{ "tc_result": [ { "organism_name": "Burkholderia cepacia", "strain": "strain=NBRC 14074", "accession": "GCA_001528845.1", "taxid": 292, "species_taxid": 292, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 2766, "total_fragments": 2772, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Burkholderia cepacia", "strain": "strain=UCB 717", "accession": "GCA_001411495.1", "taxid": 292, "species_taxid": 292, "relation_to_type": "type", "validated": true, "ani": 99.9995, "matched_fragments": 2772, "total_fragments": 2772, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Burkholderia cepacia", "strain": "strain=ATCC 25416", "accession": "GCA_006094315.1", "taxid": 292, "species_taxid": 292, "relation_to_type": "type", "validated": true, "ani": 99.9991, "matched_fragments": 2768, "total_fragments": 2772, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Burkholderia cepacia", "strain": "strain=ATCC 25416", "accession": "GCA_003546465.1", "taxid": 292, "species_taxid": 292, "relation_to_type": "type", "validated": true, "ani": 99.9956, "matched_fragments": 2770, "total_fragments": 2772, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Burkholderia cepacia", "strain": "strain=ATCC 25416", "accession": "GCA_000473485.1", "taxid": 292, "species_taxid": 292, "relation_to_type": "type", "validated": true, "ani": 99.9955, "matched_fragments": 2770, "total_fragments": 2772, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Burkholderia anthina", "strain": "strain=DSM 16086", "accession": "GCA_016836725.1", "taxid": 179879, "species_taxid": 179879, "relation_to_type": "suspected-type", "validated": true, "ani": 90.6777, "matched_fragments": 1873, "total_fragments": 2772, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia ubonensis", "strain": "strain=LMG 20358", "accession": "GCA_902833085.1", "taxid": 101571, "species_taxid": 101571, "relation_to_type": "type", "validated": true, "ani": 88.6164, "matched_fragments": 1813, "total_fragments": 2772, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia ubonensis", "strain": "", "accession": "GCA_902499185.1", "taxid": 101571, "species_taxid": 101571, "relation_to_type": "type", "validated": true, "ani": 88.6146, "matched_fragments": 1758, "total_fragments": 2772, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia perseverans", "strain": "strain=INN12", "accession": "GCA_022870505.1", "taxid": 2615214, "species_taxid": 2615214, "relation_to_type": "type", "validated": true, "ani": 83.3213, "matched_fragments": 1399, "total_fragments": 2772, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraburkholderia pallida", "strain": "strain=7MH5", "accession": "GCA_004524855.1", "taxid": 2547399, "species_taxid": 2547399, "relation_to_type": "type", "validated": true, "ani": 81.082, "matched_fragments": 1258, "total_fragments": 2772, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_001411495.1", "gtdb_species": "s__Burkholderia cepacia", "ani": 99.9995, "matched_fragments": 2772, "total_fragments": 2772, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.84", "min_intra_species_ani": "96.33", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.79", "num_clustered_genomes": 182, "status": "conclusive" }, { "accession": "GCF_011605345.1", "gtdb_species": "s__Burkholderia sp011605345", "ani": 94.6979, "matched_fragments": 2284, "total_fragments": 2772, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001718835.1", "gtdb_species": "s__Burkholderia cepacia_F", "ani": 94.4827, "matched_fragments": 1822, "total_fragments": 2772, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_902499335.1", "gtdb_species": "s__Burkholderia lata_B", "ani": 93.7352, "matched_fragments": 2222, "total_fragments": 2772, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.27", "min_intra_species_ani": "95.15", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.83", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_002099195.1", "gtdb_species": "s__Burkholderia puraquae", "ani": 93.6615, "matched_fragments": 2198, "total_fragments": 2772, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.50", "min_intra_species_ani": "95.00", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.80", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000012945.1", "gtdb_species": "s__Burkholderia lata", "ani": 93.654, "matched_fragments": 2200, "total_fragments": 2772, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.57", "min_intra_species_ani": "95.30", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.82", "num_clustered_genomes": 11, "status": "-" }, { "accession": "GCF_902499175.1", "gtdb_species": "s__Burkholderia aenigmatica", "ani": 93.5923, "matched_fragments": 2076, "total_fragments": 2772, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.89", "min_intra_species_ani": "95.59", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.80", "num_clustered_genomes": 12, "status": "-" }, { "accession": "GCF_902833045.1", "gtdb_species": "s__Burkholderia sp902833045", "ani": 93.3677, "matched_fragments": 2077, "total_fragments": 2772, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.81", "min_intra_species_ani": "96.81", "mean_intra_species_af": "0.81", "min_intra_species_af": "0.81", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000987075.1", "gtdb_species": "s__Burkholderia contaminans", "ani": 93.2059, "matched_fragments": 2180, "total_fragments": 2772, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.97", "min_intra_species_ani": "95.20", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.82", "num_clustered_genomes": 86, "status": "-" }, { "accession": "GCF_902832845.1", "gtdb_species": "s__Burkholderia metallica", "ani": 92.9119, "matched_fragments": 2071, "total_fragments": 2772, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.19", "min_intra_species_ani": "98.00", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.86", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_001028665.1", "gtdb_species": "s__Burkholderia pyrrocinia", "ani": 92.7815, "matched_fragments": 2112, "total_fragments": 2772, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.68", "min_intra_species_ani": "95.03", "mean_intra_species_af": "0.81", "min_intra_species_af": "0.77", "num_clustered_genomes": 21, "status": "-" }, { "accession": "GCF_902499125.1", "gtdb_species": "s__Burkholderia arboris", "ani": 92.4186, "matched_fragments": 2146, "total_fragments": 2772, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.82", "min_intra_species_ani": "96.20", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.91", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_016899425.1", "gtdb_species": "s__Burkholderia sp002223185", "ani": 91.7137, "matched_fragments": 2029, "total_fragments": 2772, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.86", "min_intra_species_ani": "95.32", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.84", "num_clustered_genomes": 68, "status": "-" }, { "accession": "GCF_000292915.1", "gtdb_species": "s__Burkholderia cepacia_D", "ani": 91.148, "matched_fragments": 1761, "total_fragments": 2772, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003853415.1", "gtdb_species": "s__Burkholderia sp003853415", "ani": 90.8477, "matched_fragments": 1908, "total_fragments": 2772, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.32", "min_intra_species_ani": "99.32", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 2, "status": "-" } ] }