{
    "type": "genome",
    "identifier": "GCF_001580535.1",
    "organism": "Acetobacter cerevisiae",
    "title": "Acetobacter cerevisiae",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Ghent University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_001580535.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN03799256",
        "wgs_master": "LHZA00000000.1",
        "refseq_category": "reference genome",
        "taxid": "178900",
        "species_taxid": "178900",
        "organism_name": "Acetobacter cerevisiae",
        "infraspecific_name": "strain=LMG 1625",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2016/03/07",
        "asm_name": "ASM158053v1",
        "asm_submitter": "Ghent University",
        "gbrs_paired_asm": "GCA_001580535.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/580/535/GCF_001580535.1_ASM158053v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3088073",
        "genome_size_ungapped": "3088073",
        "gc_percent": "58.000000",
        "replicon_count": "0",
        "scaffold_count": "157",
        "contig_count": "157",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_001580535.1-RS_2024_12_22",
        "annotation_date": "2024-12-22",
        "total_gene_count": "2874",
        "protein_coding_gene_count": "2762",
        "non_coding_gene_count": "48",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2016-03-07",
    "dateModified": "2016-03-07",
    "datePublished": "2016-03-07",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Acetobacter cerevisiae"
        ],
        "sample_taxid": [
            "178900"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Canada: Toronto"
        ],
        "sample_host_location_id": [],
        "data_size": "0.878 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
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    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3088073",
        "Number of Sequences": "157",
        "Longest Sequences (bp)": "278409",
        "N50 (bp)": "51728",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "58.0",
        "Number of CDSs": "2769",
        "Average Protein Length": "320.8",
        "Coding Ratio (%)": "86.3",
        "Number of rRNAs": "3",
        "Number of tRNAs": "42",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Acetobacter cerevisiae",
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                "accession": "GCA_001580535.1",
                "taxid": 178900,
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                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 945,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Acetobacter malorum",
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                "species_taxid": 178901,
                "relation_to_type": "suspected-type",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Acetobacter persici",
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                "status": "below_threshold"
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            {
                "organism_name": "Acetobacter orleanensis",
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                "accession": "GCA_001581005.1",
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                "ani": 85.176,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Acetobacter orleanensis",
                "strain": "strain=JCM 7639T",
                "accession": "GCA_000964205.1",
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                "relation_to_type": "type",
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                "ani": 85.1743,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Acetobacter orleanensis",
                "strain": "strain=NBRC 13752",
                "accession": "GCA_006539325.1",
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                "relation_to_type": "type",
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                "matched_fragments": 679,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodovarius crocodyli",
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                "accession": "GCA_004005855.1",
                "taxid": 1979269,
                "species_taxid": 1979269,
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                "validated": true,
                "ani": 75.8929,
                "matched_fragments": 62,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
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        "cc_result": {
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                "accession": "GCF_001580535.1",
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                "total_fragments": 954,
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            },
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                "accession": "GCF_001580615.1",
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            },
            {
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            },
            {
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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        ]
    },
    "_bac2feature": {
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    "_genome_taxon": [
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        "cerevisiae"
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    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}