{ "type": "genome", "identifier": "GCF_001552095.1", "organism": "Arthrobacter woluwensis NBRC 107840", "title": "Arthrobacter woluwensis NBRC 107840", "description": "na", "data type": "Genome sequencing and assembly", "organization": "National Institute of Technology and Evaluation", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001552095.1", "bioproject": "PRJNA224116", "biosample": "SAMD00046502", "wgs_master": "BCQN00000000.1", "refseq_category": "na", "taxid": "1216974", "species_taxid": "156980", "organism_name": "Arthrobacter woluwensis NBRC 107840", "infraspecific_name": "strain=NBRC 107840", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/02/03", "asm_name": "ASM155209v1", "asm_submitter": "National Institute of Technology and Evaluation", "gbrs_paired_asm": "GCA_001552095.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/552/095/GCF_001552095.1_ASM155209v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3625922", "genome_size_ungapped": "3625922", "gc_percent": "68.500000", "replicon_count": "0", "scaffold_count": "36", "contig_count": "36", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001552095.1-RS_2024_09_02", "annotation_date": "2024-09-02", "total_gene_count": "3359", "protein_coding_gene_count": "3280", "non_coding_gene_count": "61", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-02-03", "dateModified": "2016-02-03", "datePublished": "2016-02-03", "_annotation": { "sample_count": 1, "sample_organism": [ "Arthrobacter woluwensis NBRC 107840" ], "sample_taxid": [ "1216974" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "missing" ], "sample_host_location_id": [], "data_size": "0.991 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3625922", "Number of Sequences": "36", "Longest Sequences (bp)": "925749", "N50 (bp)": "394542", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "68.5", "Number of CDSs": "3328", "Average Protein Length": "325.5", "Coding Ratio (%)": "89.6", "Number of rRNAs": "3", "Number of tRNAs": "55", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Arthrobacter woluwensis", "strain": "strain=NBRC 107840", "accession": "GCA_001552095.1", "taxid": 156980, "species_taxid": 156980, 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1189, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter mobilis", "strain": "strain=E918", "accession": "GCA_012395835.1", "taxid": 2724944, "species_taxid": 2724944, "relation_to_type": "type", "validated": true, "ani": 78.8169, "matched_fragments": 341, "total_fragments": 1189, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paenarthrobacter nicotinovorans", "strain": "strain=DSM 420", "accession": "GCA_017876445.1", "taxid": 29320, "species_taxid": 29320, "relation_to_type": "suspected-type", "validated": true, "ani": 78.8141, "matched_fragments": 382, "total_fragments": 1189, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paenarthrobacter nicotinovorans", "strain": "strain=ATCC 49919", "accession": "GCA_021919345.1", "taxid": 29320, "species_taxid": 29320, "relation_to_type": "suspected-type", "validated": true, "ani": 78.7786, "matched_fragments": 387, "total_fragments": 1189, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paenarthrobacter nicotinovorans", "strain": "strain=JCM 3874", "accession": "GCA_014648735.1", "taxid": 29320, "species_taxid": 29320, "relation_to_type": "suspected-type", "validated": true, "ani": 78.6778, "matched_fragments": 388, "total_fragments": 1189, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter jiangjiafuii", "strain": "strain=zg-ZUI227", "accession": "GCA_018622995.1", "taxid": 2817475, "species_taxid": 2817475, "relation_to_type": "type", "validated": true, "ani": 78.605, "matched_fragments": 275, "total_fragments": 1189, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sinomonas notoginsengisoli", "strain": "strain=KCTC 29237", "accession": "GCA_021554725.1", "taxid": 1457311, "species_taxid": 1457311, "relation_to_type": "type", "validated": true, "ani": 78.5955, "matched_fragments": 345, "total_fragments": 1189, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter jiangjiafuii", "strain": "strain=zg-ZUI227", "accession": "GCA_017898065.1", "taxid": 2817475, "species_taxid": 2817475, "relation_to_type": "type", "validated": true, "ani": 78.4985, "matched_fragments": 278, "total_fragments": 1189, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Glutamicibacter protophormiae", "strain": "strain=DSM 20168", "accession": "GCA_017876615.1", "taxid": 37930, "species_taxid": 37930, "relation_to_type": "type", "validated": true, "ani": 78.4694, "matched_fragments": 270, "total_fragments": 1189, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter livingstonensis", "strain": "strain=LI2", "accession": "GCA_003219815.1", "taxid": 670078, "species_taxid": 670078, "relation_to_type": "type", "validated": true, "ani": 78.3398, "matched_fragments": 304, "total_fragments": 1189, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Glutamicibacter 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"vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Arthrobacter", "woluwensis", "NBRC", "107840" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }