# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_10	LOCUS_00090	sequence003:6913..7416(-)	partial			WP_011101247.1	ISL3-like element ISP1 family transposase	91.0	36.2	37.5
MGA_21	LOCUS_00150	sequence008:3470..3733(-)	partial			WP_011241777.1	recombinase family protein	65.5	29.4	96.5
MGA_46	LOCUS_00400	sequence009:26402..29131(-)	partial			WP_207215633.1	MucBP domain-containing protein	30.4	23.8	33.5
MGA_51	LOCUS_00450	sequence009:32453..32884(-)	partial			WP_002289456.1	mannose/fructose/sorbose PTS transporter subunit IIB	86.7	38.9	35.9
MGA_65	LOCUS_00590	sequence009:48181..48378(-)	partial			WP_003644609.1	YggT family protein	93.8	70.9	80.3
MGA_112	LOCUS_01020	sequence015:2942..6358(-)	partial			WP_011101160.1	bacterial Ig-like domain-containing protein	36.6	19.4	50.8
MGA_114	LOCUS_01040	sequence015:7664..8761(+)	partial			WP_162303178.1	beta-N-acetylhexosaminidase	44.7	28.6	29.5
MGA_139	LOCUS_01290	sequence015:33901..34893(-)	partial			WP_011101187.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	80.0	48.6	89.8
MGA_140	LOCUS_01300	sequence015:34896..36089(-)	partial			WP_011101187.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	71.0	51.9	86.5
MGA_144	LOCUS_01340	sequence015:38150..38629(-)	partial			WP_003641117.1	hypothetical protein	23.3	21.9	89.2
MGA_173	LOCUS_01630	sequence015:68966..70990(-)	partial			WP_003243463.1	teichoic acid poly(glycerol phosphate) polymerase	60.1	53.9	43.7
MGA_184	LOCUS_01740	sequence015:85068..86918(+)	partial			WP_011101976.1	choice-of-anchor A family protein	56.0	42.7	53.4
MGA_253	LOCUS_02430	sequence015:159885..160250(-)	partial			WP_003643951.1	ComF family protein	100.0	52.7	59.5
MGA_368	LOCUS_03580	sequence016:13658..14425(-)	internal_stop_codon	14429..14431(-)		WP_011101275.1	PTS transporter subunit EIIC	96.9	56.8	76.1
MGA_369	LOCUS_03590	sequence016:14429..14971(-)	internal_stop_codon	14429..14431(-)		WP_011101275.1	PTS transporter subunit EIIC	98.3	40.9	70.8
MGA_410	LOCUS_03980	sequence018:720..1349(-)	partial			WP_010905898.1	MFS transporter	90.4	41.6	30.9
MGA_414	LOCUS_04000	sequence021:106..1041(+)	partial			WP_000145511.1	replication initiation protein	74.6	79.7	36.2
MGA_445	LOCUS_04310	sequence023:56..331(+)	partial			WP_003638551.1	response regulator transcription factor	100.0	39.9	98.9
MGA_447	LOCUS_04330	sequence023:2207..4186(+)	partial			WP_011101334.1	hypothetical protein	51.4	68.4	43.8
MGA_497	LOCUS_04830	sequence023:53147..53776(-)	partial			WP_010905475.1	hypothetical protein	67.9	57.3	30.2
MGA_498	LOCUS_04840	sequence023:54193..54444(-)	partial			WP_010774188.1	DUF4950 domain-containing protein	59.0	19.6	59.2
MGA_499	LOCUS_04850	sequence023:54543..55904(-)	partial			WP_010989481.1	hypothetical protein	51.4	76.2	32.5
MGA_521	LOCUS_05060	sequence023:70893..71828(-)	partial			WP_011101247.1	ISL3-like element ISP1 family transposase	99.7	73.8	57.4
MGA_561	LOCUS_05460	sequence023:117594..120719(-)	partial			WP_011101804.1	MucBP domain-containing protein	72.0	80.6	28.5
MGA_562	LOCUS_05470	sequence023:120907..124026(-)	partial			WP_010989982.1	lmo2396 family class 1 internalin	46.0	50.6	32.4
MGA_565	LOCUS_05500	sequence023:126055..129897(+)	partial			WP_011109529.1	BspA family leucine-rich repeat surface protein	20.6	27.7	31.4
MGA_593	LOCUS_05780	sequence023:159690..162143(+)	frameshift		162056,162131,162062	WP_011102031.1	BspA family leucine-rich repeat surface protein	58.9	56.3	32.7
MGA_594	LOCUS_05790	sequence023:162118..165018(+)	partial			WP_011109555.1	fibrinogen-binding MSCRAMM adhesin Fss2	84.6	44.9	28.3
MGA_607	LOCUS_05920	sequence023:176691..178118(-)	partial			WP_211696200.1	carboxylesterase/lipase family protein	77.7	72.0	31.5
MGA_668	LOCUS_06530	sequence023:239096..239377(-)	frameshift		239403	WP_003594590.1	zinc-binding dehydrogenase	64.5	19.7	50.0
MGA_669	LOCUS_06540	sequence023:239353..240003(-)	frameshift		239403	WP_003594590.1	zinc-binding dehydrogenase	98.6	70.5	47.0
MGA_673	LOCUS_06580	sequence023:243005..243631(+)	partial			WP_014565877.1	flavodoxin	65.9	36.1	37.2
MGA_675	LOCUS_06600	sequence023:244406..244900(+)	frameshift,internal_stop_codon	244898..244900(+)	245023	WP_011101601.1	NAD(P)H-binding protein	100.0	70.4	65.2
MGA_676	LOCUS_06610	sequence023:245253..245537(+)	partial			WP_001174452.1	aldo/keto reductase	92.6	30.7	66.7
MGA_740	LOCUS_07250	sequence023:315892..317574(+)	partial			WP_011101357.1	YhgE/Pip domain-containing protein	74.8	46.5	32.2
MGA_742	LOCUS_07270	sequence023:318341..319858(-)	partial			WP_011101357.1	YhgE/Pip domain-containing protein	63.8	33.7	35.0
MGA_746	LOCUS_07310	sequence023:323151..325082(-)	partial			WP_011476570.1	AAA family ATPase	98.4	68.5	36.2
MGA_755	LOCUS_07400	sequence023:335276..335575(-)	partial			WP_011101609.1	diacylglycerol kinase family protein	100.0	71.7	66.7
MGA_805	LOCUS_07900	sequence023:383149..385785(-)	partial			WP_011101641.1	translation initiation factor IF-2	69.4	71.0	94.6
MGA_859	LOCUS_08400	sequence027:51..1013(-)	partial			WP_011101957.1	ABC transporter transmembrane domain-containing protein	100.0	54.9	87.5
MGA_863	LOCUS_08440	sequence027:5935..6297(-)	partial			WP_220818393.1	IS630 family transposase	93.3	43.1	58.0
MGA_883	LOCUS_08640	sequence027:30287..32572(-)	partial			WP_011101976.1	choice-of-anchor A family protein	61.5	55.8	59.8
MGA_895	LOCUS_08760	sequence027:44858..47554(-)	partial			WP_011101221.1	MucBP domain-containing protein	26.8	19.3	26.3
MGA_897	LOCUS_08780	sequence027:48947..49141(-)	partial			WP_003642209.1	hypothetical protein	70.3	70.3	64.4
MGA_903	LOCUS_08840	sequence028:66..890(-)	internal_stop_codon	66..68(-),978..980(-)		WP_011222029.1	type IA DNA topoisomerase	100.0	38.5	95.6
MGA_915	LOCUS_08930	sequence035:5089..6792(+)	partial			WP_013355852.1	hypothetical protein	61.2	48.4	52.8
MGA_980	LOCUS_09570	sequence035:68961..69833(-)	partial			WP_011987065.1	helix-turn-helix domain-containing protein	34.8	14.7	26.7
MGA_1006	LOCUS_09830	sequence036:26329..27690(-)	partial			WP_011101334.1	hypothetical protein	74.8	69.4	57.1
MGA_1012	LOCUS_09890	sequence036:34222..36192(+)	partial			WP_011101277.1	serine hydrolase domain-containing protein	49.7	83.4	51.2
MGA_1013	LOCUS_09900	sequence036:36380..38050(-)	partial			WP_002296909.1	membrane protein	63.8	62.8	25.8
MGA_1014	LOCUS_09910	sequence036:38123..39304(-)	partial			WP_011476454.1	hypothetical protein	98.0	65.7	26.4
MGA_1045	LOCUS_10190	sequence038:6096..6632(+)	frameshift		6085	WP_057811338.1	hypothetical protein	100.0	47.6	91.0
MGA_1048	LOCUS_10220	sequence038:7968..9332(-)	partial			WP_015039059.1	nucleotidyltransferase	65.4	65.8	28.4
MGA_1049	LOCUS_10230	sequence038:10342..11487(-)	partial			WP_000897132.1	ATP-dependent Clp protease ATP-binding subunit	95.5	51.8	24.4
MGA_1063	LOCUS_10340	sequence041:1192..1518(-)	partial			WP_011254572.1	Fic family protein	93.5	29.1	53.9
MGA_1086	LOCUS_10570	sequence042:21740..22873(+)	partial			WP_012256557.1	sensor histidine kinase	74.0	74.5	32.9
MGA_1095	LOCUS_10660	sequence042:32060..32884(+)	partial			WP_003646031.1	O-antigen ligase family protein	97.1	67.6	50.2
MGA_1096	LOCUS_10670	sequence042:33449..33805(-)	partial			WP_011101297.1	tyrosine-type recombinase/integrase	92.4	55.9	81.7
MGA_1104	LOCUS_10750	sequence042:40328..41122(+)	partial			WP_003020707.1	glycosyltransferase	87.1	71.2	39.6
MGA_1111	LOCUS_10820	sequence044:636..4280(+)	partial			WP_147628756.1	MucBP domain-containing protein	42.5	20.9	31.5
MGA_1149	LOCUS_11200	sequence044:41787..42224(-)	partial			WP_011102098.1	alpha/beta hydrolase	97.2	45.0	87.2
MGA_1167	LOCUS_11380	sequence044:57491..58117(+)	partial			WP_011102017.1	matrixin family metalloprotease	59.6	36.3	43.2
MGA_1188	LOCUS_11590	sequence045:709..2460(+)	partial			WP_070650885.1	DUF1906 domain-containing protein	84.7	68.1	53.7
MGA_1190	LOCUS_11610	sequence045:3872..4402(+)	partial			WP_225350953.1	DUF1906 domain-containing protein	83.5	26.0	50.3
MGA_1197	LOCUS_11680	sequence045:9013..9360(-)	partial			WP_011101911.1	nicotinate phosphoribosyltransferase	95.7	23.1	94.5
MGA_1217	LOCUS_11880	sequence046:13881..14846(-)	partial			WP_011101137.1	DNA/RNA non-specific endonuclease	54.8	54.2	67.6
MGA_1222	LOCUS_11930	sequence046:19302..20330(+)	partial			WP_003642327.1	Ig-like domain-containing protein	36.5	46.0	58.7
MGA_1241	LOCUS_12120	sequence046:42784..43521(-)	partial			WP_011102021.1	transglycosylase	37.1	69.5	81.3
MGA_1245	LOCUS_12160	sequence046:47751..48020(-)	internal_stop_codon	48054..48056(-)		WP_011102007.1	membrane protein	100.0	50.0	58.4
MGA_1246	LOCUS_12170	sequence046:48054..48296(-)	internal_stop_codon	48054..48056(-)		WP_011102007.1	membrane protein	85.0	37.9	41.2
MGA_1252	LOCUS_12230	sequence046:54527..55195(+)	frameshift		55189	WP_011254482.1	RNA-guided endonuclease TnpB family protein	88.7	51.7	58.5
MGA_1253	LOCUS_12240	sequence046:55210..55677(+)	frameshift		55189	WP_011254482.1	RNA-guided endonuclease TnpB family protein	99.4	40.0	65.6
MGA_1262	LOCUS_12330	sequence046:60813..64469(+)	partial			WP_011102000.1	alkaline phosphatase family protein	72.6	83.0	56.3
MGA_1264	LOCUS_12350	sequence046:65423..65746(+)	partial			WP_118828336.1	metalloregulator ArsR/SmtB family transcription factor	77.6	66.4	37.3
MGA_1337	LOCUS_13030	sequence051:299..622(-)	partial			WP_061777522.1	hypothetical protein	96.3	40.7	94.2
MGA_1366	LOCUS_13310	sequence053:21225..21446(+)	partial			WP_002297404.1	IS110 family transposase	100.0	17.8	52.7
MGA_1372	LOCUS_13370	sequence053:26796..27821(+)	partial			WP_003358943.1	hypothetical protein	41.9	83.6	32.7
MGA_1383	LOCUS_13480	sequence053:35350..35871(+)	partial			WP_003641529.1	YslB family protein	99.4	74.9	76.2
MGA_1487	LOCUS_14520	sequence053:147460..147594(+)	frameshift,internal_stop_codon	147706..147708(+)	147675,147564	WP_056952885.1	hypothetical protein	84.1	30.1	86.5
MGA_1508	LOCUS_14720	sequence053:162605..164791(-)	partial			WP_011101804.1	MucBP domain-containing protein	76.5	64.3	32.6
MGA_1583	LOCUS_15460	sequence053:240197..242134(-)	partial			WP_011101833.1	SpaA isopeptide-forming pilin-related protein	74.6	66.4	46.1
MGA_1600	LOCUS_15630	sequence053:260898..265058(-)	partial			WP_011100913.1	SpaA isopeptide-forming pilin-related protein	54.4	76.6	36.5
MGA_1604	LOCUS_15670	sequence053:267902..268384(-)	internal_stop_codon	268409..268411(-)		WP_011475593.1	ABC transporter ATP-binding protein	98.8	65.6	67.7
MGA_1605	LOCUS_15680	sequence053:268409..268624(-)	internal_stop_codon	268409..268411(-)		WP_011475593.1	ABC transporter ATP-binding protein	93.0	27.4	63.6
MGA_1620	LOCUS_15830	sequence053:280062..280499(+)	partial			WP_003641539.1	MerR family transcriptional regulator	77.2	73.2	42.9
MGA_1653	LOCUS_16160	sequence054:17173..17538(+)	frameshift		17478	WP_015379490.1	SIS domain-containing protein	83.5	27.9	60.8
MGA_1654	LOCUS_16170	sequence054:17484..18275(+)	frameshift		17478	WP_015379490.1	SIS domain-containing protein	97.0	69.7	74.1
MGA_1720	LOCUS_16810	sequence057:1..661(+)	partial			WP_003561810.1	IS30-like element ISLpl1 family transposase	100.0	70.9	91.3
MGA_1723	LOCUS_16840	sequence057:2224..2580(-)	partial			WP_011674176.1	PRD domain-containing protein	89.0	12.3	64.8
MGA_1764	LOCUS_17250	sequence058:22769..27586(+)	partial			WP_011101123.1	tape measure protein	66.9	75.7	27.5
MGA_1782	LOCUS_17380	sequence061:1777..1989(+)	frameshift		1768,1746,1685	WP_011102117.1	amino acid permease	75.7	11.5	75.5
MGA_1807	LOCUS_17600	sequence067:567..875(+)	partial			WP_061777522.1	hypothetical protein	100.0	40.3	95.1
MGA_1883	LOCUS_18360	sequence069:40544..41350(+)	partial			WP_011083088.1	AraC family transcriptional regulator	38.1	31.5	33.3
MGA_1937	LOCUS_18900	sequence069:100013..101359(-)	partial			WP_162303169.1	family 43 glycosylhydrolase	63.2	40.6	56.9
MGA_1945	LOCUS_18980	sequence069:110162..110356(-)	internal_stop_codon	110162..110164(-)		WP_003568016.1	DUF4312 family protein	95.3	50.0	47.5
MGA_2014	LOCUS_19630	sequence075:28707..32051(-)	partial			WP_011101838.1	Ig-like domain-containing protein	25.9	52.1	43.0
MGA_2038	LOCUS_19870	sequence075:55977..56249(+)	partial			WP_011101793.1	HNH endonuclease signature motif containing protein	100.0	69.8	87.8
MGA_2055	LOCUS_20040	sequence075:73995..74279(+)	frameshift		73990,74222	WP_143298399.1	IS5 family transposase	78.7	28.7	64.0
MGA_2056	LOCUS_20050	sequence075:74303..74647(+)	frameshift		74222	WP_143298399.1	IS5 family transposase	99.1	43.8	60.2
MGA_2063	LOCUS_20110	sequence077:2319..2903(+)	partial			WP_015706054.1	polysaccharide biosynthesis tyrosine autokinase	72.2	19.4	24.1
MGA_2064	LOCUS_20120	sequence077:2893..4005(+)	partial			WP_002289161.1	serine hydrolase domain-containing protein	65.1	63.8	21.7
MGA_2067	LOCUS_20150	sequence077:5756..6946(+)	partial			WP_002485939.1	bifunctional glycosyltransferase family 2 protein/CDP-glycerol:glycerophosphate glycerophosphotransferase	86.6	49.0	36.4
MGA_2082	LOCUS_20290	sequence079:2873..4480(+)	partial			WP_010978270.1	phage/plasmid primase, P4 family	56.4	34.3	29.4
MGA_2086	LOCUS_20330	sequence079:6022..6636(-)	partial			WP_001006993.1	NUMOD4 domain-containing protein	57.8	68.2	41.8
MGA_2087	LOCUS_20340	sequence079:6696..6998(-)	partial			WP_011674977.1	IS30 family transposase	100.0	29.6	38.0
MGA_2145	LOCUS_20890	sequence084:14..412(-)	frameshift		543	WP_088899809.1	IS5 family transposase	100.0	49.6	99.2
MGA_2146	LOCUS_20900	sequence084:475..813(-)	frameshift		543	WP_088899809.1	IS5 family transposase	83.9	35.3	97.9
MGA_2151	LOCUS_20940	sequence086:1619..2977(-)	partial			WP_011101719.1	serine hydrolase	58.6	70.5	44.5
MGA_2155	LOCUS_20960	sequence088:354..524(+)	frameshift,internal_stop_codon	533..535(+)	504,569,258,541	WP_003561810.1	IS30-like element ISLpl1 family transposase	94.6	17.2	84.9
MGA_2167	LOCUS_21060	sequence090:320..1399(-)	partial			WP_028730510.1	FRG domain-containing protein	90.3	49.2	29.3
MGA_2194	LOCUS_21310	sequence094:26426..27895(+)	partial			WP_017143542.1	serine hydrolase	42.9	56.5	33.5
MGA_2208	LOCUS_21450	sequence094:43148..43834(-)	partial			WP_011254482.1	RNA-guided endonuclease TnpB family protein	99.6	59.0	63.9
MGA_2224	LOCUS_21610	sequence094:59855..60232(-)	partial			WP_013355994.1	IS1182 family transposase	83.2	18.9	51.0
MGA_2228	LOCUS_21650	sequence094:62365..63102(-)	partial			WP_002362481.1	rhomboid family intramembrane serine protease	71.0	75.8	42.5
MGA_2231	LOCUS_21680	sequence094:67132..67995(-)	partial			WP_002294234.1	chorismate mutase	63.8	65.0	37.2
MGA_2238	LOCUS_21750	sequence094:72824..73261(+)	frameshift		73258	WP_011254327.1	amidohydrolase family protein	93.8	44.7	46.7
MGA_2239	LOCUS_21760	sequence094:73248..73763(+)	frameshift		73258	WP_011254327.1	amidohydrolase family protein	94.2	53.0	60.2
MGA_2242	LOCUS_21790	sequence094:75514..76161(+)	partial			WP_050488755.1	antibiotic biosynthesis monooxygenase	61.4	58.4	29.0
MGA_2279	LOCUS_22140	sequence096:33666..34193(-)	partial			WP_011101176.1	VanZ family protein	72.6	74.7	56.7
MGA_2281	LOCUS_22160	sequence096:36084..38087(-)	partial			WP_011101918.1	bacterial Ig-like domain-containing protein	49.8	29.3	23.8
MGA_2282	LOCUS_22170	sequence096:38175..39323(-)	partial			WP_102756879.1	BspA family leucine-rich repeat surface protein	43.7	25.9	30.5
MGA_2295	LOCUS_22280	sequence097:11726..14083(+)	partial			WP_002286037.1	alpha-L-rhamnosidase	49.0	57.2	20.0
MGA_2300	LOCUS_22330	sequence097:19387..23994(-)	partial			WP_010989592.1	bacterial Ig-like domain-containing protein	42.6	28.3	31.8
MGA_2336	LOCUS_22690	sequence097:75113..75850(+)	frameshift		75694	WP_011101922.1	LysR family transcriptional regulator	77.6	64.2	49.0
MGA_2346	LOCUS_22790	sequence097:84622..85494(-)	partial			WP_002551493.1	hydrogen peroxide-inducible genes activator	64.5	62.5	28.1
MGA_2351	LOCUS_22840	sequence097:88788..89372(+)	partial			WP_002280228.1	helix-turn-helix transcriptional regulator	95.9	65.6	46.6
MGA_2354	LOCUS_22870	sequence097:92886..93464(-)	partial			WP_012256887.1	TetR/AcrR family transcriptional regulator	71.4	65.0	28.1
MGA_2355	LOCUS_22880	sequence097:93590..95422(+)	partial			WP_011071245.1	fumarate reductase flavoprotein subunit FccA	73.0	70.5	31.3
MGA_2373	LOCUS_23050	sequence098:15266..15958(-)	frameshift		16058	WP_011476371.1	zinc ribbon domain-containing protein	91.3	76.5	25.2
MGA_2380	LOCUS_23120	sequence098:23806..24006(+)	frameshift,internal_stop_codon	23770..23772(+)	23964	WP_011102189.1	IS1182 family transposase	83.3	9.9	74.5
MGA_2453	LOCUS_23850	sequence098:88339..90135(-)	partial			WP_002296832.1	AAA family ATPase	47.7	40.2	38.1
MGA_2474	LOCUS_24060	sequence098:112695..114962(-)	partial			WP_008660848.1	helix-turn-helix domain-containing protein	13.4	34.9	34.7
MGA_2484	LOCUS_24160	sequence099:6908..7246(-)	partial			WP_010906384.1	hypothetical protein	92.0	50.6	44.4
MGA_2504	LOCUS_24360	sequence099:21924..22367(+)	partial			WP_003638551.1	response regulator transcription factor	93.9	60.5	95.7
MGA_2512	LOCUS_24440	sequence100:8487..8681(+)	internal_stop_codon	8679..8681(+)		WP_003646171.1	uracil-DNA glycosylase family protein	98.4	30.0	82.5
MGA_2513	LOCUS_24450	sequence100:8682..9065(+)	internal_stop_codon	8679..8681(+)		WP_003646171.1	uracil-DNA glycosylase family protein	100.0	60.5	78.7
MGA_2555	LOCUS_24870	sequence100:52354..52665(+)	partial			WP_011476282.1	flavocytochrome c	68.0	20.0	44.6
MGA_2659	LOCUS_25910	sequence100:163616..163852(-)	partial			WP_003643714.1	response regulator transcription factor	98.7	32.9	81.8
MGA_2742	LOCUS_26730	sequence100:247967..248287(+)	internal_stop_codon	247943..247945(+),247871..247873(+)		WP_011100976.1	hypothetical protein	100.0	70.2	70.8
MGA_2813	LOCUS_27440	sequence100:333524..337090(+)	partial			WP_011109529.1	BspA family leucine-rich repeat surface protein	32.1	35.8	36.1
MGA_2820	LOCUS_27510	sequence100:343501..348882(-)	partial			WP_011109529.1	BspA family leucine-rich repeat surface protein	34.9	66.9	42.1
MGA_2843	LOCUS_27730	sequence102:36..860(+)	partial			WP_011101957.1	ABC transporter transmembrane domain-containing protein	97.8	46.0	91.0
