# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_64	LOCUS_00630	sequence01:70110..70256(+)	partial			WP_000009238.1	SAS049 family protein	72.9	72.9	100.0
MGA_111	LOCUS_01100	sequence01:117924..118100(+)	partial			WP_000048060.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_200	LOCUS_01990	sequence01:199524..199730(+)	partial			WP_001033761.1	hypothetical protein	92.6	8.8	63.5
MGA_280	LOCUS_02790	sequence01:313651..314043(+)	frameshift		314016	WP_126475239.1	IS1182 family transposase	67.7	16.1	87.5
MGA_281	LOCUS_02800	sequence01:314061..314255(+)	frameshift		314016	WP_126475239.1	IS1182 family transposase	100.0	11.7	98.4
MGA_297	LOCUS_02960	sequence01:329877..330173(-)	partial			WP_126475239.1	IS1182 family transposase	99.0	17.8	94.8
MGA_371	LOCUS_03700	sequence01:411397..411738(-)	partial			WP_002485350.1	minor capsid protein	100.0	25.2	71.7
MGA_373	LOCUS_03720	sequence01:411993..412283(-)	internal_stop_codon	412374..412376(-),412293..412295(-)		WP_002485350.1	minor capsid protein	94.8	22.8	45.1
MGA_377	LOCUS_03760	sequence01:413757..414341(-)	partial			WP_002485350.1	minor capsid protein	68.6	35.5	56.0
MGA_449	LOCUS_04480	sequence01:499564..500922(+)	partial			WP_000915238.1	lipoteichoic acid-specific glycosyltransferase YfhO	100.0	52.1	93.4
MGA_477	LOCUS_04760	sequence01:529717..529920(+)	partial			WP_001548522.1	TM2 domain-containing protein	100.0	72.8	100.0
MGA_496	LOCUS_04950	sequence01:551832..552026(+)	partial			WP_126475239.1	IS1182 family transposase	81.2	9.5	98.1
MGA_535	LOCUS_05340	sequence01:590472..590798(-)	internal_stop_codon	590472..590474(-)		WP_000584398.1	hypothetical protein	91.7	58.9	87.9
MGA_612	LOCUS_06110	sequence01:668776..668910(+)	partial			WP_000064214.1	glycopeptide resistance-associated protein GraF	54.5	54.5	100.0
MGA_650	LOCUS_06490	sequence01:712069..712284(+)	partial			WP_001788574.1	NINE protein	100.0	74.0	97.2
MGA_816	LOCUS_08150	sequence01:873476..874246(-)	partial			WP_000190248.1	DnaD domain protein	38.3	39.1	43.9
MGA_829	LOCUS_08280	sequence01:878822..879589(-)	partial			WP_001148557.1	phage antirepressor KilAC domain-containing protein	73.3	72.2	88.2
MGA_871	LOCUS_08700	sequence01:911172..911291(-)	frameshift		911177	WP_000791702.1	von Willebrand factor binding protein Vwb	94.9	7.4	97.3
MGA_872	LOCUS_08710	sequence01:911512..914259(-)	partial			WP_001056195.1	MSCRAMM family adhesin clumping factor ClfA	61.1	56.5	82.6
MGA_878	LOCUS_08770	sequence01:917983..918189(-)	partial			WP_001788408.1	hypothetical protein	100.0	73.1	98.5
MGA_905	LOCUS_09040	sequence01:949909..950139(-)	internal_stop_codon	950227..950229(-)		WP_000538141.1	HD domain-containing protein	100.0	35.2	98.7
MGA_906	LOCUS_09050	sequence01:950227..950559(-)	internal_stop_codon	950227..950229(-)		WP_000538141.1	HD domain-containing protein	100.0	50.9	97.3
MGA_970	LOCUS_09690	sequence01:1020366..1020650(+)	partial			WP_001801730.1	hypothetical protein	90.4	73.9	100.0
MGA_1061	LOCUS_10600	sequence01:1111449..1111694(-)	partial			WP_000020814.1	T7SS effector LXG polymorphic toxin	66.7	11.6	57.4
MGA_1075	LOCUS_10740	sequence01:1123084..1123425(-)	partial			WP_000798967.1	DUF1450 domain-containing protein	69.0	69.0	100.0
MGA_1145	LOCUS_11430	sequence02:46675..46893(-)	frameshift		47017,46734	WP_001557596.1	tandem-type lipoprotein	98.6	26.2	78.9
MGA_1146	LOCUS_11440	sequence02:47009..47482(-)	frameshift		47017,46734	WP_001557596.1	tandem-type lipoprotein	88.5	51.9	83.5
MGA_1158	LOCUS_11560	sequence02:59785..60480(-)	partial			WP_000705657.1	superantigen-like protein SSL4	92.2	72.6	42.3
MGA_1191	LOCUS_11890	sequence02:91067..91225(+)	frameshift		90945,91203,91398,91038,91311	WP_047210621.1	site-specific integrase	88.5	11.3	84.8
MGA_1192	LOCUS_11900	sequence02:91303..91614(+)	frameshift		91205,91037,91310,91406	WP_047210621.1	site-specific integrase	75.7	19.2	66.7
MGA_1220	LOCUS_12180	sequence02:117547..117843(-)	partial			WP_000093025.1	hypothetical protein	100.0	72.6	98.0
MGA_1270	LOCUS_12680	sequence02:165554..165853(-)	frameshift		165905	WP_000141941.1	TIGR01741 family protein	100.0	59.6	81.8
MGA_1271	LOCUS_12690	sequence02:165897..166049(-)	frameshift		165905	WP_000141941.1	TIGR01741 family protein	96.0	28.9	87.5
MGA_1299	LOCUS_12970	sequence02:194338..194565(-)	partial			WP_126475239.1	IS1182 family transposase	85.3	11.7	98.4
MGA_1366	LOCUS_13640	sequence02:275691..276650(-)	partial			WP_001796914.1	ABC transporter permease	100.0	64.8	91.5
MGA_1417	LOCUS_14150	sequence02:343032..343253(-)	frameshift,internal_stop_codon	343466..343468(-)	343261	WP_000093392.1	IS200/IS605 family transposase	87.7	39.8	98.4
MGA_1419	LOCUS_14170	sequence02:344277..344567(-)	frameshift		344623	WP_011117535.1	replication initiation factor domain-containing protein	99.0	31.0	63.2
MGA_1420	LOCUS_14180	sequence02:344552..345037(-)	frameshift		344623	WP_011117535.1	replication initiation factor domain-containing protein	89.4	49.0	73.3
MGA_1421	LOCUS_14190	sequence02:345410..345604(-)	partial			WP_000469833.1	XRE family transcriptional regulator	100.0	16.4	98.4
MGA_1442	LOCUS_14400	sequence02:366876..367217(-)	partial			WP_000414629.1	MFS transporter	100.0	54.3	98.2
MGA_1461	LOCUS_14590	sequence02:388538..389653(-)	internal_stop_codon	389681..389683(-)		WP_003244019.1	PLP-dependent aminotransferase family protein	100.0	77.0	37.2
MGA_1462	LOCUS_14600	sequence02:389681..389935(-)	partial			WP_000577184.1	GntR family transcriptional regulator	94.0	34.9	40.7
MGA_1488	LOCUS_14860	sequence02:421295..421747(+)	partial			WP_001827266.1	tRNA-dihydrouridine synthase	100.0	48.4	96.0
MGA_1514	LOCUS_15120	sequence02:458506..458643(+)	partial			WP_000240855.1	50S ribosomal protein L34	60.0	60.0	100.0
MGA_1526	LOCUS_15240	sequence02:467219..467569(-)	partial			WP_002305939.1	IS30 family transposase	89.7	32.6	70.2
MGA_1528	LOCUS_15260	sequence02:468205..468615(-)	frameshift		468234	WP_002305939.1	IS30 family transposase	97.1	41.4	67.4
MGA_1558	LOCUS_15560	sequence02:496094..496852(+)	frameshift		496837	WP_000592610.1	imidazole glycerol phosphate synthase subunit HisF	98.4	53.7	100.0
MGA_1559	LOCUS_15570	sequence02:496849..497481(+)	frameshift		496834	WP_000592610.1	imidazole glycerol phosphate synthase subunit HisF	100.0	45.5	100.0
MGA_1560	LOCUS_15580	sequence02:497641..497853(+)	partial			WP_000837587.1	hypothetical protein	64.3	76.3	95.6
MGA_1578	LOCUS_15760	sequence02:515205..515729(-)	internal_stop_codon	515205..515207(-),515739..515741(-)		WP_002485492.1	hypothetical protein	98.3	42.4	39.6
MGA_1579	LOCUS_15770	sequence02:515739..516017(-)	internal_stop_codon	516021..516023(-),516105..516107(-),516195..516197(-),515739..515741(-)		WP_002485492.1	hypothetical protein	95.7	19.6	41.7
MGA_1580	LOCUS_15780	sequence02:516195..516995(-)	internal_stop_codon	516021..516023(-),517275..517277(-),517095..517097(-),517197..517199(-),516105..516107(-),517005..517007(-),516195..516197(-)		WP_002485492.1	hypothetical protein	99.2	50.8	40.7
MGA_1581	LOCUS_15790	sequence02:517275..518483(-)	internal_stop_codon	517197..517199(-),517275..517277(-),517095..517097(-),518607..518609(-)		WP_002485492.1	hypothetical protein	99.0	73.8	38.0
MGA_1582	LOCUS_15800	sequence02:518607..519371(-)	internal_stop_codon	519459..519461(-),519465..519467(-),518607..518609(-),519522..519524(-)		WP_002485492.1	hypothetical protein	63.0	29.8	34.1
MGA_1583	LOCUS_15810	sequence02:519352..519723(+)	partial			WP_000044547.1	serine-rich repeat glycoprotein adhesin SasA	55.3	3.0	92.6
MGA_1637	LOCUS_16330	sequence03:29631..30767(-)	partial			WP_003549016.1	ATP-dependent Clp protease ATP-binding subunit	88.6	46.2	23.4
MGA_1639	LOCUS_16350	sequence03:31572..31865(-)	frameshift		31864	WP_010939452.1	DEAD/DEAH box helicase family protein	96.9	6.1	47.4
MGA_1640	LOCUS_16360	sequence03:31862..32959(-)	frameshift		31864,33188,33062	WP_011202675.1	DEAD/DEAH box helicase family protein	100.0	24.7	33.1
MGA_1735	LOCUS_17300	sequence03:112768..113082(+)	frameshift		112965	WP_126475239.1	IS1182 family transposase	81.7	14.7	72.9
MGA_1782	LOCUS_17770	sequence03:159687..160043(+)	partial			WP_126475239.1	IS1182 family transposase	87.3	18.9	94.2
MGA_1811	LOCUS_18060	sequence03:191057..191695(+)	internal_stop_codon	191693..191695(+)		WP_000276759.1	DUF2268 domain-containing protein	100.0	69.7	99.1
MGA_1812	LOCUS_18070	sequence03:191765..191971(+)	internal_stop_codon	191693..191695(+)		WP_000276759.1	DUF2268 domain-containing protein	100.0	22.4	100.0
MGA_1910	LOCUS_19050	sequence03:292681..292962(-)	frameshift		292976	WP_001044255.1	membrane protein	100.0	21.1	96.8
MGA_1911	LOCUS_19060	sequence03:292893..294005(-)	frameshift		292973	WP_001044255.1	membrane protein	93.0	78.0	87.5
MGA_1919	LOCUS_19140	sequence03:302268..302438(-)	partial			WP_001795286.1	hypothetical protein	100.0	72.7	92.9
MGA_1921	LOCUS_19160	sequence03:304059..>304808(-)	partial			WP_011082576.1	accumulation-associated protein Aap	86.3	15.0	55.0
MGA_1939	LOCUS_19330	sequence04:23741..24205(-)	partial			WP_011948695.1	MarR family transcriptional regulator	85.1	73.0	38.2
MGA_2001	LOCUS_19950	sequence04:90956..91276(+)	partial			WP_001795157.1	hypothetical protein	100.0	63.9	99.1
MGA_2041	LOCUS_20350	sequence04:128941..129627(-)	partial			WP_003894962.1	MBL fold metallo-hydrolase	61.4	67.3	30.8
MGA_2070	LOCUS_20630	sequence05:18644..18868(-)	frameshift		18696,18891	WP_126475239.1	IS1182 family transposase	78.4	12.3	82.1
MGA_2071	LOCUS_20640	sequence05:18865..19356(-)	frameshift		19304,18890,18695	WP_126475239.1	IS1182 family transposase	84.7	25.3	93.5
MGA_2093	LOCUS_20860	sequence05:37240..38064(+)	frameshift		38061	WP_126475239.1	IS1182 family transposase	100.0	50.3	96.0
MGA_2094	LOCUS_20870	sequence05:38097..38705(+)	frameshift		38061	WP_126475239.1	IS1182 family transposase	100.0	37.1	97.0
MGA_2116	LOCUS_21090	sequence05:55739..55882(-)	frameshift,internal_stop_codon	55739..55741(-)	55729	WP_000159787.1	transposase	89.4	46.7	76.2
MGA_2117	LOCUS_21100	sequence05:56752..57129(-)	partial			WP_010989411.1	DUF1433 domain-containing protein	74.4	66.9	44.1
MGA_2118	LOCUS_21110	sequence05:57649..61761(-)	partial			WP_011391500.1	hypothetical protein	48.8	43.2	26.4
MGA_2131	LOCUS_21240	sequence05:74809..76182(-)	partial			WP_000699969.1	S8 family serine peptidase	69.1	55.1	38.9
MGA_2132	LOCUS_21250	sequence05:76192..76710(-)	partial			WP_010880496.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	77.9	35.3	38.0
MGA_2133	LOCUS_21260	sequence05:76726..77970(-)	partial			WP_011026975.1	lanthionine synthetase C family protein	75.1	69.1	24.1
MGA_2263	LOCUS_22550	sequence06:93325..93672(+)	frameshift		93540,93263	WP_000179343.1	tyrosine-type recombinase/integrase	100.0	29.7	54.2
MGA_2267	LOCUS_22590	sequence06:96813..98072(-)	partial			WP_000120296.1	SdrH family protein	53.9	54.5	95.1
MGA_2285	LOCUS_22760	sequence07:24318..24527(+)	frameshift,internal_stop_codon	24525..24527(+)	24346	WP_010925589.1	recombinase family protein	84.1	53.6	73.3
MGA_2323	LOCUS_23140	sequence07:62882..63235(+)	partial			WP_001801792.1	ATP synthase subunit I	83.8	65.3	98.0
MGA_2351	LOCUS_23420	sequence08:15378..16418(+)	partial			WP_000193903.1	hypothetical protein	84.1	62.4	73.2
MGA_2359	LOCUS_23500	sequence08:28868..29068(-)	frameshift		29178	WP_000184370.1	transglycosylase domain-containing protein	100.0	21.9	98.5
MGA_2360	LOCUS_23510	sequence08:29017..29772(-)	frameshift		29178	WP_000184370.1	transglycosylase domain-containing protein	78.9	65.8	94.9
MGA_2392	LOCUS_23830	sequence08:68674..69501(+)	frameshift,internal_stop_codon	69475..69477(+)	69474	WP_126475239.1	IS1182 family transposase	95.3	48.1	94.3
MGA_2395	LOCUS_23840	sequence09:3870..6857(-)	partial			WP_001060462.1	MSCRAMM family adhesin SdrC	72.1	75.2	94.7
MGA_2506	LOCUS_24950	sequence11:31902..>32489(-)	partial			WP_001108483.1	hydroxyethylthiazole kinase	100.0	74.1	95.4
MGA_2533	LOCUS_25210	sequence13:269..589(-)	frameshift,internal_stop_codon	268..270(-)	717	WP_126475239.1	IS1182 family transposase	100.0	19.4	100.0
MGA_2534	LOCUS_25220	sequence13:586..1386(-)	frameshift		717	WP_126475239.1	IS1182 family transposase	95.1	47.7	80.0
MGA_2556	LOCUS_25400	sequence18:218..1321(+)	frameshift,internal_stop_codon	1320..1322(+)	206	WP_001557163.1	ISL3-like element IS1181 family transposase	100.0	83.6	97.3
MGA_2559	LOCUS_25410	sequence20:55..612(+)	partial			WP_011731036.1	pantoate--beta-alanine ligase	73.5	43.3	66.2
