{ "tc_result": [ { "organism_name": "Aliiruegeria sabulilitoris", "strain": "strain=GJMS-35", "accession": "GCA_001558155.1", "taxid": 1510458, "species_taxid": 1510458, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1713, "total_fragments": 1719, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Aliiruegeria lutimaris", "strain": "strain=DSM 25294", "accession": "GCA_900099935.1", "taxid": 571298, "species_taxid": 571298, "relation_to_type": "type", "validated": true, "ani": 91.2805, "matched_fragments": 1389, "total_fragments": 1719, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aliiruegeria haliotis", "strain": "strain=DSM 29328", "accession": "GCA_003003255.1", "taxid": 1280846, "species_taxid": 1280846, "relation_to_type": "type", "validated": true, "ani": 79.7131, "matched_fragments": 662, "total_fragments": 1719, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tropicimonas isoalkanivorans", "strain": "strain=DSM 19548", "accession": "GCA_900112335.1", "taxid": 441112, "species_taxid": 441112, "relation_to_type": "type", "validated": true, "ani": 79.1693, "matched_fragments": 554, "total_fragments": 1719, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovulum steppense", "strain": "strain=DSM 21153", "accession": "GCA_004339675.1", "taxid": 540251, "species_taxid": 540251, "relation_to_type": "type", "validated": true, "ani": 78.246, "matched_fragments": 399, "total_fragments": 1719, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovulum tesquicola", "strain": "strain=A-36s", "accession": "GCA_024128855.1", "taxid": 540254, "species_taxid": 540254, "relation_to_type": "type", "validated": true, "ani": 78.2337, "matched_fragments": 391, "total_fragments": 1719, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Yangia pacifica", "strain": "strain=CGMCC 1.3455", "accession": "GCA_900100725.1", "taxid": 311180, "species_taxid": 311180, "relation_to_type": "suspected-type", "validated": true, "ani": 78.1839, "matched_fragments": 453, "total_fragments": 1719, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Yangia pacifica", "strain": "strain=DSM 26894", "accession": "GCA_900116195.1", "taxid": 311180, "species_taxid": 311180, "relation_to_type": "suspected-type", "validated": true, "ani": 78.1227, "matched_fragments": 459, "total_fragments": 1719, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovulum visakhapatnamense", "strain": "strain=JA181", "accession": "GCA_004365965.1", "taxid": 364297, "species_taxid": 364297, "relation_to_type": "type", "validated": true, "ani": 78.0805, "matched_fragments": 425, "total_fragments": 1719, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Dinoroseobacter shibae", "strain": "strain=DFL 12", "accession": "GCA_000018145.1", "taxid": 215813, "species_taxid": 215813, "relation_to_type": "type", "validated": true, "ani": 78.0526, "matched_fragments": 379, "total_fragments": 1719, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovulum euryhalinum", "strain": "strain=DSM 4868", "accession": "GCA_004342445.1", "taxid": 35805, "species_taxid": 35805, "relation_to_type": "type", "validated": true, "ani": 77.9864, "matched_fragments": 397, "total_fragments": 1719, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovulum adriaticum", "strain": "strain=DSM 2781", "accession": "GCA_016583705.1", "taxid": 35804, "species_taxid": 35804, "relation_to_type": "type", "validated": true, "ani": 77.9534, "matched_fragments": 324, "total_fragments": 1719, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseovarius indicus", "strain": "strain=DSM 26383", "accession": "GCA_008728195.1", "taxid": 540747, "species_taxid": 540747, "relation_to_type": "type", "validated": true, "ani": 77.9059, "matched_fragments": 367, "total_fragments": 1719, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Litoreibacter ponti", "strain": "strain=DSM 100977", "accession": "GCA_003054285.1", "taxid": 1510457, "species_taxid": 1510457, "relation_to_type": "type", "validated": true, "ani": 77.7784, "matched_fragments": 308, "total_fragments": 1719, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudooceanicola endophyticus", "strain": "strain=CBS1P-1", "accession": "GCA_018760365.1", "taxid": 2841273, "species_taxid": 2841273, "relation_to_type": "type", "validated": true, "ani": 77.6631, "matched_fragments": 381, "total_fragments": 1719, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseibacterium elongatum", "strain": "strain=DFL-43", "accession": "GCA_000590925.1", "taxid": 159346, "species_taxid": 159346, "relation_to_type": "type", "validated": true, "ani": 77.647, "matched_fragments": 353, "total_fragments": 1719, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus siganidrum", "strain": "strain=M26", "accession": "GCA_003709565.1", "taxid": 1276757, "species_taxid": 1276757, "relation_to_type": "type", "validated": true, "ani": 77.6287, "matched_fragments": 376, "total_fragments": 1719, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus siganidrum", "strain": "strain=DSM 26381", "accession": "GCA_003594835.1", "taxid": 1276757, "species_taxid": 1276757, "relation_to_type": "type", "validated": true, "ani": 77.6255, "matched_fragments": 367, "total_fragments": 1719, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alexandriicola marinus", "strain": "strain=LZ-14", "accession": "GCA_004000435.1", "taxid": 2081710, "species_taxid": 2081710, "relation_to_type": "type", "validated": true, "ani": 77.529, "matched_fragments": 294, "total_fragments": 1719, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mameliella sediminis", "strain": "strain=DP3N28-2", "accession": "GCA_019218285.1", "taxid": 2836866, "species_taxid": 2836866, "relation_to_type": "type", "validated": true, "ani": 77.5102, "matched_fragments": 340, "total_fragments": 1719, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rubellimicrobium roseum", "strain": "strain=YIM 48858", "accession": "GCA_006152145.1", "taxid": 687525, "species_taxid": 687525, "relation_to_type": "type", "validated": true, "ani": 77.3355, "matched_fragments": 265, "total_fragments": 1719, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Palleronia rufa", "strain": "strain=MOLA 401", "accession": "GCA_000743715.1", "taxid": 1530186, "species_taxid": 1530186, "relation_to_type": "type", "validated": true, "ani": 77.3238, "matched_fragments": 289, "total_fragments": 1719, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_001558155.1", "gtdb_species": "s__Tropicimonas sabulilitoris", "ani": 100.0, "matched_fragments": 1713, "total_fragments": 1719, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tropicimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_900099935.1", "gtdb_species": "s__Tropicimonas lutimaris", "ani": 91.2759, "matched_fragments": 1390, "total_fragments": 1719, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tropicimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004146235.1", "gtdb_species": "s__Tropicimonas sp004146235", "ani": 80.6868, "matched_fragments": 805, "total_fragments": 1719, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tropicimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900188335.1", "gtdb_species": "s__Tropicimonas sediminicola", "ani": 80.6369, "matched_fragments": 815, "total_fragments": 1719, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tropicimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003003255.1", "gtdb_species": "s__Tropicimonas haliotis", "ani": 79.6974, "matched_fragments": 664, "total_fragments": 1719, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tropicimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900112335.1", "gtdb_species": "s__Tropicimonas isoalkanivorans", "ani": 79.1766, "matched_fragments": 554, "total_fragments": 1719, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tropicimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_018139985.1", "gtdb_species": "s__JAGSOU01 sp018139985", "ani": 78.8975, "matched_fragments": 456, "total_fragments": 1719, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__JAGSOU01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003390845.1", "gtdb_species": "s__Tropicimonas sp003390845", "ani": 78.4719, "matched_fragments": 518, "total_fragments": 1719, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tropicimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_005870025.1", "gtdb_species": "s__Mangrovicoccus sp005870025", "ani": 78.1547, "matched_fragments": 489, "total_fragments": 1719, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Mangrovicoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900142185.1", "gtdb_species": "s__Lutimaribacter pacificus", "ani": 78.1528, "matched_fragments": 418, "total_fragments": 1719, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Lutimaribacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003340565.1", "gtdb_species": "s__HLUCCA09 sp003340565", "ani": 77.8194, "matched_fragments": 399, "total_fragments": 1719, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__HLUCCA09", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003709565.1", "gtdb_species": "s__Paracoccus siganidrum", "ani": 77.6213, "matched_fragments": 377, "total_fragments": 1719, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_009827095.1", "gtdb_species": "s__Pseudooceanicola sp009827095", "ani": 77.6109, "matched_fragments": 387, "total_fragments": 1719, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudooceanicola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" } ] }