial			WP_010706497.1	autolysin	98.4	42.8	48.3
MGA_576	LOCUS_05720	sequence12:132687..132893(-)	partial			WP_003244697.1	phage terminase small subunit	73.5	18.5	52.0
MGA_577	LOCUS_05730	sequence12:133055..133258(+)	partial			WP_003593049.1	DNA-3-methyladenine glycosylase I	97.0	34.0	55.4
MGA_589	LOCUS_05850	sequence12:146125..146760(-)	internal_stop_codon	146875..146877(-)		WP_011101896.1	5-(carboxyamino)imidazole ribonucleotide synthase	92.4	51.9	55.1
MGA_590	LOCUS_05860	sequence12:146875..147261(-)	internal_stop_codon	146875..146877(-)		WP_003733237.1	5-(carboxyamino)imidazole ribonucleotide synthase	98.4	33.7	55.6
MGA_596	LOCUS_05920	sequence13:2067..2471(-)	partial			WP_022638009.1	hypothetical protein	94.0	23.7	28.6
MGA_597	LOCUS_05930	sequence13:3373..3618(-)	partial			WP_003640390.1	ABC transporter ATP-binding protein	98.8	31.5	57.5
MGA_605	LOCUS_06010	sequence13:12305..12712(-)	frameshift		12755	WP_004530900.1	MFS transporter	77.0	26.4	27.9
MGA_606	LOCUS_06020	sequence13:13052..13573(+)	partial			WP_011101031.1	MFS transporter	98.8	43.9	55.9
MGA_622	LOCUS_06160	sequence14:11647..12237(+)	partial			WP_003404446.1	NADPH-dependent FMN reductase	63.3	61.4	35.4
MGA_624	LOCUS_06180	sequence14:13170..13490(+)	partial			WP_002896624.1	DUF536 domain-containing protein	90.6	45.7	38.5
MGA_626	LOCUS_06200	sequence14:13975..14382(-)	internal_stop_codon	14536..14538(-)		WP_011673939.1	sulfite exporter TauE/SafE family protein	88.9	46.7	31.7
MGA_628	LOCUS_06220	sequence14:14536..14727(-)	internal_stop_codon	14536..14538(-)		WP_003644715.1	sulfite exporter TauE/SafE family protein	96.8	24.1	50.0
MGA_656	LOCUS_06500	sequence16:11629..11823(+)	partial			WP_003580999.1	energy-coupling factor ABC transporter ATP-binding protein	96.9	22.3	50.0
MGA_657	LOCUS_06510	sequence16:11944..12546(+)	partial			WP_003398469.1	ATP-binding cassette domain-containing protein	57.5	50.2	36.7
MGA_660	LOCUS_06540	sequence16:13422..14201(-)	internal_stop_codon	14259..14261(-)		WP_011254002.1	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	97.7	81.2	50.4
MGA_670	LOCUS_06640	sequence17:6930..7418(+)	partial			WP_003599776.1	hypothetical protein	66.7	47.2	29.4
MGA_713	LOCUS_07050	sequence21:3409..3768(+)	partial			WP_002321171.1	2-hydroxyacid dehydrogenase	98.3	34.0	41.9
MGA_729	LOCUS_07210	sequence22:8077..8406(-)	partial			WP_003550021.1	GNAT family N-acetyltransferase	98.2	62.6	49.5
MGA_732	LOCUS_07240	sequence23:4443..4607(+)	internal_stop_codon	4431..4433(+)		WP_011101886.1	carbamoyl-phosphate synthase large subunit	100.0	5.1	63.0
MGA_744	LOCUS_07360	sequence23:15465..15944(-)	frameshift,internal_stop_codon	15999..16001(-)	16194	WP_003817916.1	amino acid permease	99.4	33.3	69.6
MGA_745	LOCUS_07370	sequence23:16129..16839(-)	frameshift,internal_stop_codon	15999..16001(-)	16849,16194	WP_007051261.1	amino acid permease	89.4	43.6	68.4
MGA_761	LOCUS_07530	sequence23:31192..31755(-)	frameshift		31203	WP_003641021.1	DUF421 domain-containing protein	70.1	62.4	51.9
MGA_769	LOCUS_07610	sequence23:38138..38365(+)	frameshift,internal_stop_codon	38498..38500(+)	38326	WP_011836413.1	oxidoreductase	96.0	26.2	51.4
MGA_770	LOCUS_07620	sequence23:38365..38499(+)	frameshift,internal_stop_codon	38498..38500(+)	38323	WP_010905879.1	oxidoreductase	97.7	15.9	69.8
MGA_771	LOCUS_07630	sequence23:38530..38949(+)	frameshift,internal_stop_codon	38498..38500(+)	38323	WP_010905879.1	oxidoreductase	97.1	50.0	46.7
MGA_793	LOCUS_07850	sequence23:59847..60710(-)	frameshift		60787	WP_003642253.1	Nramp family divalent metal transporter	97.6	52.6	72.5
MGA_794	LOCUS_07860	sequence23:60773..61198(-)	frameshift		60793	WP_003642253.1	Nramp family divalent metal transporter	94.3	25.1	83.5
MGA_807	LOCUS_07990	sequence23:69915..70208(+)	partial			WP_011476075.1	sigma-70 family RNA polymerase sigma factor	80.4	43.9	33.3
MGA_810	LOCUS_08020	sequence23:71122..71376(+)	partial			WP_003246452.1	3-hexulose-6-phosphate synthase	86.9	34.8	45.2
MGA_814	LOCUS_08060	sequence23:73062..73325(-)	frameshift,internal_stop_codon	73359..73361(-)	73392	WP_010919021.1	LacI family DNA-binding transcriptional regulator	93.1	23.8	37.0
MGA_819	LOCUS_08110	sequence23:78643..79926(-)	partial			WP_000608644.1	IS1380-like element ISEcp1 family transposase	70.7	75.0	29.6
MGA_820	LOCUS_08120	sequence23:80162..80458(+)	partial			WP_050340461.1	site-specific integrase	78.6	39.5	76.6
MGA_821	LOCUS_08130	sequence23:80401..80562(+)	partial			WP_050340461.1	site-specific integrase	100.0	27.2	90.6
MGA_847	LOCUS_08390	sequence24:950..1363(+)	internal_stop_codon	1361..1363(+),914..916(+)		WP_011675021.1	SAM-dependent methyltransferase	95.6	52.6	47.3
MGA_848	LOCUS_08400	sequence24:1376..1555(+)	internal_stop_codon	1361..1363(+)		WP_011675021.1	SAM-dependent methyltransferase	98.3	23.3	62.1
MGA_857	LOCUS_08490	sequence25:1668..2090(+)	partial			WP_010905080.1	HD domain-containing protein	80.0	52.3	55.8
MGA_879	LOCUS_08690	sequence27:6955..7119(-)	partial			WP_011101283.1	DUF4422 domain-containing protein	94.4	19.8	58.8
MGA_882	LOCUS_08710	sequence28:2969..3613(+)	partial			WP_010989924.1	GW domain-containing glycosaminoglycan-binding protein	67.8	40.3	44.5
MGA_897	LOCUS_08840	sequence30:21..344(+)	internal_stop_codon	342..344(+)		WP_051965637.1	MFS transporter	98.1	21.2	34.3
MGA_910	LOCUS_08960	sequence31:2499..3905(-)	frameshift		3164,3118	WP_011476454.1	hypothetical protein	94.7	76.2	32.1
MGA_943	LOCUS_09260	sequence34:20953..21153(+)	partial			WP_003638914.1	30S ribosomal protein S21	71.2	75.8	93.6
MGA_991	LOCUS_09740	sequence34:70762..71430(+)	partial			WP_001052498.1	ABC transporter ATP-binding protein	79.7	60.0	32.3
MGA_1000	LOCUS_09810	sequence36:3235..3462(-)	partial			WP_003569078.1	IS3 family transposase	82.7	22.5	83.9
MGA_1003	LOCUS_09840	sequence37:1..3702(+)	partial			WP_002352269.1	glucosyltransferase GtfC	74.9	62.3	35.5
MGA_1009	LOCUS_09900	sequence39:400..690(-)	partial			WP_003731951.1	fluoride efflux transporter CrcB	85.4	63.6	35.4
MGA_1026	LOCUS_10020	sequence43:542..748(+)	frameshift,internal_stop_codon	747..749(+)	386	WP_008767582.1	beta-1,6-N-acetylglucosaminyltransferase	77.9	16.8	53.7
MGA_1027	LOCUS_10030	sequence43:836..1285(+)	internal_stop_codon	746..748(+)		WP_008767582.1	beta-1,6-N-acetylglucosaminyltransferase	83.9	34.5	36.0
MGA_1076	LOCUS_10520	sequence45:52010..52546(+)	frameshift		52516	WP_015381020.1	cardiolipin synthase	91.0	33.2	39.9
MGA_1077	LOCUS_10530	sequence45:52567..53478(+)	frameshift		52516	WP_015381020.1	cardiolipin synthase	100.0	61.8	57.4
MGA_1086	LOCUS_10600	sequence47:696..1358(+)	partial			WP_011674120.1	ISL3 family transposase	97.3	51.4	42.3
MGA_1092	LOCUS_10620	sequence50:119..403(+)	internal_stop_codon	401..403(+)		WP_011102097.1	phytoene desaturase family protein	96.8	18.3	52.7
MGA_1093	LOCUS_10630	sequence50:458..868(+)	internal_stop_codon	401..403(+)		WP_011102097.1	phytoene desaturase family protein	95.6	26.1	53.8
MGA_1123	LOCUS_10890	sequence56:25047..25328(-)	frameshift		25329	WP_003547839.1	GIY-YIG nuclease family protein	87.1	23.6	61.7
MGA_1148	LOCUS_11140	sequence56:49903..51012(-)	partial			WP_011101823.1	FAD-dependent oxidoreductase	45.3	37.0	68.3
MGA_1166	LOCUS_11210	sequence66:1040..1363(+)	internal_stop_codon	1361..1363(+)		WP_011101242.1	ATP-dependent Clp protease ATP-binding subunit	100.0	12.9	58.3
MGA_1167	LOCUS_11220	sequence66:1367..3499(+)	internal_stop_codon	1361..1363(+)		WP_011101242.1	ATP-dependent Clp protease ATP-binding subunit	99.6	84.9	65.9
MGA_1216	LOCUS_11710	sequence66:39125..39757(+)	internal_stop_codon	39755..39757(+)		WP_011476299.1	ATP-grasp domain-containing protein	100.0	55.4	47.1
MGA_1248	LOCUS_12020	sequence67:21548..22066(+)	partial			WP_010989527.1	DUF4097 domain-containing protein	85.5	39.1	28.9
MGA_1252	LOCUS_12060	sequence67:25660..26199(-)	partial			WP_011101020.1	DNA-directed RNA polymerase subunit delta	63.7	57.8	63.5
MGA_1292	LOCUS_12450	sequence68:18279..18770(-)	partial			WP_003583633.1	ABC transporter ATP-binding protein	99.4	54.5	55.6
MGA_1294	LOCUS_12470	sequence68:19542..21053(-)	partial			WP_011674015.1	TPM domain-containing protein	42.7	47.4	30.9
MGA_1297	LOCUS_12500	sequence68:23834..24217(-)	frameshift		24176	WP_011101716.1	DUF1648 domain-containing protein	83.5	52.9	32.7
MGA_1312	LOCUS_12640	sequence68:32892..33281(-)	partial			WP_011117494.1	RepB family plasmid replication initiator protein	93.8	43.1	36.1
