{ "type": "genome", "identifier": "GCF_001507545.1", "organism": "Ruegeria profundi", "title": "Ruegeria profundi", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Red Sea Research Center, Saudi Arabia", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001507545.1", "bioproject": "PRJNA224116", "biosample": "SAMN04376033", "wgs_master": "LQBP00000000.1", "refseq_category": "na", "taxid": "1685378", "species_taxid": "1685378", "organism_name": "Ruegeria profundi", "infraspecific_name": "strain=ZGT108", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/01/08", "asm_name": "ASM150754v1", "asm_submitter": "Red Sea Research Center, Saudi Arabia", "gbrs_paired_asm": "GCA_001507545.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/507/545/GCF_001507545.1_ASM150754v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4258055", "genome_size_ungapped": "4258055", "gc_percent": "56.500000", "replicon_count": "0", "scaffold_count": "33", "contig_count": "33", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001507545.1-RS_2024_03_28", "annotation_date": "2024-03-28", "total_gene_count": "4130", "protein_coding_gene_count": "4019", "non_coding_gene_count": "55", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-01-08", "dateModified": "2016-01-08", "datePublished": "2016-01-08", "_annotation": { "sample_count": 1, "sample_organism": [ "Ruegeria profundi" ], "sample_taxid": [ "1685378" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Saudi Arabia: Red Sea" ], 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"GCA_900129345.1", "taxid": 996115, "species_taxid": 996115, "relation_to_type": "type", "validated": true, "ani": 79.9923, "matched_fragments": 642, "total_fragments": 1403, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ruegeria haliotis", "strain": "strain=B1Z28", "accession": "GCA_013377785.1", "taxid": 2747601, "species_taxid": 2747601, "relation_to_type": "type", "validated": true, "ani": 79.8465, "matched_fragments": 653, "total_fragments": 1403, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ruegeria halocynthiae", "strain": "strain=DSM 27839", "accession": "GCA_900106805.1", "taxid": 985054, "species_taxid": 985054, "relation_to_type": "type", "validated": true, "ani": 79.6095, "matched_fragments": 599, "total_fragments": 1403, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phaeobacter marinintestinus", "strain": "strain=UB-M7", "accession": "GCA_007923355.1", "taxid": 1492905, "species_taxid": 1492905, 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