{
    "type": "genome",
    "identifier": "GCF_001461825.1",
    "organism": "Bacillus velezensis",
    "title": "Bacillus velezensis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "NCAUR-ARS-USDA",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_001461825.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN04196551",
        "wgs_master": "LLZC00000000.1",
        "refseq_category": "na",
        "taxid": "492670",
        "species_taxid": "492670",
        "organism_name": "Bacillus velezensis",
        "infraspecific_name": "strain=NRRL B-41580",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2015/12/07",
        "asm_name": "ASM146182v1",
        "asm_submitter": "NCAUR-ARS-USDA",
        "gbrs_paired_asm": "GCA_001461825.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/461/825/GCF_001461825.1_ASM146182v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4034335",
        "genome_size_ungapped": "4034335",
        "gc_percent": "46.500000",
        "replicon_count": "0",
        "scaffold_count": "24",
        "contig_count": "24",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_001461825.1-RS_2024_04_06",
        "annotation_date": "2024-04-06",
        "total_gene_count": "4025",
        "protein_coding_gene_count": "3868",
        "non_coding_gene_count": "90",
        "pubmed_id": "26702995"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2015-12-07",
    "dateModified": "2015-12-07",
    "datePublished": "2015-12-07",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacillus velezensis"
        ],
        "sample_taxid": [
            "492670"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Spain: Malaga"
        ],
        "sample_host_location_id": [],
        "data_size": "1.141 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4034335",
        "Number of Sequences": "24",
        "Longest Sequences (bp)": "900716",
        "N50 (bp)": "610207",
        "Gap Ratio (%)": "0.000198",
        "GCcontent (%)": "46.3",
        "Number of CDSs": "3892",
        "Average Protein Length": "303.1",
        "Coding Ratio (%)": "87.7",
        "Number of rRNAs": "2",
        "Number of tRNAs": "80",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Bacillus velezensis",
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                "relation_to_type": "type",
                "validated": true,
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            {
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                "status": "conclusive"
            },
            {
                "organism_name": "Bacillus siamensis",
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                "species_taxid": 659243,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus amyloliquefaciens",
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                "species_taxid": 1390,
                "relation_to_type": "suspected-type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus tequilensis",
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                "accession": "GCA_900445435.1",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Bacillus spizizenii",
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                "accession": "GCA_007989785.1",
                "taxid": 96241,
                "species_taxid": 96241,
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                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
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                "organism_name": "Bacillus subtilis subsp. subtilis",
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                "species_taxid": 1423,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Bacillus atrophaeus",
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                "status": "below_threshold"
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            {
                "organism_name": "Bacillus mojavensis",
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                "taxid": 72360,
                "species_taxid": 72360,
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                "ani": 80.5075,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus vallismortis",
                "strain": "strain=DV1-F-3",
                "accession": "GCA_000245315.1",
                "taxid": 72361,
                "species_taxid": 72361,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Metabacillus flavus",
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                "accession": "GCA_018283675.1",
                "taxid": 2823519,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Neobacillus citreus",
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                "accession": "GCA_018343545.2",
                "taxid": 2833578,
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                "relation_to_type": "type",
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                "matched_fragments": 66,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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                "accession": "GCF_001461825.1",
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    "quality": 4,
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}