{ "type": "genome", "identifier": "GCF_001580025.1", "organism": "Ventosimonas gracilis", "title": "Ventosimonas gracilis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Calvin College", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001580025.1", "bioproject": "PRJNA224116", "biosample": "SAMN04450862", "wgs_master": "LSZO00000000.1", "refseq_category": "reference genome", "taxid": "1680762", "species_taxid": "1680762", "organism_name": "Ventosimonas gracilis", "infraspecific_name": "strain=CV58", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/03/03", "asm_name": "ASM158002v1", "asm_submitter": "Calvin College", "gbrs_paired_asm": "GCA_001580025.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/580/025/GCF_001580025.1_ASM158002v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2619147", "genome_size_ungapped": "2619147", "gc_percent": "55.000000", "replicon_count": "0", "scaffold_count": "222", "contig_count": "222", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001580025.1-RS_2024_08_06", "annotation_date": "2024-08-06", "total_gene_count": "2672", "protein_coding_gene_count": "2531", "non_coding_gene_count": "51", "pubmed_id": "27054961" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-03-03", "dateModified": "2016-03-03", "datePublished": "2016-03-03", "_annotation": { "sample_count": 1, "sample_organism": [ "Ventosimonas gracilis" ], "sample_taxid": [ "1680762" ], "sample_host_organism": [ "Cephalotes varians" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA: Key Largo, FL" ], "sample_host_location_id": [], "data_size": "0.742 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "2619147", "Number of Sequences": "222", "Longest Sequences (bp)": "107250", "N50 (bp)": "44474", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "54.9", "Number of CDSs": "2440", "Average Protein Length": "313.5", "Coding Ratio (%)": "87.6", "Number of rRNAs": "3", "Number of tRNAs": "43", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Ventosimonas gracilis", "strain": "strain=CV58", "accession": "GCA_001580025.1", "taxid": 1680762, "species_taxid": 1680762, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 798, "total_fragments": 801, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pseudomonas oleovorans subsp. oleovorans", "strain": "strain=DSM 1045", "accession": "GCA_002197815.1", "taxid": 1218129, "species_taxid": 301, "relation_to_type": "type", "validated": true, "ani": 76.6649, "matched_fragments": 94, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas oleovorans subsp. oleovorans", "strain": "strain=NBRC 13583", "accession": "GCA_002091815.1", "taxid": 1218129, "species_taxid": 301, "relation_to_type": "type", "validated": true, "ani": 76.6603, "matched_fragments": 92, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas oleovorans", "strain": "strain=NCTC10692", "accession": "GCA_900455615.1", "taxid": 301, "species_taxid": 301, "relation_to_type": "type", "validated": true, "ani": 76.6361, "matched_fragments": 96, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas cavernae", "strain": "strain=K2W31S-8", "accession": "GCA_003595175.1", "taxid": 2320867, "species_taxid": 2320867, "relation_to_type": "type", "validated": true, "ani": 76.599, "matched_fragments": 112, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas carbonaria", "strain": "strain=CIP 111764", "accession": "GCA_904061905.1", "taxid": 2762745, "species_taxid": 2762745, "relation_to_type": "type", "validated": true, "ani": 76.5887, "matched_fragments": 127, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas oryzae", "strain": "strain=KCTC 32247", "accession": "GCA_900104805.1", "taxid": 1392877, "species_taxid": 1392877, "relation_to_type": "type", "validated": true, "ani": 76.5582, "matched_fragments": 97, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas thermotolerans", "strain": "strain=DSM 14292", "accession": "GCA_000364625.1", "taxid": 157784, "species_taxid": 157784, "relation_to_type": "type", "validated": true, "ani": 76.4395, "matched_fragments": 101, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas rhizoryzae", "strain": "strain=RY24", "accession": "GCA_005250615.1", "taxid": 2571129, "species_taxid": 2571129, "relation_to_type": "type", "validated": true, "ani": 76.3631, "matched_fragments": 68, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas hydrolytica", "strain": "strain=DSWY01", "accession": "GCA_021495345.2", "taxid": 2493633, "species_taxid": 2493633, "relation_to_type": "type", "validated": true, "ani": 76.3555, "matched_fragments": 107, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas flavescens", "strain": "strain=NBRC 103044", "accession": "GCA_002091575.1", "taxid": 29435, "species_taxid": 29435, "relation_to_type": "type", "validated": true, "ani": 76.3474, "matched_fragments": 89, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas guguanensis", "strain": "strain=JCM 18416", "accession": "GCA_900104265.1", "taxid": 1198456, "species_taxid": 1198456, "relation_to_type": "type", "validated": true, "ani": 76.3175, "matched_fragments": 105, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas sihuiensis", "strain": "strain=KCTC 32246", "accession": "GCA_900106015.1", "taxid": 1274359, "species_taxid": 1274359, "relation_to_type": "type", "validated": true, "ani": 76.2916, "matched_fragments": 100, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas degradans", "strain": "strain=DSM 50238", "accession": "GCA_024448505.1", "taxid": 2968968, "species_taxid": 2968968, "relation_to_type": "type", "validated": true, "ani": 76.2859, "matched_fragments": 94, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas flavescens", "strain": "strain=LMG 18387", "accession": "GCA_900100535.1", "taxid": 29435, "species_taxid": 29435, "relation_to_type": "type", "validated": true, "ani": 76.283, "matched_fragments": 90, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas peli", "strain": "strain=DSM 17833", "accession": "GCA_012986145.1", "taxid": 592361, "species_taxid": 592361, "relation_to_type": "type", "validated": true, "ani": 76.2768, "matched_fragments": 91, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas degradans", "strain": "strain=FDAARGOS_876", "accession": "GCA_016028635.1", "taxid": 2968968, "species_taxid": 2968968, "relation_to_type": "suspected-type", "validated": true, "ani": 76.2612, "matched_fragments": 95, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas peli", "strain": "strain=DSM 17833", "accession": "GCA_900099645.1", "taxid": 592361, "species_taxid": 592361, "relation_to_type": "type", "validated": true, "ani": 76.2007, "matched_fragments": 91, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas faucium", "strain": "strain=BML-PP048", "accession": "GCA_021602585.1", "taxid": 2740518, "species_taxid": 2740518, "relation_to_type": "type", "validated": true, "ani": 76.1722, "matched_fragments": 90, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas faucium", "strain": "strain=BML-PP048", "accession": "GCA_013373935.1", "taxid": 2740518, "species_taxid": 2740518, "relation_to_type": "type", "validated": true, "ani": 76.1564, "matched_fragments": 88, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas jessenii", "strain": "strain=DSM 17150", "accession": "GCA_002236115.1", "taxid": 77298, "species_taxid": 77298, "relation_to_type": "suspected-type", "validated": true, "ani": 76.1188, "matched_fragments": 78, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas azerbaijanoriens", "strain": "strain=SWRI123", "accession": "GCA_019139795.1", "taxid": 2842350, "species_taxid": 2842350, "relation_to_type": "type", "validated": true, "ani": 75.8826, "matched_fragments": 80, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas tensinigenes", "strain": "strain=ZA 5.3", "accession": "GCA_014268445.2", "taxid": 2745511, "species_taxid": 2745511, "relation_to_type": "type", "validated": true, "ani": 75.8354, "matched_fragments": 85, "total_fragments": 801, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_001580025.1", "gtdb_species": "s__Ventosimonas gracilis", "ani": 100.0, "matched_fragments": 798, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Ventosimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_004801855.1", "gtdb_species": "s__Pseudomonas_K sp004801855", "ani": 77.0076, "matched_fragments": 87, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_K", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.38", "min_intra_species_ani": "98.38", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003696305.1", "gtdb_species": "s__Pseudomonas_E sp003696305", "ani": 76.6683, "matched_fragments": 114, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002197815.1", "gtdb_species": "s__Pseudomonas_E oleovorans", "ani": 76.6417, "matched_fragments": 93, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 96.52, "mean_intra_species_ani": "97.92", "min_intra_species_ani": "96.68", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.80", "num_clustered_genomes": 18, "status": "-" }, { "accession": "GCF_904061905.1", "gtdb_species": "s__Pseudomonas_E carbonaria", "ani": 76.601, "matched_fragments": 125, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003595175.1", "gtdb_species": "s__Pseudomonas_E sp003595175", "ani": 76.5596, "matched_fragments": 112, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003052585.1", "gtdb_species": "s__Pseudomonas_E mangrovi", "ani": 76.4867, "matched_fragments": 74, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001518815.1", "gtdb_species": "s__Pseudomonas_B oryzihabitans_E", "ani": 76.4638, "matched_fragments": 70, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.13", "min_intra_species_ani": "98.08", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.93", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_001983175.1", "gtdb_species": "s__Pseudomonas_E cedrina", "ani": 76.449, "matched_fragments": 81, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.10", "min_intra_species_ani": "97.30", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.92", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_000364625.1", "gtdb_species": "s__Pseudomonas_E thermotolerans", "ani": 76.4334, "matched_fragments": 100, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.25", "min_intra_species_ani": "99.24", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000761545.1", "gtdb_species": "s__Pseudomonas_E sp000761545", "ani": 76.4252, "matched_fragments": 92, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_015637705.1", "gtdb_species": "s__Pseudomonas_E sp015637705", "ani": 76.4025, "matched_fragments": 80, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_018704125.1", "gtdb_species": "s__Pseudomonas_F sp018704125", "ani": 76.3716, "matched_fragments": 78, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_F", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000016565.1", "gtdb_species": "s__Pseudomonas_E mendocina_A", "ani": 76.3391, "matched_fragments": 99, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.76", "min_intra_species_ani": "97.37", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.88", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_005250615.1", "gtdb_species": "s__Pseudomonas_B rhizoryzae", "ani": 76.3265, "matched_fragments": 67, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.30", "min_intra_species_ani": "97.74", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.89", "num_clustered_genomes": 15, "status": "-" }, { "accession": "GCF_008041835.1", "gtdb_species": "s__Pseudomonas_E sp002282595", "ani": 76.2842, "matched_fragments": 103, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.53", "min_intra_species_ani": "95.53", "mean_intra_species_af": "0.75", "min_intra_species_af": "0.75", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900106015.1", "gtdb_species": "s__Pseudomonas_E sihuiensis", "ani": 76.2467, "matched_fragments": 98, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 96.7402, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004920405.1", "gtdb_species": "s__Pseudomonas_E leptonychotis", "ani": 76.2265, "matched_fragments": 87, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004521985.1", "gtdb_species": "s__Pseudomonas_E khazarica", "ani": 76.2131, "matched_fragments": 97, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.35", "min_intra_species_ani": "98.01", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.87", "num_clustered_genomes": 12, "status": "-" }, { "accession": "GCF_900099645.1", "gtdb_species": "s__Pseudomonas_E peli", "ani": 76.2089, "matched_fragments": 89, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.85", "min_intra_species_ani": "96.04", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.85", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_900105995.1", "gtdb_species": "s__Pseudomonas_E pohangensis", "ani": 76.1499, "matched_fragments": 84, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013373935.1", "gtdb_species": "s__Pseudomonas_E sp002438125", "ani": 76.1461, "matched_fragments": 87, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.14", "min_intra_species_ani": "98.14", "mean_intra_species_af": "0.84", "min_intra_species_af": "0.84", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_018816095.1", "gtdb_species": "s__Pseudomonas_E sp018816095", "ani": 75.9363, "matched_fragments": 101, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.20", "min_intra_species_ani": "96.15", "mean_intra_species_af": "0.83", "min_intra_species_af": "0.82", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCA_018827205.1", "gtdb_species": "s__Pseudomonas_E sp018827205", "ani": 75.6748, "matched_fragments": 89, "total_fragments": 801, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.54", "min_intra_species_ani": "99.51", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.88", "num_clustered_genomes": 4, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": null, "cell_length": null, "doubling_h": null, "growth_tmp": null, "optimum_tmp": null, "optimum_ph": null, "genome_size": 2573563.0, "gc_content": null, "coding_genes": null, "rRNA16S_genes": null, "tRNA_genes": null, "gram_stain": null, "sporulation": null, "motility": null, "range_salinity": null, "facultative_respiration": null, "anaerobic_respiration": null, "aerobic_respiration": null, "mesophilic_range_tmp": null, "thermophilic_range_tmp": null, "psychrophilic_range_tmp": null, "bacillus_cell_shape": null, "coccus_cell_shape": null, "filament_cell_shape": null, "coccobacillus_cell_shape": null, "vibrio_cell_shape": null, "spiral_cell_shape": null }, "_genome_taxon": [ "Ventosimonas", "gracilis" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }