{ "type": "genome", "identifier": "GCF_001486505.1", "organism": "Paenibacillus rubinfantis", "title": "Paenibacillus rubinfantis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "URMITE", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001486505.1", "bioproject": "PRJNA224116", "biosample": "SAMEA3673775", "wgs_master": "FAUQ00000000.1", "refseq_category": "reference genome", "taxid": "1720296", "species_taxid": "1720296", "organism_name": "Paenibacillus rubinfantis", "infraspecific_name": "strain=MT18", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2015/12/22", "asm_name": "Paenibacillus rubiinfantis", "asm_submitter": "URMITE", "gbrs_paired_asm": "GCA_001486505.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/486/505/GCF_001486505.1_Paenibacillus_rubiinfantis", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5370356", "genome_size_ungapped": "5369528", "gc_percent": "53.000000", "replicon_count": "0", "scaffold_count": "20", "contig_count": "25", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001486505.1-RS_2024_12_11", "annotation_date": "2024-12-11", "total_gene_count": "5020", "protein_coding_gene_count": "4849", "non_coding_gene_count": "102", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2015-12-22", "dateModified": "2015-12-22", "datePublished": "2015-12-22", "_annotation": { "sample_count": 1, "sample_organism": [ "Paenibacillus rubinfantis" ], "sample_taxid": [ "1720296" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], 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"status": "conclusive" }, { "organism_name": "Paenibacillus timonensis", "strain": "strain=DSM 16943", "accession": "GCA_022427145.1", "taxid": 225915, "species_taxid": 225915, "relation_to_type": "type", "validated": true, "ani": 87.6552, "matched_fragments": 1312, "total_fragments": 1778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paenibacillus phocaensis", "strain": "strain=mt24", "accession": "GCA_900021165.1", "taxid": 1776378, "species_taxid": 1776378, "relation_to_type": "type", "validated": true, "ani": 85.4427, "matched_fragments": 1274, "total_fragments": 1778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paenibacillus barengoltzii", "strain": "strain=NBRC 101215", "accession": "GCA_004000745.1", "taxid": 343517, "species_taxid": 343517, "relation_to_type": "type", "validated": true, "ani": 84.0863, "matched_fragments": 1189, "total_fragments": 1778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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