{ "type": "genome", "identifier": "GCF_001514115.1", "organism": "Streptomyces olivochromogenes", "title": "Streptomyces olivochromogenes", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Bielefeld University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001514115.1", "bioproject": "PRJNA224116", "biosample": "SAMN04193347", "wgs_master": "LMWR00000000.1", "refseq_category": "reference genome", "taxid": "1963", "species_taxid": "1963", "organism_name": "Streptomyces olivochromogenes", "infraspecific_name": "strain=DSM 40451", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/01/13", "asm_name": "ASM151411v1", "asm_submitter": "Bielefeld University", "gbrs_paired_asm": "GCA_001514115.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/514/115/GCF_001514115.1_ASM151411v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "11669312", "genome_size_ungapped": "11628668", "gc_percent": "70.000000", "replicon_count": "0", "scaffold_count": "98", "contig_count": "169", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001514115.1-RS_2024_04_22", "annotation_date": "2024-04-22", "total_gene_count": "10660", "protein_coding_gene_count": "10135", "non_coding_gene_count": "81", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-01-13", "dateModified": "2016-01-13", "datePublished": "2016-01-13", "_annotation": { "sample_count": 1, "sample_organism": [ "Streptomyces olivochromogenes" ], "sample_taxid": [ "1963" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"organism_name": "Streptomyces populi", "strain": "strain=A249", "accession": "GCA_002911015.1", "taxid": 2058924, "species_taxid": 2058924, "relation_to_type": "type", "validated": true, "ani": 85.8857, "matched_fragments": 2009, "total_fragments": 3847, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces triticiradicis", "strain": "strain=NEAU-H2", "accession": "GCA_008868685.1", "taxid": 2651189, "species_taxid": 2651189, "relation_to_type": "type", "validated": true, "ani": 85.7172, "matched_fragments": 2059, "total_fragments": 3847, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces phaeochromogenes", "strain": "strain=NRRL B-1248", "accession": "GCA_001418655.1", "taxid": 1923, "species_taxid": 1923, "relation_to_type": "type", "validated": true, "ani": 85.0838, "matched_fragments": 2003, "total_fragments": 3847, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces umbrinus", "strain": "strain=JCM 4521", "accession": "GCA_014650195.1", "taxid": 67370, "species_taxid": 67370, "relation_to_type": "type", "validated": true, "ani": 84.9238, "matched_fragments": 2267, "total_fragments": 3847, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces hokutonensis", "strain": "strain=R1-NS-10", "accession": "GCA_000376565.1", "taxid": 1306990, "species_taxid": 1306990, "relation_to_type": "type", "validated": true, "ani": 84.3948, "matched_fragments": 2277, "total_fragments": 3847, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces aurantiacus", "strain": "strain=NRRL ISP-5412", "accession": "GCA_001418335.1", "taxid": 47760, "species_taxid": 47760, "relation_to_type": "type", "validated": true, "ani": 84.2937, "matched_fragments": 1721, "total_fragments": 3847, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces justiciae", "strain": "strain=3R004", "accession": 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