{ "tc_result": [ { "organism_name": "Nocardioides jensenii", "strain": "strain=NBRC 14755", "accession": "GCA_001552535.1", "taxid": 1843, "species_taxid": 1843, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1596, "total_fragments": 1607, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Nocardioides daedukensis", "strain": "strain=DSM 23819", "accession": "GCA_013408415.1", "taxid": 634462, "species_taxid": 634462, "relation_to_type": "type", "validated": true, "ani": 81.9003, "matched_fragments": 781, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides guangzhouensis", "strain": "strain=130", "accession": "GCA_004519545.1", "taxid": 2497878, "species_taxid": 2497878, "relation_to_type": "type", "validated": true, "ani": 80.8268, "matched_fragments": 726, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides ginsengisegetis", "strain": "strain=DSM 21349", "accession": "GCA_014138045.1", "taxid": 661491, "species_taxid": 661491, "relation_to_type": "type", "validated": true, "ani": 80.6975, "matched_fragments": 679, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides donggukensis", "strain": "strain=MJB4", "accession": "GCA_014842875.1", "taxid": 2774019, "species_taxid": 2774019, "relation_to_type": "type", "validated": true, "ani": 80.5086, "matched_fragments": 655, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides marinisabuli", "strain": "strain=DSM 18965", "accession": "GCA_013466785.1", "taxid": 419476, "species_taxid": 419476, "relation_to_type": "type", "validated": true, "ani": 80.3914, "matched_fragments": 658, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides ungokensis", "strain": "strain=LMG 28591", "accession": "GCA_013466985.1", "taxid": 1643322, "species_taxid": 1643322, "relation_to_type": "type", "validated": true, "ani": 80.3912, "matched_fragments": 650, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides luti", "strain": "strain=KIGAM211", "accession": "GCA_014212315.1", "taxid": 2761101, "species_taxid": 2761101, "relation_to_type": "type", "validated": true, "ani": 80.3628, "matched_fragments": 698, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides szechwanensis", "strain": "strain=CGMCC 1.11147", "accession": "GCA_900103935.1", "taxid": 1005944, "species_taxid": 1005944, "relation_to_type": "type", "validated": true, "ani": 80.2879, "matched_fragments": 643, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides szechwanensis", "strain": "strain=NBRC 108562", "accession": "GCA_007992395.1", "taxid": 1005944, "species_taxid": 1005944, "relation_to_type": "type", "validated": true, "ani": 80.201, "matched_fragments": 653, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides lacusdianchii", "strain": "strain=JXJ CY 38", "accession": "GCA_020102855.1", "taxid": 2783664, "species_taxid": 2783664, "relation_to_type": "type", "validated": true, "ani": 80.1739, "matched_fragments": 626, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides cavernaquae", "strain": "strain=K1W22B-1", "accession": "GCA_003600895.1", "taxid": 2321396, "species_taxid": 2321396, "relation_to_type": "type", "validated": true, "ani": 80.17, "matched_fragments": 528, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides lijunqiniae", "strain": "strain=S-531", "accession": "GCA_015024225.1", "taxid": 2760832, "species_taxid": 2760832, "relation_to_type": "type", "validated": true, "ani": 80.1037, "matched_fragments": 661, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides kribbensis", "strain": "strain=DSM 16314", "accession": "GCA_015070375.1", "taxid": 305517, "species_taxid": 305517, "relation_to_type": "type", "validated": true, "ani": 80.0811, "matched_fragments": 652, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides psychrotolerans", "strain": "strain=NBRC 108563", "accession": "GCA_007992415.1", "taxid": 1005945, "species_taxid": 1005945, "relation_to_type": "type", "validated": true, "ani": 80.0147, "matched_fragments": 645, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides alcanivorans", "strain": "strain=NGK65", "accession": "GCA_021555175.1", "taxid": 2897352, "species_taxid": 2897352, "relation_to_type": "type", "validated": true, "ani": 79.9866, "matched_fragments": 643, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides deserti", "strain": "strain=SC8A-24", "accession": "GCA_014266025.1", "taxid": 1588644, "species_taxid": 1588644, "relation_to_type": "type", "validated": true, "ani": 79.9792, "matched_fragments": 645, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides psychrotolerans", "strain": "strain=CGMCC 1.11156", "accession": "GCA_900113685.1", "taxid": 1005945, "species_taxid": 1005945, "relation_to_type": "type", "validated": true, "ani": 79.9789, "matched_fragments": 651, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides deserti", "strain": "strain=CGMCC 4.7183", "accession": "GCA_014646035.1", "taxid": 1588644, "species_taxid": 1588644, "relation_to_type": "type", "validated": true, "ani": 79.9601, "matched_fragments": 635, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides okcheonensis", "strain": "strain=MMS20-HV4-12", "accession": "GCA_020991065.1", "taxid": 2894081, "species_taxid": 2894081, "relation_to_type": "type", "validated": true, "ani": 79.9492, "matched_fragments": 648, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides jejuensis", "strain": "strain=18JY15-6", "accession": "GCA_004337475.1", "taxid": 2502782, "species_taxid": 2502782, "relation_to_type": "type", "validated": true, "ani": 79.7013, "matched_fragments": 489, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides speluncae", "strain": "strain=YIM ART13", "accession": "GCA_003121585.1", "taxid": 2670337, "species_taxid": 2670337, "relation_to_type": "type", "validated": true, "ani": 79.6948, "matched_fragments": 698, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides alkalitolerans", "strain": "strain=DSM 16699", "accession": "GCA_000426525.1", "taxid": 281714, "species_taxid": 281714, "relation_to_type": "type", "validated": true, "ani": 79.689, "matched_fragments": 585, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides panacis", "strain": "strain=G188", "accession": "GCA_019039255.1", "taxid": 2849501, "species_taxid": 2849501, "relation_to_type": "type", "validated": true, "ani": 79.488, "matched_fragments": 595, "total_fragments": 1607, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_001552535.1", "gtdb_species": "s__Nocardioides jensenii", "ani": 100.0, "matched_fragments": 1596, "total_fragments": 1607, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_001426745.1", "gtdb_species": "s__Nocardioides sp001426745", "ani": 87.1019, "matched_fragments": 1163, "total_fragments": 1607, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.99", "min_intra_species_ani": "98.75", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.95", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_012272695.1", "gtdb_species": "s__Nocardioides sp012272695", "ani": 83.6714, "matched_fragments": 929, "total_fragments": 1607, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001429555.1", "gtdb_species": "s__Nocardioides sp001429555", "ani": 83.5962, "matched_fragments": 980, "total_fragments": 1607, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013408415.1", "gtdb_species": "s__Nocardioides daedukensis", "ani": 81.9003, "matched_fragments": 781, "total_fragments": 1607, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014842875.1", "gtdb_species": "s__Nocardioides sp014842875", "ani": 80.5267, "matched_fragments": 653, "total_fragments": 1607, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_902805925.1", "gtdb_species": "s__Nocardioides sp902805925", "ani": 80.2971, "matched_fragments": 512, "total_fragments": 1607, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900103935.1", "gtdb_species": "s__Nocardioides szechwanensis", "ani": 80.2965, "matched_fragments": 642, "total_fragments": 1607, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" } ] }