# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_2	LOCUS_00010	sequence001:246..1076(-)	internal_stop_codon	1077..1079(-)		WP_193485037.1	AMP-dependent synthetase/ligase	96.4	42.6	54.5
MGA_3	LOCUS_00020	sequence001:1077..2111(-)	internal_stop_codon	1077..1079(-)		WP_193485037.1	AMP-dependent synthetase/ligase	88.1	50.1	53.4
MGA_6	LOCUS_00050	sequence001:5120..5797(+)	partial			WP_013225629.1	hypothetical protein	40.9	75.2	34.4
MGA_29	LOCUS_00280	sequence001:25627..27192(-)	partial			WP_010886177.1	PE family protein	24.4	21.9	52.3
MGA_37	LOCUS_00360	sequence001:34165..36225(+)	frameshift		35712,36417,35682,35685,36423,36426,35661,35694,35664,35667,35673,36411,36414,35679	WP_010886117.1	PE family protein	19.5	10.1	61.9
MGA_40	LOCUS_00390	sequence001:38096..38767(+)	frameshift,internal_stop_codon	37833..37835(+)	38704	WP_010886165.1	PE family protein	54.3	7.9	59.5
MGA_50	LOCUS_00490	sequence001:46137..47852(-)	partial			WP_010886152.1	PE family protein	26.6	27.8	62.5
MGA_51	LOCUS_00500	sequence001:48216..49571(-)	frameshift,internal_stop_codon	48072..48074(-)	48335	WP_010886152.1	PE family protein	33.3	27.4	60.7
MGA_54	LOCUS_00530	sequence001:50840..52876(-)	frameshift,internal_stop_codon	52622..52624(-),52914..52916(-)	52865,52738,52926,52959	WP_010886165.1	PE family protein	17.4	7.7	51.7
MGA_71	LOCUS_00700	sequence001:75532..75786(-)	internal_stop_codon	75832..75834(-)		WP_003112674.1	XRE family transcriptional regulator	72.6	32.4	41.0
MGA_72	LOCUS_00710	sequence001:75832..76074(-)	internal_stop_codon	75832..75834(-)		WP_005109728.1	XRE family transcriptional regulator	95.0	43.9	56.6
MGA_79	LOCUS_00780	sequence001:82167..82415(+)	frameshift		82379	WP_003894385.1	nitroreductase family deazaflavin-dependent oxidoreductase	79.3	43.0	64.6
MGA_80	LOCUS_00790	sequence001:82408..82602(+)	frameshift		82379	WP_003894385.1	nitroreductase family deazaflavin-dependent oxidoreductase	100.0	42.4	57.8
MGA_81	LOCUS_00800	sequence001:82818..83681(+)	frameshift		82816	WP_003899381.1	aromatic acid exporter family protein	99.0	80.0	48.2
MGA_87	LOCUS_00860	sequence001:92446..93159(-)	frameshift		93319	WP_003899377.1	DUF2189 domain-containing protein	89.5	65.2	62.3
MGA_111	LOCUS_01100	sequence001:118083..118556(+)	internal_stop_codon	118554..118556(+)		WP_003407185.1	type III polyketide synthase	100.0	39.9	73.2
MGA_112	LOCUS_01110	sequence001:118584..119264(+)	internal_stop_codon	118554..118556(+)		WP_003407185.1	type III polyketide synthase	100.0	57.5	83.2
MGA_123	LOCUS_01220	sequence001:131913..132230(+)	internal_stop_codon	131856..131858(+),131751..131753(+)		WP_003898857.1	integration host factor, actinobacterial type	100.0	55.3	85.7
MGA_157	LOCUS_01560	sequence001:167864..169069(+)	partial			WP_003407378.1	esterase PE16	97.5	68.6	60.9
MGA_159	LOCUS_01570	sequence002:2194..2670(+)	frameshift		2526	WP_009935306.1	sigma-70 family RNA polymerase sigma factor SigJ	54.4	26.9	83.7
MGA_160	LOCUS_01580	sequence002:2577..3155(+)	frameshift,internal_stop_codon	3154..3156(+)	2526	WP_009935306.1	sigma-70 family RNA polymerase sigma factor SigJ	98.4	61.5	70.8
MGA_161	LOCUS_01590	sequence002:3300..4637(+)	frameshift		4391	WP_010886177.1	PE family protein	28.8	21.9	50.8
MGA_163	LOCUS_01610	sequence002:5117..5716(-)	partial			WP_003905037.1	IS110 family transposase	97.5	34.0	82.0
MGA_165	LOCUS_01630	sequence002:6475..8874(+)	frameshift,internal_stop_codon	8464..8466(+)	8466,9095,9096,9066,8475,9047,8463	WP_010886152.1	PE family protein	18.5	27.8	59.6
MGA_179	LOCUS_01770	sequence002:19766..20167(-)	frameshift		19873	WP_010886112.1	PE family protein	77.4	17.1	60.2
MGA_185	LOCUS_01830	sequence002:25239..26570(-)	frameshift		25286	WP_003898492.1	HNH endonuclease signature motif containing protein	90.7	81.3	50.7
MGA_203	LOCUS_02010	sequence002:48611..48871(+)	internal_stop_codon	48869..48871(+)		WP_003891444.1	magnesium transporter CorA family protein	93.0	24.0	57.5
MGA_204	LOCUS_02020	sequence002:48881..49606(+)	internal_stop_codon	48869..48871(+)		WP_003891444.1	magnesium transporter CorA family protein	97.9	72.8	68.7
MGA_205	LOCUS_02030	sequence002:49811..50329(+)	frameshift		50293	WP_003417215.1	RluA family pseudouridine synthase	91.3	51.5	80.9
MGA_206	LOCUS_02040	sequence002:50274..50678(+)	frameshift		50293	WP_010950868.1	RluA family pseudouridine synthase	94.8	40.7	74.0
MGA_210	LOCUS_02080	sequence002:55305..56534(+)	partial			WP_003404747.1	PPE family protein	56.5	57.7	39.2
MGA_220	LOCUS_02180	sequence002:68984..69295(+)	partial			WP_003417162.1	protein UsfY	99.0	74.5	80.4
MGA_224	LOCUS_02220	sequence002:72258..81662(+)	partial			WP_010895613.1	non-ribosomal peptide synthetase	66.0	40.5	29.4
MGA_227	LOCUS_02250	sequence002:84004..84183(-)	frameshift		84290	WP_010907892.1	sulfurtransferase	86.4	17.2	92.2
MGA_228	LOCUS_02260	sequence002:84729..84908(-)	internal_stop_codon	84729..84731(-)		WP_003417149.1	sulfurtransferase	100.0	19.9	93.2
MGA_230	LOCUS_02280	sequence002:85595..85915(-)	partial			WP_003900000.1	acyl-CoA carboxylase subunit epsilon	99.1	71.2	55.0
MGA_234	LOCUS_02320	sequence002:89069..89752(-)	frameshift,internal_stop_codon	89758..89760(-)	89776,89809	WP_003899998.1	GtrA family protein	100.0	82.0	82.7
MGA_242	LOCUS_02400	sequence002:98793..99074(-)	internal_stop_codon	99165..99167(-)		WP_003417120.1	CoA transferase	96.8	22.8	67.8
MGA_243	LOCUS_02410	sequence002:99165..99980(-)	internal_stop_codon	99165..99167(-)		WP_003417120.1	CoA transferase	100.0	68.5	81.9
MGA_245	LOCUS_02430	sequence002:100886..101647(+)	frameshift		101428	WP_014878283.1	CocE/NonD family hydrolase	67.6	31.0	52.8
MGA_246	LOCUS_02440	sequence002:101544..102596(+)	frameshift		101407	WP_003898774.1	CocE/NonD family hydrolase	96.6	59.9	54.7
MGA_273	LOCUS_02710	sequence002:130318..130548(+)	partial			WP_010886175.1	PE family protein	77.6	4.0	47.5
MGA_275	LOCUS_02720	sequence003:868..1998(-)	partial			WP_003408002.1	prolipoprotein diacylglyceryl transferase	87.2	71.4	72.5
MGA_283	LOCUS_02800	sequence003:9114..9587(+)	partial			WP_011730586.1	LpqN/LpqT family lipoprotein	93.0	24.6	59.9
MGA_284	LOCUS_02810	sequence003:9584..9931(+)	partial			WP_005110219.1	TPM domain-containing protein	88.7	15.2	39.2
MGA_287	LOCUS_02840	sequence003:15137..17179(+)	partial			WP_010918464.1	cyanophycinase	26.8	42.5	34.7
MGA_302	LOCUS_02990	sequence003:29462..29992(+)	partial			WP_003898937.1	NUDIX domain-containing protein	100.0	74.2	88.6
MGA_304	LOCUS_03010	sequence003:31735..32433(-)	partial			WP_003914321.1	DUF2567 domain-containing protein	70.3	84.5	60.1
MGA_317	LOCUS_03140	sequence003:46664..47812(+)	frameshift		46670	WP_003407788.1	malto-oligosyltrehalose trehalohydrolase	99.5	63.8	77.1
MGA_319	LOCUS_03160	sequence003:49192..49728(+)	partial			WP_003977465.1	pyridoxamine 5'-phosphate oxidase family protein	87.6	69.3	59.5
MGA_321	LOCUS_03180	sequence003:51070..51393(-)	frameshift		51424	WP_003407780.1	F420H(2)-dependent quinone reductase	99.1	71.6	84.0
MGA_333	LOCUS_03300	sequence003:65041..65574(-)	partial			WP_003407722.1	signal peptidase II	81.9	71.8	95.2
MGA_338	LOCUS_03350	sequence003:68926..69786(+)	frameshift		68941	WP_003420615.1	hypothetical protein	94.4	77.0	62.5
MGA_347	LOCUS_03440	sequence003:80339..80881(-)	frameshift		80928	WP_003407672.1	glycosyltransferase family 2 protein	87.8	66.7	66.1
MGA_348	LOCUS_03450	sequence003:80878..81174(-)	frameshift		80928	WP_003407672.1	glycosyltransferase family 2 protein	65.3	24.5	78.1
MGA_353	LOCUS_03500	sequence003:90661..91317(+)	partial			WP_001087865.1	class I SAM-dependent methyltransferase	77.1	72.5	38.1
MGA_361	LOCUS_03580	sequence003:99992..100795(+)	partial			WP_001977544.1	aldolase/citrate lyase family protein	73.0	72.3	26.8
MGA_369	LOCUS_03660	sequence004:2059..2238(+)	partial			WP_003404135.1	DUF3073 domain-containing protein	66.1	65.0	92.3
MGA_386	LOCUS_03830	sequence004:18659..18976(+)	internal_stop_codon	18974..18976(+)		WP_003404013.1	NAD(P)/FAD-dependent oxidoreductase	100.0	21.8	64.2
MGA_387	LOCUS_03840	sequence004:19067..20143(+)	internal_stop_codon	18974..18976(+)		WP_003404013.1	NAD(P)/FAD-dependent oxidoreductase	98.6	70.9	82.5
MGA_389	LOCUS_03860	sequence004:20734..21198(+)	frameshift		20690	WP_003403998.1	hypothetical protein	98.7	75.9	61.0
MGA_392	LOCUS_03890	sequence004:22467..23516(+)	partial			WP_003401347.1	PPE family protein	55.3	34.9	50.5
MGA_393	LOCUS_03900	sequence004:23543..23917(-)	frameshift		24009	WP_010886087.1	hypothetical protein	99.2	38.6	81.3
MGA_409	LOCUS_04060	sequence004:38556..39764(-)	partial			WP_003401488.1	type VII secretion system ESX-3 target PPE4	44.0	34.7	52.8
MGA_417	LOCUS_04140	sequence004:47622..49442(+)	frameshift		47605	WP_010908521.1	Rv1355c family protein	97.5	81.8	54.5
MGA_419	LOCUS_04160	sequence004:50702..52252(+)	partial			WP_011729255.1	serine/threonine-protein kinase	59.9	62.3	64.4
MGA_428	LOCUS_04250	sequence004:60093..60299(+)	internal_stop_codon	60297..60299(+)		WP_003897264.1	cytochrome P450	91.2	13.7	88.7
MGA_429	LOCUS_04260	sequence004:60327..61463(+)	internal_stop_codon	60297..60299(+)		WP_003898577.1	lanosterol 14-alpha demethylase	97.9	82.0	82.4
MGA_430	LOCUS_04270	sequence004:61463..61618(+)	partial			WP_003403890.1	ferredoxin	74.5	55.9	84.2
MGA_436	LOCUS_04330	sequence004:66126..67184(+)	internal_stop_codon	67182..67184(+)		WP_003900090.1	PPE family protein	61.1	41.3	51.2
MGA_438	LOCUS_04350	sequence004:67299..67517(+)	internal_stop_codon	67182..67184(+)		WP_003900090.1	PPE family protein	65.3	9.8	66.0
MGA_444	LOCUS_04410	sequence004:72485..74011(-)	frameshift		74073	WP_011727571.1	molybdopterin-dependent oxidoreductase	99.2	56.2	71.1
MGA_445	LOCUS_04420	sequence004:73939..75189(-)	frameshift		74073	WP_011727571.1	molybdopterin-dependent oxidoreductase	89.4	41.0	68.0
MGA_453	LOCUS_04500	sequence004:83562..85286(-)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	56.4	55.5	64.9
MGA_462	LOCUS_04590	sequence004:91856..92023(-)	frameshift		92030	WP_003418777.1	alpha/beta hydrolase	94.5	19.9	75.0
MGA_465	LOCUS_04620	sequence004:95268..95846(-)	partial			WP_003418925.1	DUF2510 domain-containing protein	99.5	73.5	56.5
MGA_466	LOCUS_04630	sequence004:96080..96463(-)	partial			WP_003418931.1	LppP/LprE family lipoprotein	89.8	51.8	76.3
MGA_485	LOCUS_04810	sequence005:13100..13762(+)	partial			WP_003415107.1	DNA-binding protein HupB	49.5	50.9	96.3
MGA_500	LOCUS_04950	sequence005:26307..26927(+)	frameshift		26151	WP_003415028.1	DAK2 domain-containing protein	100.0	42.8	77.7
MGA_513	LOCUS_05080	sequence005:39885..40292(-)	internal_stop_codon	40350..40352(-)		WP_003414924.1	permease	100.0	33.5	80.9
MGA_514	LOCUS_05090	sequence005:40350..41066(-)	internal_stop_codon	40350..40352(-)		WP_003414924.1	permease	100.0	58.6	79.0
MGA_521	LOCUS_05160	sequence005:49293..49802(+)	frameshift		49781	WP_010907552.1	chorismate pyruvate-lyase family protein	97.0	78.1	57.9
MGA_528	LOCUS_05230	sequence005:64519..65226(+)	frameshift		65199	WP_003414900.1	phthiotriol/phenolphthiotriol dimycocerosates methyltransferase	97.4	84.8	72.9
MGA_537	LOCUS_05320	sequence005:92766..>94646(-)	partial			WP_003414835.1	phthiocerol type I polyketide synthase PpsB	100.0	41.4	62.9
MGA_566	LOCUS_05610	sequence006:18686..19981(+)	frameshift		19972	WP_003898564.1	signal peptide peptidase SppA	99.3	68.7	77.8
MGA_567	LOCUS_05620	sequence006:20011..20487(+)	frameshift		19972	WP_003898564.1	signal peptide peptidase SppA	99.4	25.2	77.1
MGA_607	LOCUS_06020	sequence006:59065..59739(-)	frameshift		59773	WP_003418336.1	cutinase family protein	80.8	69.1	76.2
MGA_623	LOCUS_06180	sequence006:76824..77411(+)	frameshift		77378	WP_003418289.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	93.8	29.2	84.7
MGA_624	LOCUS_06190	sequence006:77419..78711(+)	frameshift		77390	WP_003418289.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	100.0	68.9	93.7
MGA_639	LOCUS_06340	sequence006:92753..>93597(-)	partial			WP_003419334.1	PPE family protein	75.7	36.6	49.5
MGA_653	LOCUS_06480	sequence007:12338..13687(+)	frameshift		13552,13549	WP_010886177.1	PE family protein	29.4	22.6	55.3
MGA_658	LOCUS_06530	sequence007:17299..17454(+)	frameshift		17481,17451	WP_003419633.1	hypothetical protein	76.5	61.9	82.1
MGA_703	LOCUS_06980	sequence007:62071..62433(-)	partial			WP_005088224.1	PAS and ANTAR domain-containing protein	77.5	41.2	47.3
MGA_711	LOCUS_07060	sequence007:66403..68631(+)	partial			WP_013227688.1	SpoIIE family protein phosphatase	93.3	51.8	38.7
MGA_717	LOCUS_07110	sequence007:73464..73685(+)	internal_stop_codon	73683..73685(+)		WP_011727952.1	SelB C-terminal domain-containing protein	100.0	12.3	79.5
MGA_718	LOCUS_07120	sequence007:74679..76574(-)	partial			WP_135359439.1	MFS transporter	70.8	81.0	38.7
MGA_722	LOCUS_07150	sequence007:79727..80542(+)	internal_stop_codon	79691..79693(+)		WP_013225067.1	formate dehydrogenase	98.5	24.2	76.4
MGA_726	LOCUS_07190	sequence007:82981..84123(+)	frameshift		82904	WP_003419768.1	membrane protein	87.4	74.7	65.3
MGA_733	LOCUS_07260	sequence007:90370..91074(+)	partial			WP_050039320.1	PadR family transcriptional regulator	61.5	76.6	76.4
MGA_742	LOCUS_07350	sequence008:7205..7411(-)	partial			WP_003412226.1	hypothetical protein	64.7	43.4	61.2
MGA_759	LOCUS_07520	sequence008:32126..32692(+)	partial			WP_003973221.1	GNAT family N-acetyltransferase	90.4	74.0	48.0
MGA_780	LOCUS_07730	sequence008:56590..57045(+)	frameshift		56539	WP_014878057.1	sirohydrochlorin chelatase	98.0	60.9	56.8
MGA_782	LOCUS_07750	sequence008:59092..59592(+)	frameshift		59541	WP_014001254.1	oligopeptide transporter, OPT family	90.4	22.5	84.0
MGA_783	LOCUS_07760	sequence008:59589..61094(+)	frameshift		59544	WP_014001254.1	oligopeptide transporter, OPT family	99.6	74.8	64.1
MGA_797	LOCUS_07900	sequence008:74775..76376(+)	partial			WP_003911027.1	PE family protein	22.9	27.8	59.8
MGA_798	LOCUS_07910	sequence008:76480..77907(+)	partial			WP_003911027.1	PE family protein	30.1	31.9	48.3
MGA_809	LOCUS_08020	sequence008:89449..>90240(-)	partial			WP_003412375.1	enhanced intracellular survival protein Eis	100.0	66.2	71.5
MGA_818	LOCUS_08110	sequence009:12734..13420(-)	frameshift		13367	WP_011731284.1	DNA polymerase IV	92.5	52.9	66.7
MGA_826	LOCUS_08190	sequence009:19219..19971(-)	internal_stop_codon	19219..19221(-)		WP_010950948.1	TMEM165/GDT1 family protein	90.0	75.2	63.8
MGA_829	LOCUS_08220	sequence009:22606..23394(+)	partial			WP_003899726.1	DUF4328 domain-containing protein	100.0	72.2	58.4
MGA_832	LOCUS_08250	sequence009:24980..26209(-)	partial			WP_235624060.1	LCP family protein	78.7	74.3	65.8
MGA_836	LOCUS_08290	sequence009:29096..29446(-)	frameshift		29101	WP_003899719.1	metallopeptidase family protein	99.1	83.9	84.3
MGA_864	LOCUS_08570	sequence009:63916..66219(-)	frameshift,internal_stop_codon	63916..63918(-),63915..63917(-),66145..66147(-)	64274,65171,65604,65544,64457,65421,65454	WP_010886090.1	PE family protein	17.2	15.0	56.8
MGA_865	LOCUS_08580	sequence009:66353..67831(-)	frameshift		67901	WP_003900757.1	DNA alkylation response protein	99.2	81.8	80.7
MGA_882	LOCUS_08740	sequence009:88874..89569(-)	partial			WP_003420612.1	NAD-dependent epimerase/dehydratase family protein	98.3	69.6	82.4
MGA_884	LOCUS_08760	sequence010:1570..2760(+)	frameshift,internal_stop_codon	2204..2206(+)	2595,2598,2347,2604,2610,2070,2583,2584,2589,2622	WP_010950451.1	PE family protein	31.3	14.9	59.7
MGA_887	LOCUS_08790	sequence010:3643..4701(-)	partial			WP_003401279.1	lipase maturation factor family protein	97.7	70.7	76.2
MGA_890	LOCUS_08820	sequence010:6315..8060(-)	partial			WP_010950366.1	DUF3367 domain-containing protein	99.8	41.3	67.1
MGA_891	LOCUS_08830	sequence010:8032..10482(-)	frameshift		8343	WP_003911102.1	DUF3367 domain-containing protein	85.9	49.8	79.7
MGA_912	LOCUS_09040	sequence010:31057..31374(+)	internal_stop_codon	31039..31041(+)		WP_003401336.1	nitrite reductase large subunit NirB	100.0	12.1	90.5
MGA_918	LOCUS_09100	sequence010:35685..35900(-)	frameshift		35687	WP_003401360.1	nitrate/nitrite transporter	49.3	7.5	60.0
MGA_936	LOCUS_09280	sequence010:55584..56324(+)	internal_stop_codon	56322..56324(+)		WP_003401448.1	class I SAM-dependent methyltransferase	100.0	81.8	78.9
MGA_959	LOCUS_09510	sequence010:82459..83895(+)	partial			WP_011727115.1	hypothetical protein	68.2	59.4	38.1
MGA_963	LOCUS_09550	sequence011:1..3810(+)	partial			WP_169347939.1	non-ribosomal peptide synthase/polyketide synthase	79.8	15.4	38.8
MGA_964	LOCUS_09560	sequence011:3846..7889(+)	frameshift		5864,5913,7829	WP_011104220.1	non-ribosomal peptide synthetase	97.5	21.7	33.3
MGA_965	LOCUS_09570	sequence011:7879..8712(+)	frameshift,internal_stop_codon	7762..7764(+)	7776,7829,7830	WP_003113143.1	non-ribosomal peptide synthetase	56.3	6.3	34.8
MGA_977	LOCUS_09690	sequence011:23928..24566(-)	frameshift,internal_stop_codon	24567..24569(-)	24600	WP_003400961.1	TetR/AcrR family transcriptional regulator	98.6	74.6	67.9
MGA_988	LOCUS_09800	sequence011:33395..33607(+)	partial			WP_003977449.1	TOBE domain-containing protein	92.9	45.3	47.7
MGA_994	LOCUS_09860	sequence011:38630..38800(-)	frameshift		38829	WP_013229398.1	LLM class flavin-dependent oxidoreductase	92.9	15.2	71.2
MGA_995	LOCUS_09870	sequence011:38779..39678(-)	frameshift		38829	WP_013229398.1	LLM class flavin-dependent oxidoreductase	95.3	82.4	73.3
MGA_1030	LOCUS_10220	sequence011:80002..80247(+)	internal_stop_codon	80527..80529(+),80245..80247(+)		WP_011730668.1	GntR family transcriptional regulator	91.4	30.2	83.8
MGA_1031	LOCUS_10230	sequence011:80260..80529(+)	internal_stop_codon	80527..80529(+),80245..80247(+)		WP_011730668.1	GntR family transcriptional regulator	100.0	35.1	64.0
MGA_1032	LOCUS_10240	sequence011:80542..80781(+)	internal_stop_codon	80527..80529(+)		WP_011730668.1	GntR family transcriptional regulator	87.3	28.2	58.0
MGA_1037	LOCUS_10290	sequence011:84662..85858(-)	partial			WP_010886066.1	PE family protein	31.2	25.0	63.7
MGA_1046	LOCUS_10370	sequence012:7232..7708(+)	frameshift		7705	WP_003113879.1	APC family permease	93.7	33.6	58.8
MGA_1047	LOCUS_10380	sequence012:7705..8574(+)	frameshift		7705	WP_003113879.1	APC family permease	97.6	65.0	48.6
MGA_1055	LOCUS_10460	sequence012:15087..16007(+)	frameshift		14857,15035,14894	WP_003898495.1	MinD/ParA family protein	99.3	75.1	78.0
MGA_1063	LOCUS_10540	sequence012:22428..24383(+)	partial			WP_003900169.1	hypothetical protein	64.1	74.5	56.7
MGA_1072	LOCUS_10630	sequence012:30921..31340(-)	internal_stop_codon	30921..30923(-)		WP_011030760.1	maleylpyruvate isomerase family mycothiol-dependent enzyme	97.8	61.5	47.1
MGA_1075	LOCUS_10660	sequence012:33189..33875(-)	partial			WP_010908794.1	hypothetical protein	64.9	73.9	56.0
MGA_1093	LOCUS_10840	sequence012:52585..53595(-)	internal_stop_codon	53620..53622(-)		WP_010908805.1	SulP family inorganic anion transporter	97.3	66.1	64.6
MGA_1094	LOCUS_10850	sequence012:53620..54138(-)	internal_stop_codon	53620..53622(-)		WP_003417121.1	carbonic anhydrase	91.3	20.5	60.5
MGA_1097	LOCUS_10880	sequence012:57081..58016(-)	internal_stop_codon	58050..58052(-)		WP_003402981.1	NAD(P)/FAD-dependent oxidoreductase	97.4	62.3	81.8
MGA_1098	LOCUS_10890	sequence012:58050..58541(-)	internal_stop_codon	58050..58052(-)		WP_003402981.1	NAD(P)/FAD-dependent oxidoreductase	98.2	32.9	82.5
MGA_1102	LOCUS_10930	sequence012:63798..66185(-)	partial			WP_013399334.1	ABC transporter permease	55.7	51.5	21.2
MGA_1107	LOCUS_10980	sequence012:69950..70414(-)	partial			WP_003906336.1	PPE family protein	56.5	3.6	36.8
MGA_1108	LOCUS_10990	sequence012:70356..70898(+)	partial			WP_010950590.1	PPE family protein	97.2	16.7	73.1
MGA_1113	LOCUS_11040	sequence012:75827..76090(+)	frameshift		76081	WP_000405420.1	amidase family protein	93.1	16.5	46.9
MGA_1114	LOCUS_11050	sequence012:76095..77330(+)	frameshift		76078	WP_011205766.1	amidase	98.8	76.1	47.7
MGA_1115	LOCUS_11060	sequence012:77592..77963(+)	frameshift		77927	WP_003402992.1	cytochrome P450	94.3	24.6	62.1
MGA_1116	LOCUS_11070	sequence012:77956..78921(+)	frameshift		77939	WP_003402992.1	cytochrome P450	98.8	66.9	74.8
MGA_1120	LOCUS_11110	sequence012:82442..83464(+)	partial			WP_003900174.1	TIGR03086 family metal-binding protein	95.3	74.7	72.2
MGA_1127	LOCUS_11170	sequence013:2805..3653(+)	internal_stop_codon	3651..3653(+)		WP_003412968.1	ERCC4 domain-containing protein	99.6	58.5	58.7
MGA_1130	LOCUS_11200	sequence013:6809..8683(+)	partial			WP_011729255.1	serine/threonine-protein kinase	45.5	57.8	64.7
MGA_1133	LOCUS_11230	sequence013:10059..10931(+)	partial			WP_013390253.1	DUF1524 domain-containing protein	77.9	64.5	56.8
MGA_1138	LOCUS_11280	sequence013:13135..13593(-)	partial			WP_048053779.1	type-4 uracil-DNA glycosylase	46.1	36.1	45.7
MGA_1144	LOCUS_11340	sequence013:18944..20050(+)	partial			WP_012296243.1	MobF family relaxase	46.2	15.0	31.8
MGA_1145	LOCUS_11350	sequence013:20399..22696(+)	partial			WP_028385425.1	Ti-type conjugative transfer relaxase TraA	39.6	33.7	27.0
MGA_1155	LOCUS_11450	sequence013:29123..29953(-)	frameshift		29991	WP_003405368.1	PPE family protein	41.3	28.6	36.8
MGA_1158	LOCUS_11480	sequence013:31008..34112(-)	frameshift		34122	WP_041322832.1	type VII secretion protein EccC	98.5	72.1	32.5
MGA_1159	LOCUS_11490	sequence013:34102..35220(-)	frameshift		34143	WP_005055990.1	type VII secretion protein EccC	90.1	24.9	32.4
MGA_1162	LOCUS_11520	sequence013:38285..39136(-)	frameshift		39235	WP_012296241.1	hypothetical protein	89.0	32.3	36.9
MGA_1178	LOCUS_11680	sequence013:50151..51131(-)	partial			WP_007051774.1	AAA family ATPase	71.2	69.7	30.1
MGA_1179	LOCUS_11690	sequence013:53295..53627(+)	partial			WP_003400393.1	C40 family peptidase	98.2	38.4	60.2
MGA_1184	LOCUS_11740	sequence013:56017..56565(+)	partial			WP_002115134.1	transcription termination factor NusA	81.3	29.6	39.9
MGA_1186	LOCUS_11760	sequence013:57609..59231(+)	partial			WP_010774229.1	DEAD/DEAH box helicase family protein	88.7	14.4	33.6
MGA_1187	LOCUS_11770	sequence013:59247..62981(+)	partial			WP_011861367.1	DEAD/DEAH box helicase family protein	80.5	35.2	31.0
MGA_1197	LOCUS_11870	sequence013:70841..71809(+)	frameshift		71794	WP_003410735.1	serine/threonine protein kinase PknJ	98.1	54.8	51.5
MGA_1204	LOCUS_11940	sequence013:75889..76341(-)	partial			WP_005133076.1	hypothetical protein	49.3	59.7	51.4
MGA_1207	LOCUS_11970	sequence013:77901..78845(+)	partial			WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	58.3	30.7	31.0
MGA_1211	LOCUS_12010	sequence013:80933..81862(+)	partial			WP_003904477.1	IS110-like element IS1547 family transposase	84.5	71.7	63.6
MGA_1218	LOCUS_12080	sequence014:8453..9235(-)	partial			WP_013530922.1	ribonuclease T(2)	87.7	68.4	28.8
MGA_1226	LOCUS_12160	sequence014:16272..16949(-)	internal_stop_codon	16272..16274(-)		WP_005093102.1	allophanate hydrolase	100.0	42.7	45.5
MGA_1232	LOCUS_12220	sequence014:21137..21886(+)	partial			WP_011976135.1	class I SAM-dependent methyltransferase	43.4	42.6	36.7
MGA_1235	LOCUS_12250	sequence014:24094..26727(-)	partial			WP_003914906.1	LuxR family transcriptional regulator	67.8	52.6	38.8
MGA_1242	LOCUS_12320	sequence014:32602..34269(+)	internal_stop_codon	34267..34269(+)		WP_011731328.1	glycogen debranching protein GlgX	97.8	77.6	81.7
MGA_1243	LOCUS_12330	sequence014:34318..34746(+)	internal_stop_codon	34267..34269(+)		WP_011731328.1	glycogen debranching protein GlgX	97.9	19.4	56.1
MGA_1256	LOCUS_12460	sequence014:45158..46933(+)	partial			WP_011026895.1	heavy metal translocating P-type ATPase	94.4	71.9	63.4
MGA_1264	LOCUS_12540	sequence014:53374..53649(-)	internal_stop_codon	53668..53670(-)		WP_011730501.1	DUF302 domain-containing protein	81.3	55.6	51.4
MGA_1266	LOCUS_12560	sequence014:53847..55688(-)	partial			WP_003420809.1	PE family protein	65.3	69.4	28.6
MGA_1270	LOCUS_12600	sequence014:57837..58553(-)	frameshift		58564	WP_000279894.1	pyruvate dehydrogenase complex E1 component subunit beta	97.9	72.2	46.6
MGA_1276	LOCUS_12660	sequence014:64562..65518(+)	frameshift,internal_stop_codon	65784..65786(+)	65479	WP_003410178.1	erythromycin esterase family protein	96.5	45.1	78.5
MGA_1277	LOCUS_12670	sequence014:65508..65786(+)	frameshift,internal_stop_codon	65784..65786(+)	65482	WP_003410178.1	erythromycin esterase family protein	100.0	13.5	69.6
MGA_1278	LOCUS_12680	sequence014:65787..66521(+)	internal_stop_codon	65784..65786(+)		WP_003410178.1	erythromycin esterase family protein	100.0	35.7	82.0
MGA_1301	LOCUS_12900	sequence015:7978..8772(+)	frameshift		7931	WP_003896222.1	cytochrome P450	98.9	61.4	70.1
MGA_1302	LOCUS_12910	sequence015:9005..10609(-)	partial			WP_010950544.1	PE family protein	22.8	24.8	50.8
MGA_1311	LOCUS_13000	sequence015:18092..18271(-)	frameshift		18309	WP_011730101.1	Rieske (2Fe-2S) protein	100.0	45.4	88.1
MGA_1312	LOCUS_13010	sequence015:18238..18483(-)	frameshift		18309	WP_011730101.1	Rieske (2Fe-2S) protein	64.2	40.0	96.2
MGA_1315	LOCUS_13040	sequence015:21074..21541(-)	partial			WP_003409199.1	DUF4189 domain-containing protein	59.4	63.6	51.1
MGA_1316	LOCUS_13050	sequence015:21716..22510(-)	frameshift,internal_stop_codon	22605..22607(-)	22562	WP_003899285.1	phospholipase C	100.0	56.2	60.3
MGA_1317	LOCUS_13060	sequence015:22605..23201(-)	frameshift,internal_stop_codon	22605..22607(-)	22565	WP_003900400.1	phospholipase C	94.9	36.4	73.9
MGA_1333	LOCUS_13220	sequence015:37869..38936(+)	frameshift,internal_stop_codon	39054..39056(+)	38753	WP_011730085.1	MCE family protein	76.9	56.0	66.3
MGA_1335	LOCUS_13240	sequence015:39352..40554(+)	partial			WP_011730084.1	MCE family protein	88.2	73.6	63.5
MGA_1336	LOCUS_13250	sequence015:40555..41763(+)	internal_stop_codon	41761..41763(+)		WP_011728632.1	MlaD family protein	99.8	81.2	66.4
MGA_1337	LOCUS_13260	sequence015:41767..42186(+)	internal_stop_codon	41761..41763(+)		WP_011730083.1	MlaD family protein	99.3	29.7	33.1
MGA_1340	LOCUS_13290	sequence015:43354..44088(-)	partial			WP_003407157.1	membrane protein	75.0	70.1	41.0
MGA_1341	LOCUS_13300	sequence015:44378..44656(+)	partial			WP_042510592.1	hypothetical protein	98.9	63.4	65.9
MGA_1342	LOCUS_13310	sequence015:44683..44973(-)	partial			WP_003417257.1	pilin structural subunit Mtp	66.7	60.2	60.9
MGA_1355	LOCUS_13440	sequence015:56067..56648(+)	partial			WP_003407152.1	membrane protein	74.1	65.0	62.2
MGA_1361	LOCUS_13500	sequence015:61431..61838(+)	frameshift		61435,61326	WP_003404418.1	SRPBCC family protein	96.3	82.8	80.8
MGA_1367	LOCUS_13560	sequence015:68604..68807(+)	internal_stop_codon	68805..68807(+)		WP_005113303.1	LLM class F420-dependent oxidoreductase	100.0	20.2	77.6
MGA_1368	LOCUS_13570	sequence015:68808..69551(+)	internal_stop_codon	68805..68807(+)		WP_003897127.1	LLM class F420-dependent oxidoreductase	100.0	75.5	77.1
MGA_1381	LOCUS_13690	sequence016:4618..4965(-)	partial			WP_011729161.1	carboxymuconolactone decarboxylase family protein	96.5	69.4	74.8
MGA_1384	LOCUS_13720	sequence016:6341..6517(+)	partial			WP_003895017.1	(2Fe-2S)-binding protein	79.3	66.7	67.4
MGA_1399	LOCUS_13870	sequence016:21186..21830(-)	internal_stop_codon	21957..21959(-)		WP_003900424.1	CoA transferase	93.5	24.9	67.5
MGA_1400	LOCUS_13880	sequence016:21957..22295(-)	frameshift,internal_stop_codon	21957..21959(-)	22401	WP_003900424.1	CoA transferase	100.0	13.9	83.0
MGA_1401	LOCUS_13890	sequence016:22300..23664(-)	frameshift		22401	WP_003900424.1	CoA transferase	90.7	51.7	80.0
MGA_1405	LOCUS_13930	sequence016:27795..28019(+)	internal_stop_codon	27792..27794(+),28017..28019(+)		WP_003409351.1	MOSC domain-containing protein	100.0	29.5	77.0
MGA_1406	LOCUS_13940	sequence016:28155..28469(+)	internal_stop_codon	28017..28019(+)		WP_003409351.1	MOSC domain-containing protein	97.1	40.2	73.3
MGA_1410	LOCUS_13980	sequence016:31084..32064(-)	partial			WP_003409337.1	adhesin Apa	56.7	56.9	80.0
MGA_1433	LOCUS_14210	sequence016:53733..55235(+)	internal_stop_codon	55233..55235(+)		WP_010886091.1	PE family protein	23.4	19.3	52.1
MGA_1437	LOCUS_14250	sequence016:60684..62054(+)	partial			WP_099318959.1	PE family protein	23.2	23.1	59.4
MGA_1450	LOCUS_14380	sequence017:1..842(+)	partial			WP_013225883.1	non-ribosomal peptide synthetase	88.5	7.6	30.2
MGA_1474	LOCUS_14620	sequence017:26833..29427(+)	partial			WP_011727967.1	hypothetical protein	62.6	41.9	28.7
MGA_1476	LOCUS_14640	sequence017:30023..30391(-)	partial			WP_011391058.1	transposase	62.3	49.3	45.5
MGA_1481	LOCUS_14690	sequence017:37459..38157(-)	partial			WP_010950655.1	DUF5631 domain-containing protein	99.1	31.9	64.3
MGA_1484	LOCUS_14720	sequence017:40424..40678(-)	frameshift		40728,40521,40475	WP_225580817.1	IS3 family transposase	97.6	21.2	61.0
MGA_1485	LOCUS_14730	sequence017:41355..43637(+)	partial			WP_011730306.1	EspA/EspE family type VII secretion system effector	69.2	67.0	39.4
MGA_1496	LOCUS_14840	sequence017:51370..52008(+)	frameshift		51963	WP_003410677.1	class A beta-lactamase BlaC	88.7	62.5	65.6
MGA_1497	LOCUS_14850	sequence017:51980..52306(+)	frameshift		51966	WP_003410677.1	class A beta-lactamase BlaC	93.5	32.9	70.3
MGA_1499	LOCUS_14870	sequence017:53086..54291(+)	internal_stop_codon	54289..54291(+)		WP_005114814.1	RND family transporter	97.0	41.0	73.0
MGA_1500	LOCUS_14880	sequence017:54319..56082(+)	internal_stop_codon	54289..54291(+)		WP_005114814.1	RND family transporter	89.4	55.4	77.0
MGA_1514	LOCUS_15020	sequence017:67150..68982(+)	frameshift		68847	WP_003410648.1	cobaltochelatase subunit CobN	92.8	47.7	83.7
MGA_1515	LOCUS_15030	sequence017:68904..70703(+)	frameshift		68856	WP_003410648.1	cobaltochelatase subunit CobN	99.8	50.1	90.1
MGA_1525	LOCUS_15120	sequence018:4716..5684(+)	frameshift		4708	WP_003414139.1	acyl-CoA dehydrogenase family protein	100.0	77.1	86.6
MGA_1535	LOCUS_15220	sequence018:15311..15760(+)	internal_stop_codon	15233..15235(+)		WP_003899476.1	Lrp/AsnC family transcriptional regulator	99.3	82.7	87.8
MGA_1547	LOCUS_15340	sequence018:26652..26891(+)	frameshift		26840	WP_003906903.1	PPE family protein	86.1	17.8	61.8
MGA_1548	LOCUS_15350	sequence018:26863..27771(+)	frameshift		26840	WP_003414088.1	PPE family protein	98.3	80.1	51.1
MGA_1577	LOCUS_15640	sequence018:57182..57829(-)	frameshift,internal_stop_codon	57181..57183(-)	57568,57105,57475	WP_011027474.1	(2Fe-2S)-binding protein	99.1	81.8	35.6
MGA_1583	LOCUS_15700	sequence018:63395..65194(-)	partial			WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	73.0	66.8	52.8
MGA_1585	LOCUS_15720	sequence018:66177..66557(+)	frameshift		66172	WP_010950765.1	DMT family transporter	98.4	41.5	68.8
MGA_1592	LOCUS_15790	sequence018:73208..>73737(-)	partial			WP_003413979.1	TerC/Alx family metal homeostasis membrane protein	82.9	36.5	55.2
MGA_1597	LOCUS_15830	sequence019:2544..2735(+)	frameshift		2702	WP_003416005.1	TetR/AcrR family transcriptional regulator	87.3	27.2	67.3
MGA_1600	LOCUS_15860	sequence019:3821..5227(+)	frameshift		4795	WP_011731217.1	alkyl sulfatase dimerization domain-containing protein	69.4	52.6	79.9
MGA_1601	LOCUS_15870	sequence019:5173..5691(+)	partial			WP_010950936.1	alkyl sulfatase dimerization domain-containing protein	100.0	27.3	61.6
MGA_1602	LOCUS_15880	sequence019:5708..6865(-)	internal_stop_codon	6941..6943(-)		WP_003892316.1	aldehyde dehydrogenase family protein	90.4	66.4	53.6
MGA_1603	LOCUS_15890	sequence019:6941..7273(-)	internal_stop_codon	6941..6943(-)		WP_012067427.1	NADP-dependent succinate-semialdehyde dehydrogenase	84.5	19.0	36.6
MGA_1609	LOCUS_15950	sequence019:15207..15797(+)	partial			WP_010950451.1	PE family protein	46.4	11.0	42.9
MGA_1611	LOCUS_15970	sequence019:16425..17114(-)	frameshift		17266	WP_085976166.1	IS3 family transposase	98.7	59.3	46.1
MGA_1617	LOCUS_16030	sequence019:22134..28403(+)	frameshift		24461,24477	WP_010886173.1	PE family protein	4.7	13.9	67.7
MGA_1630	LOCUS_16160	sequence019:40388..41476(+)	internal_stop_codon	41474..41476(+)		WP_005082635.1	NAD(P)/FAD-dependent oxidoreductase	98.3	75.3	71.6
MGA_1631	LOCUS_16170	sequence019:41597..41812(+)	internal_stop_codon	41474..41476(+)		WP_005082635.1	NAD(P)/FAD-dependent oxidoreductase	83.1	12.5	83.1
MGA_1658	LOCUS_16440	sequence019:69945..70433(-)	partial			WP_003418931.1	LppP/LprE family lipoprotein	88.3	62.7	42.8
MGA_1674	LOCUS_16590	sequence020:11557..11844(+)	partial			WP_003404606.1	MarR family transcriptional regulator	100.0	66.4	88.4
MGA_1676	LOCUS_16610	sequence020:12677..12964(+)	partial			WP_003404614.1	DUF2537 domain-containing protein	74.7	75.5	60.6
MGA_1682	LOCUS_16670	sequence020:19898..20527(+)	frameshift		20413	WP_003901038.1	sphingomyelinase	86.1	31.2	47.8
MGA_1683	LOCUS_16680	sequence020:20433..21449(+)	frameshift		20413	WP_003901038.1	sphingomyelinase	99.1	68.4	76.1
MGA_1698	LOCUS_16830	sequence020:35229..35459(-)	internal_stop_codon	35466..35468(-)		WP_003901259.1	sterol desaturase family protein	82.9	21.0	81.0
MGA_1699	LOCUS_16840	sequence020:35466..36170(-)	internal_stop_codon	35466..35468(-)		WP_003901259.1	sterol desaturase family protein	94.0	73.3	64.5
MGA_1703	LOCUS_16880	sequence020:38872..39816(-)	frameshift,internal_stop_codon	38872..38874(-)	39829	WP_003900661.1	MFS transporter	99.7	30.0	30.5
MGA_1710	LOCUS_16950	sequence020:49420..50064(+)	frameshift		50049,50052,50055,50058,50043,49820,50061	WP_003916655.1	PPE domain-containing protein	99.1	5.8	48.6
MGA_1711	LOCUS_16960	sequence020:50207..51997(+)	frameshift,internal_stop_codon	51995..51997(+)	50049,50061,50055	WP_003906336.1	PPE family protein	98.5	26.7	39.7
MGA_1712	LOCUS_16970	sequence020:52007..52624(+)	internal_stop_codon	51995..51997(+)		WP_211695346.1	PPE family protein	88.8	5.8	39.2
MGA_1717	LOCUS_17020	sequence020:54895..55074(+)	frameshift		55032,55029	WP_003404735.1	VOC family protein	76.3	17.5	86.7
MGA_1718	LOCUS_17030	sequence020:55074..55667(+)	frameshift		55032,55029	WP_003404735.1	VOC family protein	100.0	76.7	70.6
MGA_1725	LOCUS_17100	sequence020:61569..62372(-)	partial			WP_005110186.1	hypothetical protein	74.9	73.7	29.6
MGA_1728	LOCUS_17130	sequence020:64297..64659(-)	internal_stop_codon	64768..64770(-)		WP_003891968.1	class I SAM-dependent methyltransferase	99.2	43.3	59.7
MGA_1729	LOCUS_17140	sequence020:64768..65148(-)	internal_stop_codon	64768..64770(-)		WP_003891968.1	class I SAM-dependent methyltransferase	92.9	42.5	62.4
MGA_1731	LOCUS_17160	sequence020:66121..67434(+)	partial			WP_003401347.1	PPE family protein	48.5	36.3	45.8
MGA_1740	LOCUS_17240	sequence021:2200..3315(-)	partial			WP_168715412.1	FUSC family protein	87.6	46.1	35.7
MGA_1741	LOCUS_17250	sequence021:4505..4777(+)	frameshift		4711	WP_003898511.1	Mut7-C RNAse domain-containing protein	78.9	28.2	78.9
MGA_1742	LOCUS_17260	sequence021:4750..5292(+)	frameshift		4711	WP_003898511.1	Mut7-C RNAse domain-containing protein	96.7	69.0	72.4
MGA_1798	LOCUS_17820	sequence022:2879..3778(+)	frameshift		3664	WP_003417912.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	81.9	74.5	77.1
MGA_1829	LOCUS_18130	sequence022:42799..44514(-)	partial			WP_011140563.1	hypothetical protein	43.1	83.1	33.5
MGA_1831	LOCUS_18150	sequence022:45706..46938(-)	frameshift		46939	WP_011728442.1	NAD(P)-binding domain-containing protein	88.0	72.2	42.3
MGA_1833	LOCUS_18170	sequence022:47380..49182(-)	partial			WP_011086638.1	NAD(P)/FAD-dependent oxidoreductase	65.8	64.6	57.0
MGA_1838	LOCUS_18220	sequence022:52358..52831(-)	partial			WP_003400664.1	SRPBCC family protein	98.7	69.2	82.6
MGA_1842	LOCUS_18260	sequence022:56540..57703(-)	partial			WP_010926041.1	aromatic ring-hydroxylating dioxygenase subunit alpha	39.8	38.6	32.7
MGA_1845	LOCUS_18290	sequence022:59190..59861(+)	internal_stop_codon	59859..59861(+)		WP_003403421.1	PHB depolymerase family esterase	98.7	75.7	52.3
MGA_1848	LOCUS_18320	sequence022:61116..61259(-)	frameshift		61309	WP_003401963.1	hypothetical protein	100.0	22.5	47.9
MGA_1853	LOCUS_18370	sequence022:65093..66049(+)	frameshift		65992	WP_005094688.1	sulfotransferase	89.9	68.7	34.0
MGA_1855	LOCUS_18390	sequence023:63..425(-)	partial			WP_010950814.1	PPE family protein	94.2	26.0	57.5
MGA_1856	LOCUS_18400	sequence023:425..595(-)	partial			WP_003401485.1	type VII secretion system ESX-3 target PE5	69.6	38.2	64.1
MGA_1872	LOCUS_18560	sequence023:19050..19655(-)	partial			WP_003420421.1	lipid uptake coordinator LucA	82.1	65.0	81.2
MGA_1877	LOCUS_18610	sequence023:24377..24619(-)	partial			WP_011729752.1	lipopolysaccharide assembly protein LapA domain-containing protein	68.8	72.4	52.7
MGA_1882	LOCUS_18660	sequence023:28701..29144(+)	partial			WP_003420408.1	YbaB/EbfC family nucleoid-associated protein	65.3	72.2	77.1
MGA_1896	LOCUS_18800	sequence023:47816..50110(-)	frameshift		48175,48166,48199	WP_009938544.1	PE family protein	15.7	15.4	56.7
MGA_1899	LOCUS_18830	sequence023:50864..51211(+)	partial			WP_003419814.1	hypothetical protein	38.3	34.1	54.5
MGA_1911	LOCUS_18950	sequence023:63057..65171(-)	frameshift,internal_stop_codon	64244..64246(-),64106..64108(-),64148..64150(-),64550..64552(-),64805..64807(-)	64156,63236,63241,64045,63087,63187,63259,63260,64543	WP_010886084.1	PE family protein	17.8	19.0	46.3
MGA_1914	LOCUS_18980	sequence024:1455..1640(-)	internal_stop_codon	1455..1457(-)		WP_003092399.1	Lrp/AsnC family transcriptional regulator	95.1	38.4	51.7
MGA_1920	LOCUS_19040	sequence024:6702..8555(+)	partial			WP_010886110.1	serine/threonine protein kinase PknH	70.7	67.9	63.4
MGA_1922	LOCUS_19060	sequence024:11408..12799(+)	frameshift,internal_stop_codon	13079..13081(+)	12514	WP_010886110.1	serine/threonine protein kinase PknH	63.9	47.3	87.2
MGA_1923	LOCUS_19070	sequence024:12796..13080(+)	internal_stop_codon	13078..13080(+)		WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	98.9	15.6	72.0
MGA_1924	LOCUS_19080	sequence024:13093..13419(+)	internal_stop_codon	13078..13080(+)		WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	97.2	17.6	74.3
MGA_1928	LOCUS_19120	sequence024:17082..17615(+)	partial			WP_003407152.1	membrane protein	87.0	66.4	40.9
MGA_1929	LOCUS_19130	sequence024:17629..18696(-)	frameshift		18725	WP_003406369.1	amidase	100.0	76.8	78.0
MGA_1930	LOCUS_19140	sequence024:18633..19016(-)	frameshift		18725	WP_003406369.1	amidase	76.4	21.0	84.5
MGA_1934	LOCUS_19180	sequence024:21110..21502(-)	internal_stop_codon	21542..21544(-)		WP_003406361.1	FAD-binding protein	97.7	34.1	83.5
MGA_1935	LOCUS_19190	sequence024:21542..22246(-)	internal_stop_codon	21542..21544(-)		WP_003406361.1	FAD-binding protein	98.7	62.1	74.5
MGA_1941	LOCUS_19250	sequence024:28431..30476(+)	partial			WP_010886105.1	PE family protein	22.3	21.9	57.2
MGA_1943	LOCUS_19270	sequence024:31115..31864(+)	partial			WP_003900088.1	PPE family protein	71.9	30.2	50.3
MGA_1948	LOCUS_19320	sequence024:38889..39071(+)	internal_stop_codon	38883..38885(+)		WP_003406332.1	TM0106 family RecB-like putative nuclease	93.3	4.9	91.1
MGA_1967	LOCUS_19500	sequence024:60207..60884(+)	partial			WP_003406288.1	DUF4190 domain-containing protein	36.9	41.9	68.7
MGA_1999	LOCUS_19810	sequence025:34394..34912(-)	partial			WP_010886117.1	PE family protein	86.0	11.7	39.4
MGA_2000	LOCUS_19820	sequence025:35428..36990(+)	frameshift		36951	WP_035380749.1	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	92.3	56.2	40.5
MGA_2001	LOCUS_19830	sequence025:37420..38079(+)	frameshift		37409	WP_035380749.1	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	89.0	23.0	46.4
MGA_2003	LOCUS_19850	sequence025:38518..38877(-)	partial			WP_011123284.1	YciI family protein	84.0	45.5	42.6
MGA_2007	LOCUS_19890	sequence025:42381..42893(-)	partial			WP_010886133.1	PE family protein	62.4	21.5	53.3
MGA_2010	LOCUS_19920	sequence025:44255..45349(+)	frameshift		44085	WP_164929952.1	DMT family transporter	60.7	62.0	44.8
MGA_2011	LOCUS_19930	sequence025:45234..45878(+)	partial			WP_024502103.1	TMEM175 family protein	46.3	50.5	41.2
MGA_2018	LOCUS_20000	sequence025:52137..53570(+)	partial			WP_011144393.1	potassium channel protein	79.9	56.4	26.4
MGA_2020	LOCUS_20020	sequence025:53890..55293(-)	partial			WP_010886177.1	PE family protein	26.1	20.9	57.4
MGA_2027	LOCUS_20090	sequence026:167..649(+)	partial			WP_005110018.1	ABC transporter permease	99.4	74.0	80.5
MGA_2034	LOCUS_20160	sequence026:5602..6249(-)	partial			WP_048053779.1	type-4 uracil-DNA glycosylase	54.9	59.8	34.7
MGA_2078	LOCUS_20600	sequence026:54772..55197(+)	internal_stop_codon	55195..55197(+)		WP_010950653.1	alpha/beta hydrolase	83.7	18.0	66.1
MGA_2079	LOCUS_20610	sequence026:55201..56796(+)	internal_stop_codon	55195..55197(+)		WP_010950653.1	alpha/beta hydrolase	98.7	80.8	55.8
MGA_2080	LOCUS_20620	sequence026:56876..57364(+)	partial			WP_003410707.1	hypothetical protein	87.7	70.6	45.1
MGA_2085	LOCUS_20670	sequence027:193..594(+)	partial			WP_013228395.1	CD225/dispanin family protein	47.4	51.2	51.5
MGA_2087	LOCUS_20690	sequence027:1600..1803(-)	internal_stop_codon	1804..1806(-)		WP_003900829.1	fatty-acid--CoA ligase FadD4	98.5	12.3	78.8
MGA_2088	LOCUS_20700	sequence027:1804..3123(-)	internal_stop_codon	1804..1806(-)		WP_003900829.1	fatty-acid--CoA ligase FadD4	100.0	81.4	83.6
MGA_2102	LOCUS_20840	sequence027:21019..21510(+)	internal_stop_codon	21508..21510(+)		WP_003401172.1	zinc metalloprotease Zmp1	97.5	24.0	76.1
MGA_2103	LOCUS_20850	sequence027:21535..23013(+)	internal_stop_codon	21508..21510(+)		WP_003401172.1	zinc metalloprotease Zmp1	100.0	74.2	82.5
MGA_2104	LOCUS_20860	sequence027:23070..24236(-)	frameshift,internal_stop_codon	23069..23071(-)	24241	WP_003908489.1	molybdopterin oxidoreductase family protein	100.0	51.6	80.2
MGA_2105	LOCUS_20870	sequence027:24185..25306(-)	frameshift		24241	WP_010886070.1	molybdopterin oxidoreductase family protein	98.7	48.3	80.2
MGA_2107	LOCUS_20890	sequence027:26076..27017(-)	frameshift,internal_stop_codon	26974..26976(-)	26952,26958,27094	WP_003916225.1	L,D-transpeptidase LdtMt4	80.5	68.9	88.1
MGA_2112	LOCUS_20940	sequence027:30933..33047(+)	partial			WP_009939865.1	PE family protein	16.5	21.8	55.2
MGA_2119	LOCUS_21010	sequence027:38825..39853(+)	frameshift		39703	WP_003401110.1	sigma-70 family RNA polymerase sigma factor SigG	86.3	76.8	74.6
MGA_2120	LOCUS_21020	sequence027:39789..39971(+)	frameshift		39709	WP_003401110.1	sigma-70 family RNA polymerase sigma factor SigG	100.0	16.2	76.7
MGA_2137	LOCUS_21190	sequence028:87..404(+)	partial			WP_002681373.1	SprT family zinc-dependent metalloprotease	87.6	39.7	48.9
MGA_2140	LOCUS_21220	sequence028:3075..4337(+)	partial			WP_010974284.1	hypothetical protein	70.2	66.4	30.0
MGA_2146	LOCUS_21280	sequence028:9756..11696(+)	partial			WP_010886165.1	PE family protein	20.1	8.5	55.4
MGA_2151	LOCUS_21330	sequence028:14284..14448(-)	partial			WP_208761996.1	transposase	72.2	24.5	74.4
MGA_2167	LOCUS_21490	sequence028:31128..32183(-)	partial			WP_013225324.1	serine hydrolase	86.6	28.5	26.4
MGA_2170	LOCUS_21520	sequence028:35391..36803(+)	partial			WP_010950451.1	PE family protein	97.4	54.6	29.4
MGA_2171	LOCUS_21530	sequence028:36855..39017(-)	frameshift		39202	WP_003416064.1	serine/threonine protein kinase PknK	99.7	65.1	60.2
MGA_2172	LOCUS_21540	sequence028:39119..39784(-)	frameshift,internal_stop_codon	39794..39796(-)	39202	WP_003899905.1	serine/threonine protein kinase PknK	86.9	17.3	73.4
MGA_2173	LOCUS_21550	sequence028:39794..40177(-)	internal_stop_codon	39794..39796(-)		WP_003416064.1	serine/threonine protein kinase PknK	91.3	10.5	69.8
MGA_2179	LOCUS_21610	sequence028:47769..47996(+)	frameshift		47966	WP_011729279.1	acyltransferase	72.0	12.2	77.8
MGA_2180	LOCUS_21620	sequence028:47972..49039(+)	frameshift		47966	WP_011729279.1	acyltransferase	95.8	76.9	60.6
MGA_2194	LOCUS_21760	sequence029:7458..7994(-)	internal_stop_codon	8034..8036(-)		WP_010950916.1	DNA integrity scanning diadenylate cyclase DisA	100.0	49.7	79.8
MGA_2195	LOCUS_21770	sequence029:8034..8534(-)	internal_stop_codon	8034..8036(-)		WP_003900111.1	DNA integrity scanning diadenylate cyclase DisA	100.0	46.4	94.6
MGA_2223	LOCUS_22050	sequence029:33439..33828(+)	internal_stop_codon	33427..33429(+)		WP_005112734.1	M56 family metallopeptidase	72.1	29.0	39.8
MGA_2225	LOCUS_22070	sequence029:34707..35252(-)	partial			WP_003408271.1	protein disulfide oxidoreductase	74.6	74.2	57.8
MGA_2226	LOCUS_22080	sequence029:35783..36163(-)	internal_stop_codon	35783..35785(-)		WP_011015107.1	DsbA family protein	97.6	62.1	42.5
MGA_2235	LOCUS_22170	sequence029:45085..46698(-)	partial			WP_003916655.1	PPE domain-containing protein	97.8	16.0	41.4
MGA_2264	LOCUS_22460	sequence030:18435..18938(-)	partial			WP_013226322.1	MarR family winged helix-turn-helix transcriptional regulator	70.7	75.0	32.2
MGA_2300	LOCUS_22820	sequence030:55638..56639(-)	partial			WP_014000186.1	PPE domain-containing protein	98.2	9.3	53.2
MGA_2314	LOCUS_22960	sequence031:12215..13729(-)	partial			WP_011336871.1	class I SAM-dependent methyltransferase	29.6	70.8	45.0
MGA_2323	LOCUS_23050	sequence031:21698..22795(+)	frameshift		22549	WP_005086420.1	NtaA/DmoA family FMN-dependent monooxygenase	78.1	59.7	74.1
MGA_2324	LOCUS_23060	sequence031:22942..23859(-)	internal_stop_codon	23896..23898(-)		WP_003898435.1	RND transporter MmpL1	100.0	31.8	83.3
MGA_2325	LOCUS_23070	sequence031:23896..25761(-)	internal_stop_codon	23896..23898(-)		WP_003898435.1	RND transporter MmpL1	100.0	64.8	73.4
MGA_2326	LOCUS_23080	sequence031:26196..26513(+)	partial			WP_011391058.1	transposase	72.4	49.3	45.5
MGA_2348	LOCUS_23300	sequence031:52310..54808(-)	internal_stop_codon	54836..54838(-)		WP_003900661.1	MFS transporter	96.6	76.1	62.0
MGA_2349	LOCUS_23310	sequence031:54836..55546(-)	internal_stop_codon	54836..54838(-)		WP_003900661.1	MFS transporter	100.0	22.7	68.1
MGA_2361	LOCUS_23430	sequence032:11148..11699(+)	partial			WP_003903189.1	response regulator transcription factor	99.5	71.4	87.4
MGA_2368	LOCUS_23500	sequence032:17421..17717(-)	frameshift		17862	WP_003898600.1	LCP family protein	100.0	14.3	82.7
MGA_2369	LOCUS_23510	sequence032:17605..19638(-)	frameshift		17862	WP_003898600.1	LCP family protein	82.6	78.1	67.1
MGA_2379	LOCUS_23610	sequence032:27658..28269(-)	partial			WP_013389782.1	site-specific integrase	86.7	74.4	34.1
MGA_2387	LOCUS_23690	sequence032:32526..34319(-)	partial			WP_010950644.1	DEAD/DEAH box helicase	99.8	36.9	60.5
MGA_2391	LOCUS_23730	sequence032:38290..38820(-)	internal_stop_codon	38911..38913(-)		WP_003416786.1	IS30 family transposase	100.0	51.2	84.7
MGA_2414	LOCUS_23940	sequence033:7835..9205(+)	frameshift		9169	WP_003412642.1	multidrug efflux pump JefA	91.4	82.1	78.9
MGA_2415	LOCUS_23950	sequence033:9171..9500(+)	frameshift		9169	WP_003412642.1	multidrug efflux pump JefA	79.8	17.1	66.7
MGA_2426	LOCUS_24060	sequence033:19093..19818(-)	frameshift		19224,19233	WP_099318959.1	PE family protein	48.1	25.5	46.2
MGA_2434	LOCUS_24140	sequence033:28113..29852(-)	partial			WP_000615086.1	alpha/beta fold hydrolase	97.6	49.9	31.5
MGA_2442	LOCUS_24220	sequence033:42038..42556(-)	partial			WP_003412710.1	single-stranded DNA-binding protein	73.3	78.3	87.3
MGA_2452	LOCUS_24320	sequence034:562..2700(+)	partial			WP_010950544.1	PE family protein	17.1	24.8	63.9
MGA_2454	LOCUS_24340	sequence034:4823..5767(-)	frameshift		5853	WP_029104548.1	tetratricopeptide repeat protein	99.4	56.1	75.9
MGA_2455	LOCUS_24350	sequence034:5659..6489(-)	frameshift		5853	WP_029104548.1	tetratricopeptide repeat protein	75.0	36.9	68.1
MGA_2457	LOCUS_24370	sequence034:7536..7889(-)	partial			WP_010950574.1	DUF732 domain-containing protein	84.6	69.8	32.3
MGA_2473	LOCUS_24530	sequence034:21975..22394(-)	frameshift,internal_stop_codon	22414..22416(-)	22353	WP_003413891.1	1-deoxy-D-xylulose-5-phosphate synthase	89.2	19.6	80.0
MGA_2474	LOCUS_24540	sequence034:22414..22821(-)	frameshift,internal_stop_codon	22414..22416(-)	22353	WP_003413891.1	1-deoxy-D-xylulose-5-phosphate synthase	100.0	21.2	89.6
MGA_2475	LOCUS_24550	sequence034:23500..24423(+)	frameshift		23641,24363,24364	WP_003910308.1	PE family protein	28.0	15.3	65.1
MGA_2483	LOCUS_24630	sequence034:32887..33507(-)	internal_stop_codon	33556..33558(-)		WP_003413913.1	ABC transporter ATP-binding protein	100.0	68.4	80.6
MGA_2484	LOCUS_24640	sequence034:33556..33786(-)	internal_stop_codon	33556..33558(-)		WP_162139527.1	ABC transporter ATP-binding protein	88.2	22.7	74.6
MGA_2493	LOCUS_24730	sequence034:41578..41940(-)	partial			WP_003413930.1	dUTP diphosphatase	86.7	67.5	84.6
MGA_2500	LOCUS_24800	sequence034:45793..47322(+)	partial			WP_003413944.1	RNA polymerase sigma factor	69.9	67.6	94.7
MGA_2501	LOCUS_24810	sequence034:47532..48035(+)	internal_stop_codon	48033..48035(+)		WP_010886108.1	PE family protein	73.7	14.4	60.2
MGA_2504	LOCUS_24840	sequence034:48759..49487(+)	internal_stop_codon	48576..48578(+)		WP_013223517.1	chitinase	97.5	71.1	42.6
MGA_2515	LOCUS_24940	sequence035:273..809(-)	partial			WP_003409992.1	cellulose-binding protein	53.9	68.3	52.6
MGA_2517	LOCUS_24960	sequence035:1783..2436(+)	frameshift		1759	WP_003898609.1	M15 family metallopeptidase	90.8	77.0	77.7
MGA_2529	LOCUS_25080	sequence035:13437..14156(+)	frameshift		13414	WP_013228962.1	thiolase family protein	97.5	61.0	60.5
MGA_2532	LOCUS_25110	sequence035:15820..16977(+)	frameshift		16860,16951	WP_003404382.1	MFS transporter	88.3	78.6	54.0
MGA_2542	LOCUS_25210	sequence035:26797..27195(+)	frameshift		27117	WP_124712479.1	3-carboxyethylcatechol 2,3-dioxygenase	81.1	34.1	65.4
MGA_2543	LOCUS_25220	sequence035:27117..27737(+)	frameshift		27117	WP_124712479.1	3-carboxyethylcatechol 2,3-dioxygenase	98.5	64.6	67.0
MGA_2544	LOCUS_25230	sequence035:27734..28354(+)	frameshift		28180	WP_011730144.1	FAD-binding protein	72.8	25.6	66.0
MGA_2545	LOCUS_25240	sequence035:28329..29489(+)	frameshift		28180	WP_011730144.1	FAD-binding protein	95.9	63.0	76.8
MGA_2550	LOCUS_25290	sequence035:33481..34527(-)	internal_stop_codon	34660..34662(-)		WP_003404392.1	multicopper oxidase MmcO	99.4	59.3	69.4
MGA_2552	LOCUS_25310	sequence035:34660..35139(-)	internal_stop_codon	34660..34662(-)		WP_003404392.1	multicopper oxidase MmcO	100.0	31.3	63.5
MGA_2561	LOCUS_25400	sequence035:42323..42532(+)	internal_stop_codon	42530..42532(+)		WP_011730136.1	amidohydrolase family protein	87.0	15.6	70.5
MGA_2571	LOCUS_25500	sequence035:54100..54840(+)	partial			WP_011730097.1	acyl-CoA dehydrogenase family protein	99.6	61.6	75.5
MGA_2572	LOCUS_25510	sequence036:66..857(-)	partial			WP_003906993.1	PPE family protein	98.1	46.9	32.9
MGA_2574	LOCUS_25530	sequence036:1601..2953(-)	frameshift		2960	WP_003419334.1	PPE family protein	99.6	80.8	39.0
MGA_2579	LOCUS_25580	sequence036:7678..8724(+)	partial			WP_003418011.1	anti-sigma D factor RsdA	67.0	75.9	65.2
MGA_2607	LOCUS_25860	sequence036:42304..42807(-)	frameshift		42369,42366,42252,42246	WP_010886106.1	PE family protein	87.4	30.2	50.0
MGA_2616	LOCUS_25950	sequence036:51678..52481(+)	frameshift		52433	WP_002680038.1	glycine C-acetyltransferase	89.1	59.5	28.3
MGA_2620	LOCUS_25990	sequence037:2089..3078(-)	partial			WP_010886125.1	PE domain-containing protein	54.1	17.6	32.6
MGA_2623	LOCUS_26020	sequence037:5406..5612(-)	frameshift		5635	WP_003898528.1	hypothetical protein	100.0	27.3	55.9
MGA_2627	LOCUS_26060	sequence037:8002..9390(+)	partial			WP_004191694.1	ATP-dependent zinc metalloprotease FtsH	39.0	31.1	34.5
MGA_2630	LOCUS_26090	sequence037:13303..14649(+)	internal_stop_codon	14647..14649(+)		WP_003401912.1	LuxR family transcriptional regulator	94.9	38.9	64.8
MGA_2631	LOCUS_26100	sequence037:14668..15468(+)	internal_stop_codon	14647..14649(+),15466..15468(+)		WP_003914906.1	LuxR family transcriptional regulator	100.0	23.1	54.1
MGA_2632	LOCUS_26110	sequence037:15469..16638(+)	internal_stop_codon	15466..15468(+)		WP_010950392.1	LuxR family transcriptional regulator	99.5	35.8	45.2
MGA_2649	LOCUS_26280	sequence037:30613..30804(-)	internal_stop_codon	30865..30867(-)		WP_011731362.1	acyl-CoA dehydrogenase	96.8	8.1	65.6
MGA_2650	LOCUS_26290	sequence037:30865..32634(-)	frameshift,internal_stop_codon	32807..32809(-),30865..30867(-)	32632	WP_011731362.1	acyl-CoA dehydrogenase	100.0	78.9	50.5
MGA_2653	LOCUS_26320	sequence037:34612..35001(-)	frameshift		35042	WP_003811506.1	thiolase family protein	96.9	34.5	48.1
MGA_2654	LOCUS_26330	sequence037:34998..35822(-)	frameshift		35042	WP_005067338.1	lipid-transfer protein	94.9	62.9	32.7
MGA_2659	LOCUS_26380	sequence037:38691..39374(-)	internal_stop_codon	38691..38693(-)		WP_003403371.1	CPBP family intramembrane metalloprotease	89.0	84.9	60.9
MGA_2662	LOCUS_26410	sequence037:41895..42344(-)	internal_stop_codon	42384..42386(-)		WP_011727017.1	TetR/AcrR family transcriptional regulator	88.6	64.4	75.0
MGA_2685	LOCUS_26640	sequence038:13940..14338(-)	partial			WP_005056472.1	MerR family transcriptional regulator	50.0	71.7	65.2
MGA_2697	LOCUS_26760	sequence038:22241..23509(-)	partial			WP_011727070.1	PPE family protein	50.0	40.2	41.5
MGA_2700	LOCUS_26790	sequence038:25955..26338(-)	partial			WP_010950813.1	PPE family protein	56.7	16.2	55.6
MGA_2701	LOCUS_26800	sequence038:26368..27147(-)	partial			WP_003401488.1	type VII secretion system ESX-3 target PPE4	66.4	33.5	62.8
MGA_2704	LOCUS_26830	sequence038:28864..30756(-)	internal_stop_codon	28858..28860(-),28864..28866(-)		WP_003910446.1	PE family protein	19.0	18.8	66.7
MGA_2722	LOCUS_27010	sequence038:47686..>52497(-)	partial			WP_010886138.1	type I polyketide synthase	100.0	38.3	79.5
MGA_2723	LOCUS_27020	sequence039:485..808(+)	frameshift		431	WP_011728671.1	carbon-nitrogen hydrolase family protein	85.0	36.8	61.5
MGA_2724	LOCUS_27030	sequence039:787..1548(-)	partial			WP_033448326.1	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	45.1	45.2	41.4
MGA_2725	LOCUS_27040	sequence039:1642..2763(-)	partial			WP_011027473.1	glycogen synthase	70.2	74.4	30.1
MGA_2735	LOCUS_27140	sequence039:12035..12370(+)	partial			WP_010907580.1	zinc ribbon domain-containing protein	52.3	58.6	87.9
MGA_2746	LOCUS_27250	sequence039:25175..25645(+)	internal_stop_codon	25643..25645(+)		WP_003898667.1	acyl-CoA dehydrogenase	100.0	40.5	87.9
MGA_2747	LOCUS_27260	sequence039:25673..26338(+)	internal_stop_codon	25643..25645(+)		WP_003898667.1	acyl-CoA dehydrogenase	100.0	57.0	86.4
MGA_2758	LOCUS_27370	sequence039:39049..40365(+)	partial			WP_010886177.1	PE family protein	29.9	22.4	58.8
MGA_2764	LOCUS_27430	sequence039:46936..47937(-)	frameshift,internal_stop_codon	47832..47834(-)	48188,47798,48191	WP_010950839.1	PPE family protein	99.4	49.2	42.0
MGA_2765	LOCUS_27440	sequence039:47832..48911(-)	partial			WP_003901551.1	PPE family protein	49.6	43.5	59.6
MGA_2769	LOCUS_27480	sequence040:1312..2409(+)	internal_stop_codon	2407..2409(+)		WP_003900842.1	PecA family PE domain-processing aspartic protease	81.9	65.9	50.6
MGA_2770	LOCUS_27490	sequence040:2449..2910(+)	internal_stop_codon	2407..2409(+)		WP_003900842.1	PecA family PE domain-processing aspartic protease	100.0	31.1	75.2
MGA_2774	LOCUS_27530	sequence040:6908..7624(+)	partial			WP_010950653.1	alpha/beta hydrolase	79.4	28.8	64.0
MGA_2775	LOCUS_27540	sequence040:7707..8483(+)	partial			WP_005092955.1	hypothetical protein	92.2	33.9	37.4
MGA_2781	LOCUS_27600	sequence040:11912..12412(-)	partial			WP_003416124.1	hypothetical protein	39.2	44.1	64.6
MGA_2786	LOCUS_27650	sequence040:17614..19218(-)	partial			WP_003405897.1	HNH endonuclease signature motif containing protein	64.6	76.5	62.9
MGA_2795	LOCUS_27740	sequence040:28041..28697(+)	internal_stop_codon	28695..28697(+)		WP_003416376.1	PPE family protein	97.7	55.6	55.4
MGA_2796	LOCUS_27750	sequence040:28746..29189(+)	internal_stop_codon	28695..28697(+)		WP_003416376.1	PPE family protein	99.3	38.3	65.1
MGA_2798	LOCUS_27770	sequence040:30897..31109(-)	partial			WP_003416383.1	hypothetical protein	97.1	60.9	73.5
MGA_2808	LOCUS_27870	sequence040:40698..41780(+)	frameshift		40695	WP_013222576.1	bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase	87.5	54.9	36.2
MGA_2811	LOCUS_27900	sequence040:43674..44309(+)	partial			WP_011731552.1	amidohydrolase family protein	97.2	64.0	45.9
MGA_2814	LOCUS_27930	sequence040:46424..47605(-)	partial			WP_003901256.1	PPE family protein	97.7	57.4	56.1
MGA_2815	LOCUS_27940	sequence041:132..806(+)	partial			WP_003898463.1	crotonase/enoyl-CoA hydratase family protein	98.7	72.7	87.8
MGA_2818	LOCUS_27970	sequence041:1977..2582(-)	frameshift		2599	WP_010950409.1	RND transporter MmpL2	88.1	18.3	81.4
MGA_2819	LOCUS_27980	sequence041:2594..4882(-)	frameshift		2599	WP_003911183.1	RND transporter MmpL2	99.9	78.4	64.0
MGA_2840	LOCUS_28190	sequence041:25820..28615(+)	frameshift		27920,27122,27919	WP_003905649.1	PE family protein	11.0	17.3	57.0
MGA_2845	LOCUS_28240	sequence041:33409..34398(-)	partial			WP_005086030.1	MFS transporter	90.6	71.7	56.6
MGA_2877	LOCUS_28540	sequence042:22466..23002(-)	partial			WP_010970164.1	DNA ligase D	83.7	17.3	48.0
MGA_2888	LOCUS_28650	sequence042:35254..36039(-)	internal_stop_codon	35254..35256(-)		WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	98.9	43.3	68.7
MGA_2898	LOCUS_28750	sequence043:207..695(+)	partial			WP_013227726.1	ABC transporter permease	99.4	59.9	31.7
MGA_2900	LOCUS_28770	sequence043:1758..3542(-)	partial			WP_011729702.1	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	54.5	55.4	80.9
MGA_2903	LOCUS_28800	sequence043:7589..8302(-)	internal_stop_codon	8315..8317(-)		WP_003411442.1	adenylyl cyclase	100.0	62.7	71.7
MGA_2904	LOCUS_28810	sequence043:8315..8734(-)	internal_stop_codon	8315..8317(-)		WP_003411442.1	adenylyl cyclase	96.4	35.4	81.3
MGA_2930	LOCUS_29070	sequence043:35076..35366(+)	frameshift		35288	WP_003411371.1	hypothetical protein	74.0	27.6	70.4
MGA_2931	LOCUS_29080	sequence043:35363..35764(+)	frameshift		35288	WP_003411371.1	hypothetical protein	97.0	51.0	71.0
MGA_2940	LOCUS_29170	sequence043:44273..44824(+)	frameshift		44253	WP_010950668.1	hypothetical protein	99.5	61.7	72.0
MGA_2975	LOCUS_29500	sequence044:35428..35820(-)	frameshift		35822	WP_013227040.1	GAF and ANTAR domain-containing protein	84.6	42.9	41.2
MGA_2981	LOCUS_29560	sequence044:42228..42866(+)	frameshift		42132	WP_010950795.1	DNA-processing protein DprA	100.0	54.5	72.2
MGA_2982	LOCUS_29570	sequence044:42899..43618(+)	internal_stop_codon	43616..43618(+)		WP_003900590.1	siderophore-interacting protein	100.0	84.5	76.6
MGA_3004	LOCUS_29790	sequence045:22581..24233(-)	frameshift,internal_stop_codon	23327..23329(-)	23236,24125,23366,24070	WP_010950436.1	PE family protein	10.2	7.0	76.8
MGA_3009	LOCUS_29830	sequence045:27593..28654(+)	partial			WP_003112998.1	thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha	66.3	72.8	38.6
MGA_3021	LOCUS_29950	sequence045:39128..39760(-)	frameshift		39899	WP_003411507.1	HAD family hydrolase	100.0	72.2	73.3
MGA_3026	LOCUS_30000	sequence045:45055..45372(+)	partial			WP_010950372.1	PE family protein	83.8	10.0	53.4
MGA_3029	LOCUS_30030	sequence046:574..2457(+)	internal_stop_codon	511..513(+)		WP_010886155.1	PE family protein	8.1	8.3	60.8
MGA_3039	LOCUS_30130	sequence046:16061..18202(-)	frameshift		18422	WP_003900387.1	type I polyketide synthase	98.3	32.5	63.7
MGA_3040	LOCUS_30140	sequence046:18099..22406(-)	frameshift		18425	WP_003911579.1	type I polyketide synthase	92.5	82.8	65.3
MGA_3041	LOCUS_30150	sequence046:22427..22648(-)	internal_stop_codon	22751..22753(-)		WP_003408184.1	type I polyketide synthase	97.3	16.5	41.0
MGA_3053	LOCUS_30270	sequence046:41385..42305(-)	partial			WP_010886125.1	PE domain-containing protein	53.3	16.2	41.3
MGA_3054	LOCUS_30280	sequence046:43251..45095(-)	partial			WP_003420809.1	PE family protein	61.1	77.2	39.5
MGA_3063	LOCUS_30360	sequence047:8343..8831(+)	frameshift		8840,8789	WP_010957686.1	hydroxymethylglutaryl-CoA reductase (NADPH)	95.1	42.6	47.4
MGA_3064	LOCUS_30370	sequence047:8847..9350(+)	frameshift		8789,8846	WP_010957686.1	hydroxymethylglutaryl-CoA reductase (NADPH)	99.4	46.5	59.0
MGA_3066	LOCUS_30390	sequence047:10579..11244(+)	frameshift,internal_stop_codon	11242..11244(+)	11490	WP_003900678.1	polyprenyl synthetase family protein	99.5	63.1	49.8
MGA_3079	LOCUS_30520	sequence047:25161..26693(+)	partial			WP_010950878.1	PE family protein	29.4	23.0	57.3
MGA_3094	LOCUS_30670	sequence047:43359..43763(+)	partial			WP_011729649.1	hypothetical protein	92.5	74.6	40.5
MGA_3098	LOCUS_30690	sequence048:431..1198(-)	partial			WP_003899345.1	wax ester/triacylglycerol synthase family O-acyltransferase	55.3	28.9	42.3
MGA_3102	LOCUS_30730	sequence048:5263..7131(-)	partial			WP_010950464.1	PE family protein	20.6	21.1	62.5
MGA_3116	LOCUS_30870	sequence048:16407..16781(+)	partial			WP_003897321.1	hypothetical protein	96.8	57.6	47.9
MGA_3122	LOCUS_30930	sequence048:21951..22184(-)	internal_stop_codon	22227..22229(-)		WP_003408560.1	FAD-dependent oxidoreductase	94.8	15.9	78.1
MGA_3123	LOCUS_30940	sequence048:22227..23132(-)	internal_stop_codon	22227..22229(-)		WP_003408560.1	FAD-dependent oxidoreductase	100.0	65.4	89.4
MGA_3125	LOCUS_30960	sequence048:25779..26606(+)	frameshift		26339	WP_003408558.1	fatty-acid--CoA ligase FadD1	68.0	35.2	73.8
MGA_3126	LOCUS_30970	sequence048:26503..27372(+)	frameshift		26339	WP_003408558.1	fatty-acid--CoA ligase FadD1	100.0	54.3	81.7
MGA_3129	LOCUS_31000	sequence048:29244..29957(+)	internal_stop_codon	29955..29957(+)		WP_011085964.1	NAD(P)/FAD-dependent oxidoreductase	99.2	36.5	29.7
MGA_3130	LOCUS_31010	sequence048:29982..31151(+)	internal_stop_codon	29955..29957(+)		WP_011085964.1	NAD(P)/FAD-dependent oxidoreductase	99.5	60.7	38.6
MGA_3134	LOCUS_31050	sequence048:34057..34830(-)	partial			WP_004453954.1	class II aldolase/adducin family protein	59.1	70.4	28.1
MGA_3165	LOCUS_31360	sequence049:23087..23590(+)	frameshift		23009	WP_003400476.1	MarR family transcriptional regulator	96.4	77.4	83.9
MGA_3190	LOCUS_31610	sequence050:60..332(-)	partial			WP_005062283.1	nuclear transport factor 2 family protein	85.6	57.9	59.7
MGA_3207	LOCUS_31780	sequence050:16542..18059(-)	frameshift,internal_stop_codon	17150..17152(-)	17408,17861,17862,16906,17427,17368,17048,16732,16350,17311,16356,16357,16360,16748,18221,16751,17200,16753,16754,17458,17844,16757,16760,17530,17342,16383	WP_010886171.1	PE family protein	27.3	10.0	45.7
MGA_3239	LOCUS_32100	sequence051:9707..10360(+)	partial			WP_013225120.1	class I SAM-dependent methyltransferase	71.9	78.0	35.2
MGA_3242	LOCUS_32130	sequence051:11990..12310(+)	partial			WP_011404044.1	class I SAM-dependent methyltransferase	95.3	46.2	38.2
MGA_3246	LOCUS_32170	sequence051:15489..15761(-)	internal_stop_codon	15771..15773(-)		WP_084676709.1	serine hydrolase domain-containing protein	98.9	18.1	62.9
MGA_3247	LOCUS_32180	sequence051:15771..16865(-)	internal_stop_codon	15771..15773(-)		WP_084676709.1	serine hydrolase domain-containing protein	91.5	66.7	64.6
MGA_3248	LOCUS_32190	sequence051:17531..17947(+)	frameshift		17528	WP_013225434.1	M15 family metallopeptidase	68.1	43.5	41.0
MGA_3249	LOCUS_32200	sequence051:18152..18796(+)	frameshift,internal_stop_codon	18794..18796(+)	18769,18802,18084,18793,18763,18766	WP_010950491.1	PE family protein	38.3	9.6	58.5
MGA_3254	LOCUS_32250	sequence051:21405..22853(-)	partial			WP_010886177.1	PE family protein	31.5	26.9	39.9
MGA_3257	LOCUS_32280	sequence051:29669..30169(-)	frameshift		30222	WP_003899932.1	diacyglycerol O-acyltransferase	96.4	34.6	55.6
MGA_3258	LOCUS_32290	sequence051:30166..31059(-)	frameshift		30216	WP_011730410.1	wax ester/triacylglycerol synthase family O-acyltransferase	94.6	57.9	50.5
MGA_3282	LOCUS_32530	sequence052:17788..18720(+)	partial			WP_005112994.1	LLM class F420-dependent oxidoreductase	74.5	75.6	36.9
MGA_3290	LOCUS_32610	sequence052:25960..26337(+)	partial			WP_003900651.1	hypothetical protein	87.2	74.4	55.5
MGA_3292	LOCUS_32630	sequence052:26948..28078(-)	internal_stop_codon	26948..26950(-)		WP_010946887.1	FAD-dependent oxidoreductase	92.0	72.1	28.9
MGA_3296	LOCUS_32670	sequence052:31975..33393(-)	frameshift		32073,32076	WP_010886133.1	PE family protein	25.0	23.7	43.2
MGA_3304	LOCUS_32750	sequence052:39894..40736(+)	frameshift		40535	WP_003416584.1	DUF58 domain-containing protein	72.5	47.0	66.5
MGA_3305	LOCUS_32760	sequence052:40630..41202(+)	frameshift		40535	WP_003416584.1	DUF58 domain-containing protein	93.2	41.8	83.1
MGA_3307	LOCUS_32780	sequence052:41874..42998(+)	partial			WP_010950840.1	PPE family protein	54.5	34.3	62.8
MGA_3308	LOCUS_32790	sequence053:671..913(+)	internal_stop_codon	911..913(+)		WP_003401347.1	PPE family protein	100.0	14.4	65.0
MGA_3309	LOCUS_32800	sequence053:935..1555(+)	frameshift,internal_stop_codon	911..913(+)	1324	WP_003401347.1	PPE family protein	61.2	21.6	50.0
MGA_3310	LOCUS_32810	sequence053:1462..2379(+)	frameshift		1324	WP_003401347.1	PPE family protein	98.7	52.7	41.0
MGA_3313	LOCUS_32840	sequence053:3822..5786(-)	partial			WP_011730586.1	LpqN/LpqT family lipoprotein	52.3	56.5	55.7
MGA_3321	LOCUS_32920	sequence053:15017..16678(-)	partial			WP_003899118.1	PecA family PE domain-processing aspartic protease	55.5	55.0	64.6
MGA_3328	LOCUS_32990	sequence053:22788..23888(+)	partial			WP_066877136.1	FAD-binding oxidoreductase	20.8	17.1	40.8
MGA_3345	LOCUS_33160	sequence053:40143..40487(-)	partial			WP_012257279.1	LLM class F420-dependent oxidoreductase	92.1	42.8	44.0
MGA_3357	LOCUS_33280	sequence054:10172..11269(-)	internal_stop_codon	11270..11272(-)		WP_005110113.1	ABC transporter ATP-binding protein	83.8	48.3	67.6
MGA_3358	LOCUS_33290	sequence054:11270..12253(-)	internal_stop_codon	11270..11272(-)		WP_003406569.1	fatty acid ABC transporter ATP-binding protein/permease	88.1	45.6	54.2
MGA_3372	LOCUS_33420	sequence054:29050..30492(-)	frameshift		30515	WP_003415946.1	cytochrome c oxidase subunit I	97.7	81.8	87.2
MGA_3373	LOCUS_33430	sequence054:30435..30782(-)	frameshift		30515	WP_005056670.1	cytochrome c oxidase subunit I	76.5	15.6	79.5
MGA_3377	LOCUS_33470	sequence054:34983..35411(-)	partial			WP_005084922.1	heme-binding protein	57.7	74.5	56.1
MGA_3379	LOCUS_33490	sequence054:37916..38563(+)	internal_stop_codon	37889..37891(+)		WP_004521465.1	sulfotransferase	94.0	72.2	36.2
MGA_3383	LOCUS_33520	sequence055:2230..4143(-)	frameshift		2241	WP_010950464.1	PE family protein	18.5	19.4	53.4
MGA_3399	LOCUS_33680	sequence055:20435..21436(+)	internal_stop_codon	21434..21436(+)		WP_011028853.1	inositol-3-phosphate synthase	95.8	81.4	48.6
MGA_3400	LOCUS_33690	sequence055:21464..21661(+)	internal_stop_codon	21434..21436(+)		WP_011028853.1	inositol-3-phosphate synthase	92.3	15.5	56.7
MGA_3410	LOCUS_33790	sequence055:33301..35070(-)	partial			WP_003400794.1	non-ribosomal peptide synthetase Nrp	56.0	13.3	65.9
MGA_3411	LOCUS_33800	sequence055:34991..37036(-)	partial			WP_163682492.1	non-ribosomal peptide synthetase	78.1	9.6	47.3
MGA_3414	LOCUS_33830	sequence056:62..1564(-)	frameshift,internal_stop_codon	1580..1582(-)	1589	WP_003906700.1	PPE family protein	98.8	50.4	54.3
MGA_3415	LOCUS_33840	sequence056:1467..1850(-)	frameshift		1571,1572,1508,1419,1917	WP_010950632.1	PPE family protein	73.2	4.9	57.0
MGA_3417	LOCUS_33860	sequence056:2864..3865(+)	frameshift		3694	WP_003901256.1	PPE family protein	82.9	42.1	59.8
MGA_3418	LOCUS_33870	sequence056:3756..4850(+)	frameshift		3700	WP_010950605.1	PPE family protein	98.9	54.4	72.8
MGA_3456	LOCUS_34250	sequence057:4637..5815(+)	frameshift		5515	WP_010886183.1	type VII secretion system ESX-1 associated protein EspK	64.8	34.3	47.2
MGA_3457	LOCUS_34260	sequence057:5745..6731(+)	partial			WP_010950952.1	type VII secretion system ESX-1 associated protein EspK	96.6	35.9	49.8
MGA_3493	LOCUS_34620	sequence058:6527..7279(-)	frameshift		7250	WP_005092523.1	3-hydroxyacyl-CoA dehydrogenase family protein	92.8	79.6	45.8
MGA_3505	LOCUS_34740	sequence058:19878..20213(+)	partial			WP_003416932.1	Rv3235 family protein	100.0	52.6	67.9
MGA_3522	LOCUS_34910	sequence059:2935..4335(+)	partial			WP_003978280.1	MFS transporter	74.0	76.7	48.9
MGA_3523	LOCUS_34920	sequence059:4357..4773(+)	partial			WP_012640167.1	DUF1330 domain-containing protein	88.4	74.2	34.4
MGA_3527	LOCUS_34960	sequence059:7140..8714(+)	partial			WP_011727115.1	hypothetical protein	60.5	61.2	40.7
MGA_3528	LOCUS_34970	sequence059:8870..10396(+)	partial			WP_011727115.1	hypothetical protein	64.8	59.4	43.8
MGA_3533	LOCUS_35020	sequence059:13967..15400(-)	partial			WP_010886133.1	PE family protein	24.3	23.7	51.7
MGA_3534	LOCUS_35030	sequence059:15582..16745(-)	partial			WP_010886128.1	PE family protein	33.1	14.0	51.6
MGA_3535	LOCUS_35040	sequence059:17138..18421(+)	frameshift		18298,18295	WP_010886116.1	PE family protein	28.6	24.8	50.8
MGA_3542	LOCUS_35110	sequence059:28067..29254(+)	frameshift		29200,29233,29203,29164	WP_003901837.1	isoniazid-induced protein IniB	54.9	35.3	44.3
MGA_3546	LOCUS_35150	sequence059:30484..31038(+)	frameshift		30536,30530,30533,30566	WP_003901837.1	isoniazid-induced protein IniB	45.1	17.7	44.7
MGA_3560	LOCUS_35280	sequence060:12423..14684(-)	partial			WP_013228023.1	non-ribosomal peptide synthetase	85.3	35.3	38.0
MGA_3568	LOCUS_35360	sequence060:22972..23754(+)	frameshift		23517	WP_003894102.1	NifU family protein	61.2	48.9	59.7
MGA_3569	LOCUS_35370	sequence060:23648..23950(+)	frameshift		23517	WP_003894102.1	NifU family protein	97.0	30.0	49.5
MGA_3587	LOCUS_35550	sequence061:2342..3553(-)	frameshift,internal_stop_codon	3603..3605(-)	3280,3241,3581	WP_003406066.1	hypothetical protein	35.2	38.3	85.2
MGA_3596	LOCUS_35640	sequence061:13347..14477(+)	partial			WP_010886133.1	PE family protein	56.1	34.7	34.7
MGA_3599	LOCUS_35670	sequence061:16408..16767(+)	internal_stop_codon	16324..16326(+)		WP_003406163.1	hypothetical protein	99.2	80.8	72.9
MGA_3604	LOCUS_35720	sequence061:24307..25917(-)	frameshift		25988	WP_003911416.1	NADPH-dependent 2,4-dienoyl-CoA reductase	100.0	79.5	82.1
MGA_3605	LOCUS_35730	sequence061:25929..26330(-)	frameshift		25988	WP_003911416.1	NADPH-dependent 2,4-dienoyl-CoA reductase	93.2	18.5	82.4
MGA_3611	LOCUS_35790	sequence061:33321..35294(-)	partial			WP_010886177.1	PE family protein	18.6	20.9	56.6
MGA_3628	LOCUS_35950	sequence062:14828..15199(+)	partial			WP_003406243.1	DivIVA domain-containing protein	65.0	65.6	80.0
MGA_3631	LOCUS_35980	sequence062:16128..16976(-)	frameshift		17032	WP_003406248.1	glycogen synthase	99.6	72.6	79.0
MGA_3632	LOCUS_35990	sequence062:16973..17290(-)	frameshift		17032	WP_003406248.1	glycogen synthase	88.6	24.0	72.0
MGA_3634	LOCUS_36010	sequence062:18806..20458(-)	partial			WP_010886177.1	PE family protein	22.2	20.9	53.3
MGA_3641	LOCUS_36080	sequence062:26928..28460(+)	frameshift		28337,28301	WP_003900088.1	PPE family protein	92.2	84.7	38.5
MGA_3642	LOCUS_36090	sequence062:28376..28651(+)	frameshift		28337,28307,28340,28325,28331,28334	WP_003906336.1	PPE family protein	95.6	3.8	40.2
MGA_3645	LOCUS_36120	sequence062:30524..30928(+)	partial			WP_003406258.1	anti-sigma E factor RseA	84.3	73.4	84.1
MGA_3653	LOCUS_36190	sequence063:3869..4297(+)	partial			WP_005110336.1	site-specific integrase	81.7	29.8	68.1
MGA_3654	LOCUS_36200	sequence063:4310..4522(+)	partial			WP_005110336.1	site-specific integrase	100.0	18.0	74.3
MGA_3658	LOCUS_36240	sequence063:8345..9853(+)	frameshift		9571	WP_048061075.1	cation-transporting P-type ATPase	79.3	45.8	38.8
MGA_3659	LOCUS_36250	sequence063:9862..11124(+)	partial			WP_013227286.1	cation-transporting P-type ATPase	79.5	38.2	45.9
MGA_3660	LOCUS_36260	sequence063:11414..12196(-)	partial			WP_066567687.1	hypothetical protein	53.1	63.8	33.1
MGA_3675	LOCUS_36410	sequence063:27812..30325(+)	partial			WP_003408545.1	ATP transporter ATP-binding protein/permease	63.6	61.8	45.8
MGA_3693	LOCUS_36580	sequence064:15010..15531(-)	internal_stop_codon	15544..15546(-)		WP_011728227.1	class I adenylate-forming enzyme family protein	98.3	33.6	60.0
MGA_3694	LOCUS_36590	sequence064:15544..15909(-)	frameshift,internal_stop_codon	15543..15545(-)	15926	WP_011728227.1	class I adenylate-forming enzyme family protein	100.0	23.8	72.7
MGA_3695	LOCUS_36600	sequence064:15837..16535(-)	frameshift,internal_stop_codon	15543..15545(-)	15929	WP_011728227.1	class I adenylate-forming enzyme family protein	85.8	38.2	48.7
MGA_3710	LOCUS_36750	sequence064:32609..32866(+)	frameshift		32570	WP_011728239.1	acyl-CoA dehydrogenase family protein	94.1	22.9	75.0
MGA_3714	LOCUS_36790	sequence065:1522..1926(+)	frameshift,internal_stop_codon	1880..1882(+)	1852,1519	WP_003411694.1	inorganic phosphate transporter	82.1	19.9	85.5
MGA_3715	LOCUS_36800	sequence065:1899..2591(+)	frameshift,internal_stop_codon	2590..2592(+),1879..1881(+)	1851	WP_003411694.1	inorganic phosphate transporter	100.0	41.7	83.5
MGA_3716	LOCUS_36810	sequence065:2592..3140(+)	internal_stop_codon	2589..2591(+)		WP_003411694.1	inorganic phosphate transporter	100.0	33.0	92.3
MGA_3718	LOCUS_36830	sequence065:5257..5481(+)	frameshift		5466	WP_003412303.1	phosphoadenylyl-sulfate reductase	89.2	28.7	71.2
MGA_3719	LOCUS_36840	sequence065:5472..5990(+)	frameshift		5472	WP_003412303.1	phosphoadenylyl-sulfate reductase	100.0	67.7	81.4
MGA_3725	LOCUS_36900	sequence065:10371..11732(-)	partial			WP_010886177.1	PE family protein	27.8	21.7	59.1
MGA_3732	LOCUS_36970	sequence065:19366..19959(+)	frameshift,internal_stop_codon	20158..20160(+)	20004,19845	WP_003411704.1	wax ester/triacylglycerol synthase family O-acyltransferase	80.2	35.5	88.6
MGA_3733	LOCUS_36980	sequence065:20198..20698(+)	frameshift,internal_stop_codon	20157..20159(+)	20003	WP_003411704.1	wax ester/triacylglycerol synthase family O-acyltransferase	97.0	36.2	91.9
MGA_3738	LOCUS_37030	sequence065:23656..24804(+)	partial			WP_013227909.1	DUF5685 family protein	85.6	68.8	52.1
MGA_3750	LOCUS_37150	sequence066:2115..3629(+)	partial			WP_010886177.1	PE family protein	24.2	20.9	55.7
MGA_3754	LOCUS_37190	sequence066:7615..8526(+)	frameshift		7601	WP_003402684.1	HAD-IB family hydrolase	93.1	76.7	85.7
MGA_3796	LOCUS_37600	sequence067:19243..21042(-)	internal_stop_codon	19243..19245(-)		WP_010886133.1	PE family protein	21.5	25.9	62.0
MGA_3797	LOCUS_37610	sequence067:21760..22092(+)	partial			WP_003406566.1	DUF732 domain-containing protein	71.8	69.9	72.2
MGA_3804	LOCUS_37680	sequence067:26775..28565(+)	partial			WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	69.6	66.1	77.6
MGA_3815	LOCUS_37770	sequence068:6161..6415(-)	partial			WP_003899522.1	DUF2631 domain-containing protein	81.0	69.2	75.0
MGA_3816	LOCUS_37780	sequence068:6580..7191(-)	partial			WP_003414630.1	cell surface glycolipoprotein Mpt83	79.3	73.2	70.2
MGA_3826	LOCUS_37880	sequence068:18111..18866(+)	partial			WP_003900586.1	gamma-glutamyl-gamma-aminobutyrate hydrolase	91.6	74.7	75.7
MGA_3827	LOCUS_37890	sequence068:18935..19903(-)	partial			WP_003899026.1	PPE family protein	66.5	51.5	33.5
MGA_3830	LOCUS_37920	sequence068:24824..26752(-)	frameshift		26240,26913,26466,26563,26919,26922,26160,26358,26239	WP_010950436.1	PE family protein	11.2	9.0	66.7
MGA_3831	LOCUS_37930	sequence068:26704..27321(-)	frameshift		26922	WP_010886133.1	PE family protein	62.9	25.7	46.5
MGA_3832	LOCUS_37940	sequence068:28054..29565(-)	frameshift,internal_stop_codon	29082..29084(-),29010..29012(-)	29600,28100,28101,29540,29479,29618,28148,28985,29597	WP_010950436.1	PE family protein	10.7	6.8	64.8
MGA_3833	LOCUS_37950	sequence068:30470..32392(-)	partial			WP_010967506.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	35.2	52.0	34.6
MGA_3845	LOCUS_38070	sequence069:12134..12715(-)	internal_stop_codon	12815..12817(-)		WP_003405165.1	DUF5642 family protein	99.0	75.8	72.3
MGA_3853	LOCUS_38150	sequence069:19007..19810(+)	partial			WP_012257358.1	WecB/TagA/CpsF family glycosyltransferase	62.2	32.9	39.2
MGA_3856	LOCUS_38180	sequence069:22880..24871(+)	partial			WP_005094336.1	glycosyltransferase family 2 protein	29.3	66.6	32.2
MGA_3858	LOCUS_38200	sequence069:25938..26888(-)	partial			WP_082769289.1	class I SAM-dependent methyltransferase	78.2	74.6	52.2
MGA_3865	LOCUS_38270	sequence070:102..809(+)	partial			WP_003420529.1	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	97.4	61.7	74.6
MGA_3880	LOCUS_38420	sequence070:10470..10955(-)	partial			WP_003408004.1	TM2 domain-containing protein	68.9	69.9	47.4
MGA_3882	LOCUS_38440	sequence070:12825..13514(+)	frameshift		12681,12811,12735	WP_041272198.1	alkyl/aryl-sulfatase	90.0	48.5	33.6
MGA_3894	LOCUS_38560	sequence070:26357..27322(+)	internal_stop_codon	27320..27322(+)		WP_010950934.1	wax ester/triacylglycerol synthase family O-acyltransferase	99.1	70.8	78.0
MGA_3895	LOCUS_38570	sequence070:27341..27715(+)	internal_stop_codon	27320..27322(+)		WP_003900746.1	wax ester/triacylglycerol synthase family O-acyltransferase	100.0	27.7	73.4
MGA_3909	LOCUS_38700	sequence071:10457..11668(+)	partial			WP_003899026.1	PPE family protein	81.4	73.8	39.9
MGA_3910	LOCUS_38710	sequence071:11679..12731(+)	frameshift		12638	WP_003405368.1	PPE family protein	89.4	82.9	41.4
MGA_3913	LOCUS_38740	sequence071:16199..17284(+)	frameshift		16169	WP_003901258.1	PPE family protein	99.2	84.1	45.3
MGA_3917	LOCUS_38780	sequence071:20335..20784(-)	internal_stop_codon	20794..20796(-)		WP_003916895.1	NAD(P)/FAD-dependent oxidoreductase	85.9	32.0	80.5
MGA_3918	LOCUS_38790	sequence071:20794..21534(-)	internal_stop_codon	20794..20796(-)		WP_003409193.1	NAD(P)/FAD-dependent oxidoreductase	100.0	61.8	66.4
MGA_3919	LOCUS_38800	sequence071:21531..22061(-)	partial			WP_013531164.1	alpha/beta hydrolase	94.9	64.8	29.8
MGA_3924	LOCUS_38850	sequence071:26288..28597(-)	partial			WP_010950464.1	PE family protein	21.6	26.6	42.2
MGA_3927	LOCUS_38880	sequence072:1171..1881(+)	frameshift		1764	WP_003405324.1	HAMP domain-containing sensor histidine kinase	70.3	32.6	69.3
MGA_3928	LOCUS_38890	sequence072:1785..2669(+)	frameshift		1767	WP_003405324.1	HAMP domain-containing sensor histidine kinase	96.6	55.8	79.2
MGA_3930	LOCUS_38910	sequence072:3534..3827(-)	partial			WP_005110193.1	hypothetical protein	78.4	74.0	55.8
MGA_3955	LOCUS_39160	sequence073:32..367(-)	partial			WP_011730278.1	MFS transporter	65.8	12.9	67.1
MGA_3962	LOCUS_39230	sequence073:8210..9541(-)	frameshift		9599	WP_011729162.1	MDR family MFS transporter	92.3	59.3	63.2
MGA_3963	LOCUS_39240	sequence073:9465..9896(-)	frameshift		9599	WP_011729162.1	MDR family MFS transporter	53.8	11.2	75.3
MGA_3967	LOCUS_39280	sequence073:12833..13279(+)	partial			WP_005064825.1	MaoC family dehydratase	61.5	70.0	40.7
MGA_3973	LOCUS_39340	sequence073:27165..28823(-)	frameshift,internal_stop_codon	27164..27166(-)	28738,27154	WP_011728918.1	DUF2339 domain-containing protein	93.1	84.2	43.4
MGA_3984	LOCUS_39450	sequence074:10669..12042(+)	frameshift,internal_stop_codon	12041..12043(+),11234..11236(+),12040..12042(+)	12208,10486,11049,11146,11323,12138,10783	WP_011861926.1	collagen-like exosporium glycoprotein BclA3	71.3	48.9	28.5
MGA_4006	LOCUS_39670	sequence075:4339..4911(-)	internal_stop_codon	4966..4968(-)		WP_003898648.1	poly-gamma-glutamate hydrolase family protein	100.0	53.7	82.1
MGA_4007	LOCUS_39680	sequence075:4966..5400(-)	internal_stop_codon	4966..4968(-)		WP_011730642.1	poly-gamma-glutamate hydrolase family protein	97.2	39.8	77.9
MGA_4022	LOCUS_39830	sequence075:23230..24882(-)	partial			WP_010886091.1	PE family protein	26.2	23.9	57.9
MGA_4026	LOCUS_39870	sequence075:27830..28204(-)	frameshift		28193	WP_003404823.1	STAS domain-containing protein	96.8	46.7	82.5
MGA_4031	LOCUS_39920	sequence076:2552..4186(+)	partial			WP_003899118.1	PecA family PE domain-processing aspartic protease	21.0	21.1	49.2
MGA_4064	LOCUS_40230	sequence077:6658..7854(+)	frameshift		7482	WP_003899865.1	aldehyde dehydrogenase	68.1	55.4	79.7
MGA_4065	LOCUS_40240	sequence077:7763..8125(+)	frameshift		7482	WP_003899865.1	aldehyde dehydrogenase	98.3	24.2	87.3
MGA_4069	LOCUS_40280	sequence077:10013..14653(-)	partial			WP_027084589.1	non-ribosomal peptide synthetase	42.0	19.7	34.1
MGA_4072	LOCUS_40310	sequence077:17093..17224(-)	internal_stop_codon	17252..17254(-)		WP_003896282.1	hypothetical protein	100.0	43.0	72.1
MGA_4073	LOCUS_40320	sequence077:17252..17389(-)	internal_stop_codon	17252..17254(-)		WP_003896282.1	hypothetical protein	95.6	43.0	74.4
MGA_4093	LOCUS_40510	sequence078:8926..10305(+)	frameshift,internal_stop_codon	10303..10305(+)	10290	WP_010886116.1	PE family protein	30.3	28.3	57.6
MGA_4094	LOCUS_40520	sequence078:10315..11604(+)	frameshift,internal_stop_codon	10303..10305(+)	10272,10371	WP_010950544.1	PE family protein	30.8	27.5	54.1
MGA_4104	LOCUS_40620	sequence078:24011..24760(+)	partial			WP_010950543.1	hypothetical protein	38.6	41.1	46.9
MGA_4107	LOCUS_40650	sequence078:28128..>28867(-)	partial			WP_003407378.1	esterase PE16	56.3	26.1	63.8
MGA_4120	LOCUS_40770	sequence079:15750..16283(+)	frameshift		15684	WP_003898829.1	DUF2017 domain-containing protein	97.7	80.7	78.4
MGA_4152	LOCUS_41070	sequence080:17302..17874(+)	partial			WP_003401488.1	type VII secretion system ESX-3 target PPE4	96.8	35.7	59.5
MGA_4162	LOCUS_41170	sequence080:27302..27529(+)	partial			WP_003898463.1	crotonase/enoyl-CoA hydratase family protein	96.0	23.7	88.9
MGA_4163	LOCUS_41180	sequence081:229..2064(-)	partial			WP_003905649.1	PE family protein	20.9	19.6	49.2
MGA_4189	LOCUS_41430	sequence082:4..1209(-)	partial			WP_003899357.1	AMP-binding protein	91.0	66.7	77.3
MGA_4194	LOCUS_41480	sequence082:5178..6545(-)	internal_stop_codon	6675..6677(-)		WP_003412803.1	DUF853 domain-containing protein	100.0	84.8	85.9
MGA_4197	LOCUS_41510	sequence082:8567..9166(-)	partial			WP_013226070.1	TetR/AcrR family transcriptional regulator	42.2	40.0	46.4
MGA_4200	LOCUS_41540	sequence082:11243..12682(+)	frameshift		12568	WP_011727446.1	MCE family protein	91.2	81.6	65.3
MGA_4207	LOCUS_41610	sequence082:19341..19970(+)	frameshift		19299	WP_029104495.1	RsiV family protein	98.6	79.4	70.7
MGA_4212	LOCUS_41660	sequence082:25036..25263(-)	partial			WP_003412942.1	DUF3618 domain-containing protein	68.0	68.0	72.5
MGA_4215	LOCUS_41690	sequence082:26955..27461(+)	partial			WP_011728916.1	DUF5931 domain-containing protein	43.5	19.3	68.5
MGA_4217	LOCUS_41710	sequence083:1381..1878(-)	internal_stop_codon	1897..1899(-)		WP_003408545.1	ATP transporter ATP-binding protein/permease	98.2	18.7	61.1
MGA_4218	LOCUS_41720	sequence083:1897..2151(-)	frameshift,internal_stop_codon	1897..1899(-)	2386	WP_003408545.1	ATP transporter ATP-binding protein/permease	100.0	9.7	70.2
MGA_4219	LOCUS_41730	sequence083:2069..3232(-)	frameshift,internal_stop_codon	1896..1898(-)	2394,3390,3463	WP_003893049.1	FHA domain-containing protein	79.1	33.4	73.1
MGA_4228	LOCUS_41820	sequence083:14294..18085(+)	frameshift		18048,14282,17636,17687	WP_067456433.1	type I polyketide synthase	98.3	30.8	47.4
MGA_4229	LOCUS_41830	sequence083:18106..21525(+)	frameshift		18046	WP_067456433.1	type I polyketide synthase	58.1	17.2	46.1
MGA_4231	LOCUS_41850	sequence083:21923..22351(-)	partial			WP_005084922.1	heme-binding protein	62.7	80.9	62.9
MGA_4235	LOCUS_41890	sequence083:25956..26624(+)	frameshift		26552	WP_003417452.1	NADP-dependent isocitrate dehydrogenase	89.6	48.7	90.5
MGA_4236	LOCUS_41900	sequence083:26584..27135(+)	frameshift		26552	WP_003417452.1	NADP-dependent isocitrate dehydrogenase	96.7	43.3	89.8
MGA_4238	LOCUS_41920	sequence084:366..1481(+)	partial			WP_011085964.1	NAD(P)/FAD-dependent oxidoreductase	98.9	57.5	40.8
MGA_4239	LOCUS_41930	sequence084:1492..1956(+)	internal_stop_codon	1954..1956(+)		WP_003911674.1	alcohol dehydrogenase family protein	100.0	40.1	76.0
MGA_4240	LOCUS_41940	sequence084:1996..2517(+)	internal_stop_codon	1954..1956(+)		WP_003409522.1	alcohol dehydrogenase family protein	98.8	50.1	81.3
MGA_4245	LOCUS_41990	sequence084:4511..5005(-)	frameshift,internal_stop_codon	5205..5207(-)	5030	WP_003905677.1	macro domain-containing protein	92.7	44.3	84.9
MGA_4252	LOCUS_42060	sequence084:10563..10937(-)	frameshift		11055	WP_003409545.1	FAD-dependent oxidoreductase	97.6	37.8	72.7
MGA_4253	LOCUS_42070	sequence084:10969..11547(-)	frameshift		11055	WP_003899072.1	FAD-dependent oxidoreductase	94.3	55.0	60.8
MGA_4267	LOCUS_42210	sequence084:24541..>26609(-)	partial			WP_003906700.1	PPE family protein	88.4	70.1	49.4
MGA_4268	LOCUS_42220	sequence085:158..376(+)	partial			WP_003899860.1	radical SAM protein	70.8	11.7	54.9
MGA_4271	LOCUS_42250	sequence085:3686..4000(+)	frameshift		3684	WP_003903500.1	MmpS family transport accessory protein	98.1	68.9	74.5
MGA_4272	LOCUS_42260	sequence085:3997..4470(+)	frameshift		4350	WP_003407779.1	MMPL family transporter	74.5	12.1	68.4
MGA_4296	LOCUS_42500	sequence086:2216..4267(+)	partial			WP_010950952.1	type VII secretion system ESX-1 associated protein EspK	48.3	44.6	51.5
MGA_4306	LOCUS_42600	sequence086:15551..16921(-)	partial			WP_010926041.1	aromatic ring-hydroxylating dioxygenase subunit alpha	44.3	52.5	36.6
MGA_4313	LOCUS_42670	sequence086:24052..24261(-)	partial			WP_003400629.1	hypothetical protein	91.3	48.8	60.3
MGA_4334	LOCUS_42880	sequence087:21351..22448(+)	partial			WP_003407494.1	PE family protein	38.9	38.4	59.9
MGA_4338	LOCUS_42920	sequence088:1029..3605(-)	partial			WP_010886118.1	PE family protein	11.4	13.1	53.1
MGA_4339	LOCUS_42930	sequence088:3892..5247(+)	partial			WP_003113577.1	alpha/beta fold hydrolase	57.4	81.2	32.6
MGA_4347	LOCUS_43010	sequence088:13405..15504(+)	partial			WP_010886120.1	PPE family protein	51.4	46.9	44.6
MGA_4356	LOCUS_43100	sequence088:22827..23069(+)	frameshift,internal_stop_codon	23067..23069(+)	23327	WP_099318959.1	PE family protein	91.2	15.9	57.5
MGA_4358	LOCUS_43110	sequence089:62..349(-)	partial			WP_003900263.1	DUF427 domain-containing protein	85.3	31.9	74.1
MGA_4361	LOCUS_43140	sequence089:1274..2461(-)	partial			WP_011388984.1	esterase-like activity of phytase family protein	59.5	63.2	31.5
MGA_4363	LOCUS_43160	sequence089:2668..2946(-)	internal_stop_codon	2959..2961(-)		WP_011729097.1	hypothetical protein	95.7	33.8	76.1
MGA_4364	LOCUS_43170	sequence089:2959..3444(-)	internal_stop_codon	2959..2961(-)		WP_011729097.1	hypothetical protein	100.0	61.9	59.0
MGA_4367	LOCUS_43200	sequence089:5766..7697(+)	frameshift		5689	WP_013229304.1	FAD-dependent oxidoreductase	99.5	79.0	58.4
MGA_4370	LOCUS_43230	sequence089:9121..9774(+)	frameshift,internal_stop_codon	9773..9775(+)	9043	WP_013229312.1	aromatic ring-hydroxylating dioxygenase subunit alpha	100.0	56.8	64.1
MGA_4371	LOCUS_43240	sequence089:9784..9990(+)	internal_stop_codon	9772..9774(+)		WP_013229312.1	aromatic ring-hydroxylating dioxygenase subunit alpha	86.8	15.8	62.7
MGA_4378	LOCUS_43310	sequence089:16793..18043(-)	internal_stop_codon	18044..18046(-)		WP_010950405.1	siderophore RND transporter MmpL4	97.8	42.1	77.1
MGA_4379	LOCUS_43320	sequence089:18044..19057(-)	frameshift,internal_stop_codon	18044..18046(-)	19169	WP_003898458.1	siderophore RND transporter MmpL4	99.1	34.5	70.7
MGA_4380	LOCUS_43330	sequence089:19158..19610(-)	frameshift		19175	WP_003898458.1	siderophore RND transporter MmpL4	98.0	15.6	67.5
MGA_4386	LOCUS_43380	sequence090:423..1997(+)	partial			WP_010886172.1	PE family protein	91.8	24.8	28.3
MGA_4388	LOCUS_43400	sequence090:3080..4321(+)	partial			WP_005114807.1	divalent metal cation transporter	81.4	60.6	35.7
MGA_4395	LOCUS_43460	sequence090:11018..11854(-)	internal_stop_codon	11972..11974(-)		WP_010950822.1	wax ester/triacylglycerol synthase family O-acyltransferase	87.8	50.2	43.4
MGA_4396	LOCUS_43470	sequence090:11972..12457(-)	internal_stop_codon	11972..11974(-)		WP_067221857.1	wax ester/triacylglycerol synthase family O-acyltransferase	90.1	30.7	53.8
MGA_4397	LOCUS_43480	sequence090:12454..13302(-)	partial			WP_011029339.1	SDR family oxidoreductase	94.3	46.0	43.5
MGA_4399	LOCUS_43500	sequence090:13724..14689(+)	partial			WP_235624065.1	helix-turn-helix domain-containing protein	76.3	44.2	27.1
MGA_4403	LOCUS_43540	sequence090:17358..18587(+)	frameshift		18416	WP_014467867.1	molybdopterin-dependent oxidoreductase	85.3	49.0	49.6
MGA_4404	LOCUS_43550	sequence090:18487..19587(+)	frameshift		18416	WP_014467867.1	molybdopterin-dependent oxidoreductase	100.0	48.6	49.3
MGA_4407	LOCUS_43570	sequence090:21838..23280(+)	partial			WP_005085810.1	primary-amine oxidase	97.9	72.8	69.1
MGA_4409	LOCUS_43580	sequence091:396..869(+)	partial			WP_003408366.1	TetR family transcriptional regulator	97.5	73.9	72.5
MGA_4411	LOCUS_43600	sequence091:3714..4994(-)	partial			WP_003412039.1	PE family protein	47.2	48.9	38.7
MGA_4423	LOCUS_43720	sequence091:17973..18182(-)	frameshift		18187	WP_011727512.1	NAD(+)--rifampin ADP-ribosyltransferase	100.0	48.6	76.8
MGA_4424	LOCUS_43730	sequence091:18161..18391(-)	frameshift		18187	WP_011727512.1	NAD(+)--rifampin ADP-ribosyltransferase	88.2	47.2	79.1
MGA_4445	LOCUS_43940	sequence092:18264..19283(+)	frameshift		18029,18062	WP_003909105.1	type VII secretion system ESX-1 associated protein EspI	87.3	44.4	67.2
MGA_4447	LOCUS_43960	sequence092:20942..21778(+)	partial			WP_003901751.1	type VII secretion system ESX-1 associated protein EspJ	83.5	73.9	47.9
MGA_4461	LOCUS_44090	sequence093:11072..11875(-)	partial			WP_003405732.1	RDD family protein	62.2	69.2	83.1
MGA_4464	LOCUS_44120	sequence093:15366..15794(+)	frameshift		15352	WP_003405726.1	SGNH/GDSL hydrolase family protein	88.7	40.1	66.7
MGA_4471	LOCUS_44180	sequence094:82..1038(+)	partial			WP_003910691.1	PPE family protein	99.7	72.4	35.5
MGA_4482	LOCUS_44290	sequence094:10937..11425(-)	partial			WP_011730116.1	acyl-CoA dehydrogenase family protein	63.0	23.6	65.7
MGA_4484	LOCUS_44310	sequence094:12209..12613(-)	internal_stop_codon	12629..12631(-)		WP_011730117.1	phosphotransferase family protein	70.9	28.3	54.6
MGA_4485	LOCUS_44320	sequence094:12629..13270(-)	internal_stop_codon	12629..12631(-)		WP_011730117.1	phosphotransferase family protein	92.5	58.0	55.3
MGA_4487	LOCUS_44340	sequence094:14944..15576(-)	frameshift		15000,15003,14997,14982	WP_010886108.1	PE family protein	58.6	14.3	52.0
MGA_4488	LOCUS_44350	sequence094:15785..18814(-)	partial			WP_010886177.1	PE family protein	11.4	20.2	42.9
MGA_4493	LOCUS_44400	sequence094:22492..22944(+)	partial			WP_003420529.1	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	82.7	33.0	86.3
MGA_4495	LOCUS_44420	sequence095:557..1036(-)	partial			WP_011728059.1	nitroreductase family deazaflavin-dependent oxidoreductase	67.9	66.7	48.6
MGA_4496	LOCUS_44430	sequence095:1057..1578(-)	frameshift,internal_stop_codon	1455..1457(-)	1473,1394,1582	WP_005097973.1	TetR family transcriptional regulator	100.0	76.6	32.6
MGA_4497	LOCUS_44440	sequence095:2535..3095(+)	internal_stop_codon	3093..3095(+)		WP_013225438.1	response regulator transcription factor	83.9	69.0	51.3
MGA_4498	LOCUS_44450	sequence095:3111..3278(+)	internal_stop_codon	3093..3095(+)		WP_013225438.1	response regulator transcription factor	92.7	22.6	64.7
MGA_4501	LOCUS_44480	sequence095:5831..6043(-)	frameshift		6093	WP_003407583.1	TVP38/TMEM64 family protein	91.4	25.0	67.2
MGA_4502	LOCUS_44490	sequence095:6016..6573(-)	frameshift		6093	WP_003407583.1	TVP38/TMEM64 family protein	84.3	61.9	63.5
MGA_4506	LOCUS_44530	sequence095:12182..12550(+)	internal_stop_codon	12548..12550(+)		WP_003407599.1	serine hydrolase domain-containing protein	87.7	24.9	87.9
MGA_4507	LOCUS_44540	sequence095:12575..13312(+)	internal_stop_codon	12548..12550(+)		WP_003407599.1	serine hydrolase domain-containing protein	100.0	57.3	79.7
MGA_4516	LOCUS_44630	sequence095:21518..22465(+)	frameshift		22324	WP_003407612.1	glycosyltransferase family 2 protein	85.7	78.9	84.4
MGA_4517	LOCUS_44640	sequence095:22550..22777(+)	partial			WP_003898901.1	phytanoyl-CoA dioxygenase family protein	82.7	22.7	66.1
MGA_4519	LOCUS_44660	sequence096:1084..1422(+)	internal_stop_codon	1036..1038(+)		WP_011031562.1	VOC family protein	83.9	59.4	61.1
MGA_4520	LOCUS_44670	sequence096:1425..2012(-)	partial			WP_010908039.1	TetR/AcrR family transcriptional regulator	45.6	61.3	59.6
MGA_4531	LOCUS_44780	sequence096:13766..14944(-)	partial			WP_005064806.1	TetR/AcrR family transcriptional regulator	32.7	56.9	32.4
MGA_4533	LOCUS_44800	sequence096:18330..18944(+)	partial			WP_030568499.1	IS110 family transposase	98.0	48.1	44.0
MGA_4534	LOCUS_44810	sequence096:19533..19808(+)	internal_stop_codon	19806..19808(+)		WP_003403919.1	aldehyde dehydrogenase	85.7	16.0	61.5
MGA_4535	LOCUS_44820	sequence096:19950..21026(+)	internal_stop_codon	19806..19808(+)		WP_003897260.1	aldehyde dehydrogenase	98.3	72.0	53.5
MGA_4536	LOCUS_44830	sequence096:21949..22665(+)	frameshift		21965	WP_003400998.1	PE-PPE domain-containing protein	92.0	37.1	53.6
MGA_4537	LOCUS_44840	sequence097:59..1162(-)	partial			WP_003410042.1	NAD(P)/FAD-dependent oxidoreductase	98.4	67.2	82.0
MGA_4541	LOCUS_44880	sequence097:3815..5146(-)	partial			WP_010886125.1	PE domain-containing protein	73.4	37.3	32.1
MGA_4544	LOCUS_44910	sequence097:7623..8363(-)	frameshift		7814	WP_003410019.1	hemerythrin domain-containing protein	72.8	70.6	68.5
MGA_4549	LOCUS_44960	sequence097:14973..15476(+)	partial			WP_001082704.1	alcohol dehydrogenase catalytic domain-containing protein	95.2	46.0	34.5
MGA_4550	LOCUS_44970	sequence097:16549..16686(+)	internal_stop_codon	16684..16686(+)		WP_083151429.1	GMC family oxidoreductase N-terminal domain-containing protein	93.3	7.5	95.2
MGA_4563	LOCUS_45100	sequence098:3843..4205(-)	internal_stop_codon	4415..4417(-)		WP_005081171.1	cysteine hydrolase	76.7	40.9	72.8
MGA_4565	LOCUS_45120	sequence098:5277..6770(-)	internal_stop_codon	6798..6800(-)		WP_003408781.1	DUF4407 domain-containing protein	99.4	80.1	66.0
MGA_4566	LOCUS_45130	sequence098:6798..7109(-)	internal_stop_codon	6798..6800(-)		WP_003408781.1	DUF4407 domain-containing protein	94.2	16.8	60.0
MGA_4577	LOCUS_45240	sequence098:20753..20929(+)	internal_stop_codon	20927..20929(+)		WP_010950602.1	type VII secretion system ESX-5 target PPE26	94.8	14.0	58.2
MGA_4579	LOCUS_45260	sequence098:22107..22406(+)	partial			WP_003406566.1	DUF732 domain-containing protein	79.8	69.0	43.0
MGA_4584	LOCUS_45310	sequence099:4722..5957(-)	partial			WP_011726850.1	LuxR C-terminal-related transcriptional regulator	71.8	74.7	36.1
MGA_4585	LOCUS_45320	sequence099:6280..7317(+)	partial			WP_013227439.1	cytochrome P450	89.3	73.2	37.5
MGA_4597	LOCUS_45440	sequence099:18223..18681(+)	frameshift		18654	WP_003899110.1	Mce associated membrane protein	75.0	71.2	62.3
MGA_4603	LOCUS_45500	sequence100:66..1601(-)	partial			WP_211695346.1	PPE family protein	99.0	15.5	51.7
MGA_4612	LOCUS_45590	sequence100:10203..11396(-)	partial			WP_011730106.1	OB-fold domain-containing protein	98.7	69.3	43.0
MGA_4613	LOCUS_45600	sequence100:11447..11803(+)	partial			WP_011730106.1	OB-fold domain-containing protein	77.1	16.7	40.2
MGA_4621	LOCUS_45680	sequence100:19628..20212(-)	partial			WP_014877829.1	hypothetical protein	61.3	72.0	38.6
MGA_4634	LOCUS_45800	sequence101:9419..9775(+)	partial			WP_223495338.1	hypothetical protein	34.7	60.0	59.5
MGA_4635	LOCUS_45810	sequence101:9799..11370(-)	frameshift		11416	WP_003899240.1	Hsp70 family protein	67.5	56.4	60.5
MGA_4638	LOCUS_45840	sequence101:13619..14296(+)	internal_stop_codon	14294..14296(+)		WP_003411654.1	methyl-branched lipid omega-hydroxylase Cyp124	96.9	50.9	82.1
MGA_4639	LOCUS_45850	sequence101:14357..14920(+)	internal_stop_codon	14294..14296(+)		WP_003411654.1	methyl-branched lipid omega-hydroxylase Cyp124	99.5	43.5	86.6
MGA_4641	LOCUS_45870	sequence101:16336..16962(-)	partial			WP_010940624.1	class I SAM-dependent methyltransferase	51.9	43.1	33.6
MGA_4649	LOCUS_45950	sequence101:21007..21282(-)	partial			WP_161270384.1	potassium channel family protein	87.9	30.2	52.5
MGA_4651	LOCUS_45970	sequence102:888..1379(-)	internal_stop_codon	888..890(-)		WP_003901551.1	PPE family protein	100.0	39.9	69.9
MGA_4667	LOCUS_46130	sequence102:20106..20930(-)	frameshift,internal_stop_codon	19876..19878(-),19877..19879(-)	19936,19816,19896	WP_010950840.1	PPE family protein	90.1	38.0	44.5
MGA_4669	LOCUS_46150	sequence103:1..1502(+)	partial			WP_010950436.1	PE family protein	13.2	7.9	63.6
MGA_4670	LOCUS_46160	sequence103:1722..4259(+)	partial			WP_010886090.1	PE family protein	14.0	13.8	55.7
MGA_4679	LOCUS_46250	sequence103:10112..11830(-)	frameshift		10464,10144,10498,10153,10158,11022,10162,10164	WP_010950451.1	PE family protein	20.8	14.3	50.4
MGA_4686	LOCUS_46320	sequence103:20338..>20941(-)	partial			WP_003900263.1	DUF427 domain-containing protein	85.5	67.3	83.0
MGA_4699	LOCUS_46450	sequence104:12890..13648(+)	frameshift		13570	WP_003892164.1	xanthine dehydrogenase family protein subunit M	85.3	72.6	86.0
MGA_4700	LOCUS_46460	sequence104:13575..13817(+)	frameshift		13570	WP_003401869.1	xanthine dehydrogenase family protein subunit M	95.0	26.6	69.7
MGA_4705	LOCUS_46510	sequence104:17879..18217(+)	frameshift		17835	WP_003401864.1	NTP transferase domain-containing protein	100.0	56.9	71.4
MGA_4707	LOCUS_46530	sequence104:19165..19785(+)	frameshift		19160	WP_011727165.1	SRPBCC family protein	90.8	80.1	66.8
MGA_4708	LOCUS_46540	sequence104:19792..20664(+)	partial			WP_010950389.1	VWA domain-containing protein	97.6	71.0	60.1
MGA_4721	LOCUS_46670	sequence105:12781..13170(-)	partial			WP_003900521.1	mechanosensitive ion channel	96.1	25.8	55.6
MGA_4722	LOCUS_46680	sequence105:13229..14176(-)	frameshift		13450	WP_003900521.1	mechanosensitive ion channel	77.5	50.7	66.8
MGA_4725	LOCUS_46710	sequence105:17928..19229(-)	frameshift		19228	WP_003412557.1	adenylate/guanylate cyclase domain-containing protein	100.0	59.3	79.7
MGA_4726	LOCUS_46720	sequence105:19187..20122(-)	frameshift		19231	WP_003412557.1	adenylate/guanylate cyclase domain-containing protein	95.8	40.8	74.2
MGA_4733	LOCUS_46790	sequence106:5733..6035(-)	partial			WP_003411107.1	hypothetical protein	99.0	73.7	82.2
MGA_4740	LOCUS_46860	sequence106:12353..12604(-)	frameshift,internal_stop_codon	12352..12354(-),12346..12348(-)	12648,12324	WP_012296512.1	recombinase family protein	100.0	15.1	81.9
MGA_4741	LOCUS_46870	sequence106:13252..13452(-)	partial			WP_005110629.1	plasmid replication initiator protein	90.9	12.0	61.7
MGA_4744	LOCUS_46900	sequence106:14758..14898(-)	internal_stop_codon	14758..14760(-),14722..14724(-),14932..14934(-)		WP_145162746.1	IS3-like element ISSme1 family transposase	91.3	11.1	55.8
MGA_4746	LOCUS_46920	sequence106:15672..15890(+)	frameshift		15836	WP_011727856.1	IS256 family transposase	73.6	12.3	70.4
MGA_4747	LOCUS_46930	sequence106:15851..16054(+)	frameshift		15836	WP_011727856.1	IS256 family transposase	47.8	7.3	81.2
MGA_4750	LOCUS_46960	sequence106:16552..17505(-)	frameshift		17516	WP_012296390.1	RND family transporter	95.3	30.8	70.2
MGA_4751	LOCUS_46970	sequence106:17502..19412(-)	frameshift		17516	WP_012296533.1	RND family transporter	96.9	63.5	58.1
MGA_4768	LOCUS_47140	sequence107:18488..19471(+)	partial			WP_010886079.1	PE family protein	47.4	23.9	39.4
MGA_4769	LOCUS_47150	sequence108:86..733(+)	partial			WP_014000186.1	PPE domain-containing protein	97.7	6.0	64.3
MGA_4770	LOCUS_47160	sequence108:1073..3763(+)	frameshift		2654,3235,3238,3241,3244,2670,2617	WP_003906336.1	PPE family protein	51.8	21.9	48.8
MGA_4771	LOCUS_47170	sequence108:3909..6473(+)	frameshift		4608,4344,4744,3690,4238	WP_122524938.1	PPE domain-containing protein	99.5	24.8	42.7
MGA_4776	LOCUS_47220	sequence108:10997..11851(+)	frameshift		11824	WP_003898409.1	amino acid permease	97.2	56.5	79.3
MGA_4777	LOCUS_47230	sequence108:11848..12459(+)	frameshift		11824	WP_003898409.1	amino acid permease	93.6	39.0	80.0
MGA_4778	LOCUS_47240	sequence108:12656..13033(+)	partial			WP_010886091.1	PE family protein	73.6	15.2	45.7
MGA_4787	LOCUS_47320	sequence109:835..2946(+)	frameshift		2601	WP_003403397.1	arylsulfatase AtsD	81.8	74.0	55.1
MGA_4805	LOCUS_47500	sequence110:176..1471(-)	partial			WP_013225697.1	amidohydrolase family protein	71.9	79.8	25.2
MGA_4806	LOCUS_47510	sequence110:1486..2700(-)	partial			WP_013225697.1	amidohydrolase family protein	71.8	72.9	31.1
MGA_4810	LOCUS_47550	sequence110:3951..4451(-)	frameshift		3998	WP_013530979.1	SDR family NAD(P)-dependent oxidoreductase	82.5	47.9	41.4
MGA_4824	LOCUS_47690	sequence110:16034..16903(-)	frameshift		16026,16051	WP_013225925.1	polyprenyl synthetase family protein	90.3	71.4	58.8
MGA_4846	LOCUS_47900	sequence112:383..868(-)	frameshift		894	WP_003901256.1	PPE family protein	97.5	22.7	44.9
MGA_4847	LOCUS_47910	sequence112:841..2151(-)	frameshift		900	WP_003400998.1	PE-PPE domain-containing protein	95.9	67.9	47.5
MGA_4850	LOCUS_47940	sequence112:6229..7539(-)	frameshift		7693	WP_003400998.1	PE-PPE domain-containing protein	99.3	73.6	72.1
MGA_4861	LOCUS_48050	sequence113:104..760(+)	frameshift		733	WP_003911847.1	phospholipase C	97.7	41.0	75.1
MGA_4862	LOCUS_48060	sequence113:757..1287(+)	frameshift		742	WP_003911847.1	phospholipase C	100.0	33.8	72.7
MGA_4864	LOCUS_48080	sequence113:3028..4116(-)	frameshift		4220	WP_010950630.1	adenylate/guanylate cyclase domain-containing protein	100.0	79.2	73.5
MGA_4865	LOCUS_48090	sequence113:4212..4403(-)	frameshift		4220	WP_003916001.1	alpha/beta fold hydrolase	96.8	13.2	72.1
MGA_4878	LOCUS_48220	sequence114:121..642(+)	partial			WP_013225883.1	non-ribosomal peptide synthetase	98.8	5.1	29.9
MGA_4880	LOCUS_48240	sequence114:1437..2279(+)	frameshift		2234	WP_010907553.1	p-hydroxybenzoic acid--AMP ligase FadD22	95.4	37.8	65.9
MGA_4883	LOCUS_48270	sequence114:10967..12352(+)	partial			WP_012257994.1	AMP-binding protein	55.5	53.4	28.1
MGA_4884	LOCUS_48280	sequence114:12457..12720(-)	partial			WP_003892281.1	DUF1707 domain-containing protein	79.3	49.3	38.7
MGA_4888	LOCUS_48320	sequence114:16103..16843(+)	partial			WP_189284839.1	LOG family protein	96.7	57.0	32.4
MGA_4892	LOCUS_48360	sequence115:3162..3440(+)	frameshift		3410	WP_003900432.1	lysophospholipid acyltransferase family protein	95.7	30.7	71.6
MGA_4893	LOCUS_48370	sequence115:3440..3985(+)	frameshift		3410	WP_003900432.1	lysophospholipid acyltransferase family protein	99.4	62.7	80.0
MGA_4900	LOCUS_48440	sequence115:13431..14282(-)	frameshift		14308	WP_003899979.1	bifunctional GNAT family N-acetyltransferase/aminoglycoside 3'-phosphotransferase/choline kinase family protein	97.2	58.0	69.8
MGA_4901	LOCUS_48450	sequence115:14243..15292(-)	frameshift		14308	WP_003899979.1	bifunctional GNAT family N-acetyltransferase/aminoglycoside 3'-phosphotransferase/choline kinase family protein	51.6	37.1	65.6
MGA_4907	LOCUS_48510	sequence116:2542..3057(+)	frameshift		2489,2508,2541	WP_009936776.1	DUF1697 domain-containing protein	100.0	82.6	72.7
MGA_4908	LOCUS_48520	sequence116:3072..3647(+)	frameshift		3617	WP_003898744.1	class I SAM-dependent methyltransferase	91.6	62.1	81.1
MGA_4909	LOCUS_48530	sequence116:3637..3909(+)	frameshift		3617	WP_003898744.1	class I SAM-dependent methyltransferase	98.9	31.6	73.0
MGA_4922	LOCUS_48660	sequence116:15887..16330(+)	partial			WP_003408248.1	3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein	95.9	41.4	47.9
MGA_4923	LOCUS_48670	sequence117:226..564(-)	frameshift,internal_stop_codon	226..228(-),208..210(-)	177	WP_011727590.1	IS1380-like element ISMsm11 family transposase	100.0	24.0	79.5
MGA_4924	LOCUS_48680	sequence117:869..1357(-)	partial			WP_000555401.1	IS110-like element ISEc45 family transposase	80.2	34.2	39.2
MGA_4927	LOCUS_48710	sequence117:4434..4889(+)	frameshift,internal_stop_codon	4313..4315(+),4289..4291(+)	4393,4171	WP_011728521.1	IS30-like element ISMsm8 family transposase	99.3	32.2	72.0
MGA_4943	LOCUS_48870	sequence118:3828..4409(-)	frameshift		4491	WP_003405815.1	DUF4245 domain-containing protein	99.5	82.4	75.0
MGA_4947	LOCUS_48910	sequence118:8207..8665(-)	internal_stop_codon	8675..8677(-)		WP_019632285.1	adenylate/guanylate cyclase domain-containing protein	99.3	15.6	58.6
MGA_4948	LOCUS_48920	sequence118:8675..9715(-)	internal_stop_codon	8675..8677(-)		WP_003419638.1	adenylate/guanylate cyclase domain-containing protein	80.1	52.6	35.6
MGA_4956	LOCUS_48990	sequence119:5..793(-)	partial			WP_003906797.1	multidrug resistance protein Stp	93.9	45.4	75.6
MGA_4982	LOCUS_49250	sequence121:146..4123(+)	frameshift		3953,3955,3815,3724,3919	WP_163682492.1	non-ribosomal peptide synthetase	94.9	22.9	51.6
MGA_4983	LOCUS_49260	sequence121:4017..4661(+)	frameshift		3958	WP_003400794.1	non-ribosomal peptide synthetase Nrp	91.1	7.8	48.7
MGA_4986	LOCUS_49290	sequence121:5532..6563(-)	internal_stop_codon	5532..5534(-)		WP_003409406.1	cytochrome P450	99.7	78.1	78.9
MGA_4990	LOCUS_49330	sequence121:8500..8913(-)	partial			WP_003409420.1	resuscitation-promoting factor RpfC	95.6	73.9	63.2
MGA_4993	LOCUS_49360	sequence121:10583..10933(-)	partial			WP_013229965.1	TIGR03621 family F420-dependent LLM class oxidoreductase	76.7	31.6	44.0
MGA_4994	LOCUS_49370	sequence121:10890..11378(+)	partial			WP_003410707.1	hypothetical protein	85.8	72.7	38.8
MGA_5006	LOCUS_49480	sequence122:8086..8508(-)	frameshift		8548	WP_003899500.1	DUF1802 family protein	100.0	77.3	80.0
MGA_5012	LOCUS_49540	sequence122:12802..13482(+)	partial			WP_189232996.1	NAD(P)/FAD-dependent oxidoreductase	96.9	64.2	49.1
MGA_5013	LOCUS_49550	sequence122:13421..14323(-)	frameshift,internal_stop_codon	14345..14347(-)	13573	WP_003414499.1	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	83.3	69.4	81.2
MGA_5014	LOCUS_49560	sequence122:14345..14596(-)	internal_stop_codon	14345..14347(-)		WP_003414499.1	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	100.0	23.1	83.1
MGA_5015	LOCUS_49570	sequence122:14589..14858(-)	partial			WP_010950783.1	ABC transporter substrate-binding protein	100.0	20.4	74.2
MGA_5016	LOCUS_49580	sequence123:87..638(+)	partial			WP_003899357.1	AMP-binding protein	99.5	33.3	79.1
MGA_5019	LOCUS_49610	sequence123:2199..3344(+)	frameshift		3293	WP_003412778.1	acetyl-/propionyl-CoA carboxylase subunit beta	94.8	67.1	88.1
MGA_5020	LOCUS_49620	sequence123:3331..3801(+)	frameshift		3293	WP_003412778.1	acetyl-/propionyl-CoA carboxylase subunit beta	100.0	29.5	91.7
MGA_5021	LOCUS_49630	sequence123:3805..4881(+)	internal_stop_codon	4879..4881(+)		WP_003899356.1	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	100.0	54.7	87.7
MGA_5022	LOCUS_49640	sequence123:4882..5454(+)	internal_stop_codon	4879..4881(+),5452..5454(+)		WP_003899356.1	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	98.9	28.7	75.5
MGA_5023	LOCUS_49650	sequence123:5578..5814(+)	internal_stop_codon	5452..5454(+)		WP_003899356.1	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	78.2	9.3	77.0
MGA_5031	LOCUS_49730	sequence123:13170..13532(-)	partial			WP_003899794.1	hypothetical protein	70.8	75.9	75.3
MGA_5032	LOCUS_49740	sequence123:13822..14214(-)	partial			WP_003899794.1	hypothetical protein	65.4	75.9	75.3
MGA_5038	LOCUS_49800	sequence124:6853..8106(+)	partial			WP_003911027.1	PE family protein	28.3	26.9	58.5
MGA_5046	LOCUS_49870	sequence125:2147..3289(-)	frameshift		3312	WP_013529943.1	FAD-containing oxidoreductase	98.9	81.4	66.0
MGA_5050	LOCUS_49910	sequence125:5384..7480(-)	partial			WP_010886133.1	PE family protein	16.8	23.5	56.4
MGA_5052	LOCUS_49930	sequence125:9311..9436(-)	internal_stop_codon	9634..9636(-)		WP_003411056.1	methionine synthase	100.0	3.4	90.2
MGA_5057	LOCUS_49980	sequence126:33..962(-)	partial			WP_003900817.1	PE-PPE domain-containing protein	94.5	60.4	46.9
MGA_5058	LOCUS_49990	sequence126:1114..1632(-)	internal_stop_codon	1633..1635(-)		WP_003900817.1	PE-PPE domain-containing protein	99.4	34.7	79.3
MGA_5059	LOCUS_50000	sequence126:1633..2682(-)	internal_stop_codon	1633..1635(-)		WP_003900817.1	PE-PPE domain-containing protein	95.1	64.9	63.9
MGA_5068	LOCUS_50090	sequence126:10296..11111(+)	frameshift		10946	WP_011730112.1	LLM class F420-dependent oxidoreductase	80.1	71.0	77.0
MGA_5071	LOCUS_50120	sequence126:13171..13854(+)	partial			WP_010920184.1	CaiB/BaiF CoA-transferase family protein	90.7	52.0	52.2
MGA_5072	LOCUS_50130	sequence127:63..656(-)	partial			WP_011035716.1	restriction endonuclease subunit S	94.4	45.3	32.1
MGA_5075	LOCUS_50160	sequence127:2195..3076(-)	internal_stop_codon	2195..2197(-)		WP_002681381.1	type I restriction-modification system subunit M	100.0	33.9	57.4
MGA_5087	LOCUS_50280	sequence128:576..2138(+)	frameshift,internal_stop_codon	2136..2138(+),1437..1439(+)	2144,1793,2082,2147,1475,2088,2156,2036,1622,1403	WP_005112588.1	non-ribosomal peptide synthetase	99.6	6.2	55.7
MGA_5088	LOCUS_50290	sequence128:2209..4032(+)	frameshift,internal_stop_codon	4030..4032(+),2136..2138(+)	2168	WP_003400794.1	non-ribosomal peptide synthetase Nrp	100.0	23.4	47.2
MGA_5089	LOCUS_50300	sequence128:4156..5388(+)	internal_stop_codon	4030..4032(+)		WP_163682492.1	non-ribosomal peptide synthetase	40.0	3.1	54.6
MGA_5096	LOCUS_50370	sequence128:11861..12136(-)	frameshift,internal_stop_codon	11861..11863(-)	11845	WP_003402695.1	glutaredoxin family protein	90.1	84.5	78.0
MGA_5097	LOCUS_50380	sequence128:12148..13263(-)	partial			WP_003911183.1	RND transporter MmpL2	91.6	35.0	83.2
MGA_5103	LOCUS_50440	sequence129:7599..8252(-)	partial			WP_003400005.1	type VII secretion system ESX-2 AAA family ATPase EccA2	84.3	29.6	86.9
MGA_5104	LOCUS_50450	sequence129:8256..8543(-)	partial			WP_003917259.1	hypothetical protein	100.0	31.5	85.3
MGA_5108	LOCUS_50490	sequence130:67..348(-)	partial			WP_003414501.1	ABC transporter substrate-binding protein	96.8	20.4	61.1
MGA_5114	LOCUS_50550	sequence130:5033..7849(-)	partial			WP_003899505.1	translation initiation factor IF-2	66.5	69.3	92.1
MGA_5120	LOCUS_50610	sequence131:1..637(+)	partial			WP_013228936.1	CoA transferase	83.9	44.1	31.5
MGA_5138	LOCUS_50790	sequence132:5711..7135(+)	partial			WP_003911027.1	PE family protein	24.5	26.4	58.6
MGA_5139	LOCUS_50800	sequence132:7178..8398(-)	partial			WP_004081285.1	DNA polymerase III subunit alpha	40.4	11.9	32.9
MGA_5140	LOCUS_50810	sequence132:9131..9877(+)	partial			WP_003899159.1	hypothetical protein	58.1	44.0	64.6
MGA_5152	LOCUS_50930	sequence133:11436..12017(+)	partial			WP_011727070.1	PPE family protein	99.5	36.7	61.7
MGA_5155	LOCUS_50950	sequence134:910..1776(-)	partial			WP_003916655.1	PPE domain-containing protein	48.6	3.8	49.3
MGA_5158	LOCUS_50980	sequence134:5059..5817(+)	frameshift		5075	WP_010950935.1	glycine betaine/carnitine/choline/L-proline ABC transporter substrate-binding protein ProX	48.8	38.4	44.7
MGA_5159	LOCUS_50990	sequence134:6291..6959(+)	partial			WP_015943650.1	hypothetical protein	34.2	70.4	46.1
MGA_5163	LOCUS_51030	sequence134:9543..10340(-)	internal_stop_codon	10404..10406(-),10344..10346(-)		WP_003899159.1	hypothetical protein	50.9	41.8	45.9
MGA_5165	LOCUS_51050	sequence134:10893..11849(-)	partial			WP_010886125.1	PE domain-containing protein	96.9	30.3	52.1
MGA_5167	LOCUS_51070	sequence135:1783..2385(-)	frameshift		2434	WP_013223253.1	trypsin-like peptidase domain-containing protein	88.5	65.3	38.5
MGA_5177	LOCUS_51170	sequence135:11560..11757(+)	frameshift		11450	WP_003413979.1	TerC/Alx family metal homeostasis membrane protein	89.2	14.6	91.4
MGA_5179	LOCUS_51190	sequence136:7919..8503(-)	frameshift,internal_stop_codon	7918..7920(-)	8706	WP_041180293.1	type I polyketide synthase	100.0	9.0	61.5
MGA_5180	LOCUS_51200	sequence136:8611..11511(-)	frameshift		8703	WP_115330673.1	type I polyketide synthase	96.2	31.2	29.6
MGA_5187	LOCUS_51270	sequence137:6399..6788(-)	frameshift		6679	WP_003401831.1	hypothetical protein	66.7	40.0	79.1
MGA_5202	LOCUS_51420	sequence138:8132..10294(+)	partial			WP_164929092.1	ATP-binding protein	91.5	54.3	40.3
MGA_5213	LOCUS_51520	sequence139:9235..10791(+)	partial			WP_003911027.1	PE family protein	22.8	26.9	60.2
MGA_5214	LOCUS_51530	sequence140:95..778(+)	partial			WP_010950605.1	PPE family protein	96.0	31.8	46.7
MGA_5215	LOCUS_51540	sequence140:844..4020(-)	partial			WP_014000186.1	PPE domain-containing protein	89.0	23.1	37.6
MGA_5223	LOCUS_51610	sequence141:1343..2002(+)	partial			WP_003899406.1	chloramphenicol phosphotransferase CPT family protein	73.5	71.6	81.4
MGA_5233	LOCUS_51710	sequence141:8497..9675(+)	frameshift		9576	WP_003413686.1	ACR3 family arsenite efflux transporter	93.1	72.5	87.7
MGA_5234	LOCUS_51720	sequence141:9587..10018(+)	frameshift		9579	WP_003413686.1	ACR3 family arsenite efflux transporter	90.2	25.9	84.5
MGA_5237	LOCUS_51750	sequence142:10304..10642(+)	frameshift		10233,10227,10221	WP_014000186.1	PPE domain-containing protein	93.8	3.0	77.1
MGA_5239	LOCUS_51760	sequence143:116..721(+)	partial			WP_003899285.1	phospholipase C	100.0	37.5	73.1
MGA_5250	LOCUS_51870	sequence143:10134..10790(+)	partial			WP_211695346.1	PPE family protein	82.1	5.7	52.5
MGA_5251	LOCUS_51880	sequence144:142..1224(+)	partial			WP_000029244.1	anaerobic sulfatase maturase	78.1	74.6	23.9
MGA_5254	LOCUS_51910	sequence144:2921..3463(-)	internal_stop_codon	3482..3484(-)		WP_003900438.1	acyl-CoA dehydrogenase	99.4	43.8	77.7
MGA_5255	LOCUS_51920	sequence144:3482..4150(-)	internal_stop_codon	3482..3484(-)		WP_003900438.1	acyl-CoA dehydrogenase	100.0	54.3	77.5
MGA_5259	LOCUS_51960	sequence144:9205..10107(+)	internal_stop_codon	9154..9156(+)		WP_003899091.1	epoxide hydrolase EphB	99.7	84.0	86.6
MGA_5282	LOCUS_52160	sequence146:7857..8303(+)	partial			WP_030862061.1	pyridoxamine 5'-phosphate oxidase family protein	86.5	41.7	35.7
MGA_5287	LOCUS_52200	sequence147:1520..2896(-)	frameshift,internal_stop_codon	3145..3147(-),2796..2798(-)	1792,2753,1989,2823,2955,3153,2258,2903,2201,1825,1701,3111,2089,3117,3120,1788,1789	WP_010950436.1	PE family protein	12.7	7.3	60.3
MGA_5288	LOCUS_52210	sequence147:2797..3687(-)	frameshift		3117,3141	WP_010886133.1	PE family protein	39.9	23.7	54.2
MGA_5302	LOCUS_52330	sequence148:9703..10131(-)	partial			WP_003419293.1	3-oxo-23,24-bisnorchol-4,17(20)-dien-22-oyl-CoA hydratase subunit alpha ChsH2	90.8	39.9	45.7
MGA_5303	LOCUS_52340	sequence149:200..1969(+)	partial			WP_010950464.1	PE family protein	20.0	19.4	55.9
MGA_5304	LOCUS_52350	sequence149:2045..3745(+)	partial			WP_010950464.1	PE family protein	21.4	19.9	60.3
MGA_5305	LOCUS_52360	sequence149:3864..4925(+)	partial			WP_099318959.1	PE family protein	37.1	28.6	56.5
MGA_5310	LOCUS_52410	sequence149:9480..9752(-)	partial			WP_003404838.1	chorismate mutase	86.7	74.3	75.6
MGA_5314	LOCUS_52440	sequence150:2420..3499(-)	partial			WP_005111333.1	ethanolamine permease	81.1	55.4	53.7
MGA_5322	LOCUS_52520	sequence151:1288..1845(-)	partial			WP_010974487.1	flavin reductase	91.4	49.2	34.9
MGA_5323	LOCUS_52530	sequence151:1865..5698(-)	partial			WP_011267825.1	syringopeptin non-ribosomal peptide synthetase SypC	90.1	8.5	34.7
MGA_5324	LOCUS_52540	sequence151:5653..7665(-)	partial			WP_010919665.1	acyl-CoA dehydrogenase family protein	40.1	71.7	32.1
MGA_5329	LOCUS_52580	sequence152:2088..2894(-)	frameshift		2105,2922	WP_003902238.1	apolipoprotein N-acyltransferase	95.5	29.3	82.8
MGA_5330	LOCUS_52590	sequence152:2920..5034(-)	frameshift		2922	WP_003902238.1	apolipoprotein N-acyltransferase	85.5	66.1	73.1
MGA_5336	LOCUS_52650	sequence153:332..2002(-)	partial			WP_010950570.1	PE domain-containing protein	64.2	33.8	40.3
MGA_5337	LOCUS_52660	sequence153:2296..4209(-)	partial			WP_003420809.1	PE family protein	57.0	76.6	37.2
MGA_5344	LOCUS_52720	sequence154:1479..1658(+)	internal_stop_codon	1656..1658(+)		WP_011726768.1	IS1380-like element ISMsm3 family transposase	83.1	10.5	79.6
MGA_5348	LOCUS_52760	sequence154:4026..4988(-)	partial			WP_011731079.1	adenylate/guanylate cyclase domain-containing protein	94.4	52.0	34.0
MGA_5354	LOCUS_52820	sequence155:1895..2698(+)	frameshift		1886	WP_011267273.1	NADP-dependent oxidoreductase	98.9	78.2	48.9
MGA_5357	LOCUS_52850	sequence155:4065..4334(+)	partial			WP_002356194.1	elongation factor Tu	89.9	21.3	52.4
MGA_5364	LOCUS_52910	sequence156:269..730(+)	internal_stop_codon	728..730(+)		WP_003406219.1	PucR family transcriptional regulator	100.0	36.3	78.4
MGA_5365	LOCUS_52920	sequence156:731..1534(+)	internal_stop_codon	728..730(+)		WP_003406219.1	PucR family transcriptional regulator	100.0	63.4	73.8
MGA_5369	LOCUS_52960	sequence156:4918..5184(-)	frameshift		5239	WP_004527142.1	aldehyde dehydrogenase family protein	95.5	17.6	56.5
MGA_5370	LOCUS_52970	sequence156:5093..6385(-)	frameshift		5242	WP_003403919.1	aldehyde dehydrogenase	84.9	75.5	43.2
MGA_5371	LOCUS_52980	sequence156:6665..7165(+)	partial			WP_013224382.1	OB-fold domain-containing protein	85.5	45.0	47.2
MGA_5374	LOCUS_53010	sequence157:3336..4067(-)	partial			WP_235624115.1	hypothetical protein	67.1	81.2	55.4
MGA_5379	LOCUS_53060	sequence158:406..1146(+)	frameshift,internal_stop_codon	1133..1135(+)	747,708,1117	WP_003399995.1	type VII secretion system ESX-1 target EspB	94.3	50.7	44.4
MGA_5388	LOCUS_53140	sequence159:8..3457(-)	partial			WP_163682492.1	non-ribosomal peptide synthetase	91.8	18.7	47.8
MGA_5389	LOCUS_53150	sequence159:3454..5631(-)	internal_stop_codon	5668..5670(-)		WP_206334115.1	type I polyketide synthase	79.3	11.5	40.5
MGA_5390	LOCUS_53160	sequence159:5668..6612(-)	internal_stop_codon	5668..5670(-)		WP_067456433.1	type I polyketide synthase	100.0	8.2	52.8
MGA_5392	LOCUS_53170	sequence160:186..359(+)	internal_stop_codon	357..359(+)		WP_162139576.1	hypothetical protein	94.7	49.5	61.1
MGA_5393	LOCUS_53180	sequence160:372..521(+)	internal_stop_codon	357..359(+)		WP_003896239.1	hypothetical protein	93.9	40.0	76.1
MGA_5394	LOCUS_53190	sequence160:525..1328(+)	frameshift		1196	WP_011730128.1	amidohydrolase family protein	83.1	54.7	89.2
MGA_5398	LOCUS_53230	sequence160:4240..4500(-)	internal_stop_codon	4540..4542(-)		WP_011727675.1	SulP family inorganic anion transporter	98.8	17.0	74.1
MGA_5399	LOCUS_53240	sequence160:4540..5775(-)	internal_stop_codon	4540..4542(-)		WP_011727675.1	SulP family inorganic anion transporter	98.5	80.4	72.3
MGA_5400	LOCUS_53250	sequence160:6076..6534(-)	partial			WP_011730097.1	acyl-CoA dehydrogenase family protein	100.0	38.9	61.2
MGA_5403	LOCUS_53280	sequence161:1519..2220(-)	frameshift		2225	WP_003898734.1	hypothetical protein	98.7	80.8	77.1
MGA_5408	LOCUS_53330	sequence161:5836..5955(-)	partial			WP_003405884.1	alpha/beta hydrolase	87.2	11.3	85.3
MGA_5411	LOCUS_53350	sequence162:3298..4227(+)	partial			WP_010950881.1	PE family protein	48.2	19.1	48.3
MGA_5412	LOCUS_53360	sequence162:4404..4613(+)	partial			WP_005065012.1	CbtB-domain containing protein	63.8	64.7	72.7
MGA_5417	LOCUS_53410	sequence163:1609..1893(+)	internal_stop_codon	1891..1893(+)		WP_011729784.1	MMPL family transporter	84.0	8.2	60.8
MGA_5427	LOCUS_53510	sequence164:5545..5850(-)	partial			WP_003904477.1	IS110-like element IS1547 family transposase	79.2	21.7	47.5
MGA_5433	LOCUS_53570	sequence165:5104..5706(+)	partial			WP_010950550.1	dTDP-4-amino-4,6-dideoxygalactose transaminase	97.0	50.8	85.1
MGA_5434	LOCUS_53580	sequence166:94..744(+)	partial			WP_003408181.1	type III polyketide synthase	97.2	58.1	53.3
MGA_5439	LOCUS_53620	sequence167:64..633(-)	partial			WP_011085964.1	NAD(P)/FAD-dependent oxidoreductase	91.0	27.4	33.3
MGA_5442	LOCUS_53650	sequence167:2414..3076(-)	frameshift		2482,2476	WP_003904712.1	PE family protein	53.6	22.1	70.3
MGA_5451	LOCUS_53720	sequence169:144..626(+)	partial			WP_011727224.1	MPT63 family protein	81.9	36.5	42.0
MGA_5458	LOCUS_53780	sequence171:416..1342(+)	frameshift		1336,1330,1339	WP_009938544.1	PE family protein	39.0	15.4	64.2
MGA_5463	LOCUS_53820	sequence172:65..397(-)	partial			WP_164493626.1	hypothetical protein	94.5	54.0	40.0
MGA_5471	LOCUS_53890	sequence174:237..575(-)	frameshift		609	WP_003409509.1	hypothetical protein	99.1	82.2	82.0
MGA_5473	LOCUS_53910	sequence174:2716..3420(+)	partial			WP_011729088.1	alcohol dehydrogenase catalytic domain-containing protein	99.1	68.9	67.4
MGA_5481	LOCUS_53980	sequence176:1406..3469(-)	partial			WP_003905649.1	PE family protein	19.7	21.2	60.0
MGA_5487	LOCUS_54030	sequence178:1510..3324(-)	partial			WP_003414835.1	phthiocerol type I polyketide synthase PpsB	95.4	37.1	56.3
MGA_5491	LOCUS_54050	sequence180:2821..>3431(-)	partial			WP_003899509.1	cobyrinate a,c-diamide synthase	97.0	42.9	74.5
MGA_5492	LOCUS_54060	sequence181:1..541(+)	frameshift		517	WP_003899092.1	3,4-dihydroxy-2-butanone-4-phosphate synthase	95.0	48.2	72.9
MGA_5493	LOCUS_54070	sequence181:573..968(+)	frameshift		517	WP_003899092.1	3,4-dihydroxy-2-butanone-4-phosphate synthase	84.0	30.9	78.2
MGA_5499	LOCUS_54130	sequence183:1620..1946(-)	frameshift		1935	WP_009935184.1	polyprenyl synthetase family protein	95.4	29.4	58.3
MGA_5500	LOCUS_54140	sequence183:1897..2526(-)	frameshift		1935	WP_003900678.1	polyprenyl synthetase family protein	95.7	57.4	59.7
MGA_5501	LOCUS_54150	sequence184:67..753(-)	partial			WP_003899905.1	serine/threonine protein kinase PknK	76.8	15.9	56.2
MGA_5502	LOCUS_54160	sequence184:1658..3079(+)	internal_stop_codon	1631..1633(+)		WP_010950872.1	PPE family protein	97.7	30.3	39.2
MGA_5503	LOCUS_54170	sequence185:110..676(+)	partial			WP_010950550.1	dTDP-4-amino-4,6-dideoxygalactose transaminase	100.0	49.2	81.9
MGA_5506	LOCUS_54200	sequence185:2358..2786(-)	partial			WP_003407616.1	hypothetical protein	100.0	46.5	65.5
MGA_5511	LOCUS_54240	sequence187:115..939(+)	partial			WP_013222574.1	LLM class flavin-dependent oxidoreductase	55.1	46.1	32.9
MGA_5516	LOCUS_54290	sequence189:398..835(-)	partial			WP_003404757.1	IS256-like element IS1554 family transposase	89.0	29.4	71.3
MGA_5523	LOCUS_54360	sequence192:92..1927(-)	partial			WP_099318959.1	PE family protein	20.9	27.7	53.1
MGA_5526	LOCUS_54390	sequence193:1609..2049(+)	partial			WP_003898733.1	hypothetical protein	93.8	59.1	78.1
MGA_5529	LOCUS_54410	sequence194:1559..>2175(-)	partial			WP_005085810.1	primary-amine oxidase	85.8	27.1	77.1
MGA_5530	LOCUS_54420	sequence195:250..900(+)	partial			WP_003899661.1	PPE domain-containing protein	72.7	45.1	35.2
MGA_5531	LOCUS_54430	sequence195:1215..2021(-)	partial			WP_003906797.1	multidrug resistance protein Stp	93.3	46.6	85.6
MGA_5535	LOCUS_54460	sequence197:169..921(-)	frameshift		928	WP_011730613.1	diiron oxygenase	100.0	60.9	73.6
MGA_5537	LOCUS_54480	sequence198:412..567(+)	frameshift		427	WP_085976166.1	IS3 family transposase	74.5	10.0	86.8
MGA_5542	LOCUS_54500	sequence202:88..525(+)	frameshift		492	WP_003410136.1	hypothetical protein	95.2	47.3	48.9
MGA_5550	LOCUS_54550	sequence205:341..841(+)	partial			WP_193489449.1	integrase core domain-containing protein	56.6	52.2	76.6
MGA_5551	LOCUS_54560	sequence205:977..1351(+)	partial			WP_011142671.1	IS6 family transposase	39.5	20.8	69.4
MGA_5559	LOCUS_54580	sequence210:325..663(-)	partial			WP_003898974.1	ABC transporter permease	45.5	22.6	72.5
MGA_5562	LOCUS_54590	sequence213:63..416(-)	partial			WP_015704137.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	75.2	22.0	41.1
MGA_5568	LOCUS_54610	sequence217:1..918(+)	partial			WP_010886120.1	PPE family protein	82.3	36.7	51.4
MGA_5580	LOCUS_54630	sequence228:60..>578(-)	partial			WP_003414501.1	ABC transporter substrate-binding protein	95.9	37.8	80.0
MGA_5586	LOCUS_54640	sequence233:86..259(+)	internal_stop_codon	257..259(+)		WP_003410042.1	NAD(P)/FAD-dependent oxidoreductase	71.9	7.6	82.9
