{ "type": "genome", "identifier": "GCF_001553455.1", "organism": "Streptomyces hygroscopicus subsp. hygroscopicus", "title": "Streptomyces hygroscopicus subsp. hygroscopicus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "National Institute of Technology and Evaluation Biological Resource Center", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001553455.1", "bioproject": "PRJNA224116", "biosample": "SAMD00022817", "wgs_master": "BBOX00000000.1", "refseq_category": "na", "taxid": "68042", "species_taxid": "1912", "organism_name": "Streptomyces hygroscopicus subsp. hygroscopicus", "infraspecific_name": "strain=NBRC 13472", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/02/02", "asm_name": "ASM155345v1", "asm_submitter": "National Institute of Technology and Evaluation Biological Resource Center", "gbrs_paired_asm": "GCA_001553455.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/553/455/GCF_001553455.1_ASM155345v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "9464604", "genome_size_ungapped": "9464604", "gc_percent": "72.000000", "replicon_count": "0", "scaffold_count": "680", "contig_count": "680", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001553455.1-RS_2024_08_19", "annotation_date": "2024-08-19", "total_gene_count": "8219", "protein_coding_gene_count": "7735", "non_coding_gene_count": "72", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-02-02", "dateModified": "2016-02-02", "datePublished": "2016-02-02", "_annotation": { "sample_count": 1, "sample_organism": [ "Streptomyces hygroscopicus subsp. hygroscopicus" ], "sample_taxid": [ "68042" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "NA" ], "sample_host_location_id": [], "data_size": "2.546 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 1.04, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "9464604", "Number of Sequences": "680", "Longest Sequences (bp)": "169328", "N50 (bp)": "28354", "Gap Ratio (%)": "0.000180", "GCcontent (%)": "72.0", "Number of CDSs": "7679", "Average Protein Length": "313.4", "Coding Ratio (%)": "76.3", "Number of rRNAs": "2", "Number of tRNAs": "87", "Number of CRISPRs": "5" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Streptomyces hygroscopicus subsp. hygroscopicus", "strain": "strain=NBRC 13472", 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