{ "tc_result": [ { "organism_name": "Legionella rubrilucens", "strain": "strain=WA-270A-C2", "accession": "GCA_001468125.1", "taxid": 458, "species_taxid": 458, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1034, "total_fragments": 1034, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Legionella rubrilucens", "strain": "strain=WA-270A-C2", "accession": "GCA_900640015.1", "taxid": 458, "species_taxid": 458, "relation_to_type": "type", "validated": true, "ani": 99.99, "matched_fragments": 1026, "total_fragments": 1034, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Legionella taurinensis", "strain": "strain=NCTC13314", "accession": "GCA_900452865.1", "taxid": 70611, "species_taxid": 70611, "relation_to_type": "type", "validated": true, "ani": 92.0677, "matched_fragments": 924, "total_fragments": 1034, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Legionella erythra", "strain": "strain=SE-32A-C8", "accession": "GCA_900639845.1", "taxid": 448, "species_taxid": 448, "relation_to_type": "type", "validated": true, "ani": 84.1265, "matched_fragments": 819, "total_fragments": 1034, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Legionella erythra", "strain": "strain=SE-32A-C8", "accession": "GCA_001467615.1", "taxid": 448, "species_taxid": 448, "relation_to_type": "type", "validated": true, "ani": 84.1162, "matched_fragments": 832, "total_fragments": 1034, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_001468125.1", "gtdb_species": "s__Legionella_C rubrilucens", "ani": 100.0, "matched_fragments": 1034, "total_fragments": 1034, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_900452865.1", "gtdb_species": "s__Legionella_C taurinensis", "ani": 92.0926, "matched_fragments": 922, "total_fragments": 1034, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.63", "min_intra_species_ani": "99.52", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.95", "num_clustered_genomes": 16, "status": "-" }, { "accession": "GCF_016864235.1", "gtdb_species": "s__Legionella_C sp016864235", "ani": 90.9979, "matched_fragments": 943, "total_fragments": 1034, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001467615.1", "gtdb_species": "s__Legionella_C erythra", "ani": 84.1227, "matched_fragments": 831, "total_fragments": 1034, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.95", "min_intra_species_ani": "99.95", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000621525.1", "gtdb_species": "s__Tatlockia fairfieldensis", "ani": 82.2997, "matched_fragments": 105, "total_fragments": 1034, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Tatlockia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.93", "min_intra_species_ani": "99.93", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900637635.1", "gtdb_species": "s__Tatlockia jordanis", "ani": 80.403, "matched_fragments": 99, "total_fragments": 1034, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Tatlockia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.91", "min_intra_species_ani": "99.59", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.98", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_900452385.1", "gtdb_species": "s__Tatlockia donaldsonii", "ani": 78.0014, "matched_fragments": 88, "total_fragments": 1034, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Tatlockia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900461555.1", "gtdb_species": "s__Legionella_C quinlivanii", "ani": 77.5204, "matched_fragments": 94, "total_fragments": 1034, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.97", "min_intra_species_ani": "99.95", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.98", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_000373765.1", "gtdb_species": "s__Legionella shakespearei", "ani": 77.1025, "matched_fragments": 71, "total_fragments": 1034, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.95", "min_intra_species_ani": "99.95", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.97", "num_clustered_genomes": 2, "status": "-" } ] }