{
    "type": "genome",
    "identifier": "GCF_001571005.1",
    "organism": "Herbiconiux solani NBRC 106740",
    "title": "Herbiconiux solani NBRC 106740",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "National Institute of Technology and Evaluation",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_001571005.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMD00046479",
        "wgs_master": "BCST00000000.1",
        "refseq_category": "reference genome",
        "taxid": "1220584",
        "species_taxid": "661329",
        "organism_name": "Herbiconiux solani NBRC 106740",
        "infraspecific_name": "strain=NBRC 106740",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2016/02/10",
        "asm_name": "ASM157100v1",
        "asm_submitter": "National Institute of Technology and Evaluation",
        "gbrs_paired_asm": "GCA_001571005.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/571/005/GCF_001571005.1_ASM157100v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3849769",
        "genome_size_ungapped": "3849769",
        "gc_percent": "70.000000",
        "replicon_count": "0",
        "scaffold_count": "18",
        "contig_count": "18",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_001571005.1-RS_2024_09_02",
        "annotation_date": "2024-09-02",
        "total_gene_count": "3695",
        "protein_coding_gene_count": "3617",
        "non_coding_gene_count": "55",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2016-02-10",
    "dateModified": "2016-02-10",
    "datePublished": "2016-02-10",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Herbiconiux solani NBRC 106740"
        ],
        "sample_taxid": [
            "1220584"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "missing"
        ],
        "sample_host_location_id": [],
        "data_size": "1.030 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
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        "Number of Sequences": "18",
        "Longest Sequences (bp)": "673093",
        "N50 (bp)": "415719",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "70.2",
        "Number of CDSs": "3654",
        "Average Protein Length": "322.7",
        "Coding Ratio (%)": "91.9",
        "Number of rRNAs": "1",
        "Number of tRNAs": "54",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
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                "status": "below_threshold"
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            {
                "organism_name": "Herbiconiux moechotypicola",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cnuibacter physcomitrellae",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "status": "below_threshold"
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            {
                "organism_name": "Leifsonia soli",
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                "species_taxid": 582665,
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                "status": "below_threshold"
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            {
                "organism_name": "Clavibacter michiganensis subsp. tessellarius",
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            },
            {
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                "status": "below_threshold"
            },
            {
                "organism_name": "Clavibacter michiganensis subsp. insidiosus",
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                "accession": "GCA_003693415.1",
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                "ani": 79.1749,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agromyces mariniharenae",
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                "accession": "GCA_008122505.1",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Clavibacter phaseoli",
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                "accession": "GCA_021922925.1",
                "taxid": 1734031,
                "species_taxid": 1734031,
                "relation_to_type": "type",
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                "matched_fragments": 476,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agromyces flavus",
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                "status": "below_threshold"
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        ],
        "cc_result": {
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                "accession": "GCF_001571005.1",
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        ]
    },
    "_bac2feature": {
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    "_genome_taxon": [
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        "106740"
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    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}