{ "type": "genome", "identifier": "GCF_001507595.1", "organism": "Ruegeria marisrubri", "title": "Ruegeria marisrubri", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Red Sea Research Center, Saudi Arabia", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001507595.1", "bioproject": "PRJNA224116", "biosample": "SAMN04376034", "wgs_master": "LQBQ00000000.1", "refseq_category": "reference genome", "taxid": "1685379", "species_taxid": "1685379", "organism_name": "Ruegeria marisrubri", "infraspecific_name": "strain=ZGT118", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/01/08", "asm_name": "ASM150759v1", "asm_submitter": "Red Sea Research Center, Saudi Arabia", "gbrs_paired_asm": "GCA_001507595.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/507/595/GCF_001507595.1_ASM150759v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4012034", "genome_size_ungapped": "4012034", "gc_percent": "63.000000", "replicon_count": "0", "scaffold_count": "39", "contig_count": "39", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001507595.1-RS_2024_03_28", "annotation_date": "2024-03-28", "total_gene_count": "3902", "protein_coding_gene_count": "3793", "non_coding_gene_count": "54", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-01-08", "dateModified": "2016-01-08", "datePublished": "2016-01-08", "_annotation": { "sample_count": 1, "sample_organism": [ "Ruegeria marisrubri" ], "sample_taxid": [ "1685379" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"below_threshold" }, { "organism_name": "Cribrihabitans marinus", "strain": "strain=CGMCC 1.13219", "accession": "GCA_014640375.1", "taxid": 1227549, "species_taxid": 1227549, "relation_to_type": "type", "validated": true, "ani": 81.2573, "matched_fragments": 701, "total_fragments": 1318, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cribrihabitans marinus", "strain": "strain=DSM 29340", "accession": "GCA_900109035.1", "taxid": 1227549, "species_taxid": 1227549, "relation_to_type": "type", "validated": true, "ani": 81.2234, "matched_fragments": 723, "total_fragments": 1318, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leisingera aquaemixtae", "strain": "strain=CECT 8399", "accession": "GCA_001458395.1", "taxid": 1396826, "species_taxid": 1396826, "relation_to_type": "type", "validated": true, "ani": 80.1499, "matched_fragments": 659, "total_fragments": 1318, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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28009", "accession": "GCA_900182615.1", "taxid": 686389, "species_taxid": 686389, "relation_to_type": "type", "validated": true, "ani": 79.1978, "matched_fragments": 570, "total_fragments": 1318, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovulum tesquicola", "strain": "strain=A-36s", "accession": "GCA_024128855.1", "taxid": 540254, "species_taxid": 540254, "relation_to_type": "type", "validated": true, "ani": 78.7275, "matched_fragments": 416, "total_fragments": 1318, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseibacterium elongatum", "strain": "strain=DFL-43", "accession": "GCA_000590925.1", "taxid": 159346, "species_taxid": 159346, "relation_to_type": "type", "validated": true, "ani": 78.6287, "matched_fragments": 408, "total_fragments": 1318, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alexandriicola marinus", "strain": "strain=LZ-14", "accession": "GCA_004000435.1", "taxid": 2081710, 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