{ "type": "genome", "identifier": "GCF_001591205.1", "organism": "Stenotrophomonas maltophilia NBRC 14161", "title": "Stenotrophomonas maltophilia NBRC 14161", "description": "na", "data type": "Genome sequencing and assembly", "organization": "National Institute of Technology and Evaluation", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001591205.1", "bioproject": "PRJNA224116", "biosample": "SAMD00046746", "wgs_master": "BCUI00000000.1", "refseq_category": "na", "taxid": "1220593", "species_taxid": "40324", "organism_name": "Stenotrophomonas maltophilia NBRC 14161", "infraspecific_name": "strain=NBRC 14161", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/02/23", "asm_name": "ASM159120v1", "asm_submitter": "National Institute of Technology and Evaluation", "gbrs_paired_asm": "GCA_001591205.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/591/205/GCF_001591205.1_ASM159120v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4936723", "genome_size_ungapped": "4936723", "gc_percent": "66.000000", "replicon_count": "0", "scaffold_count": "131", "contig_count": "131", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001591205.1-RS_2024_05_05", "annotation_date": "2024-05-05", "total_gene_count": "4646", "protein_coding_gene_count": "4509", "non_coding_gene_count": "68", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-02-23", "dateModified": "2016-02-23", "datePublished": "2016-02-23", "_annotation": { "sample_count": 1, "sample_organism": [ "Stenotrophomonas maltophilia NBRC 14161" ], "sample_taxid": [ "1220593" ], "sample_host_organism": [], 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"status": "below_threshold" }, { "organism_name": "Xanthomonas indica", "strain": "strain=PPL560", "accession": "GCA_022669045.1", "taxid": 2912242, "species_taxid": 2912242, "relation_to_type": "type", "validated": true, "ani": 82.5606, "matched_fragments": 834, "total_fragments": 1586, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xanthomonas translucens", "strain": "strain=ATCC 19319", "accession": "GCA_020880735.1", "taxid": 343, "species_taxid": 343, "relation_to_type": "type", "validated": true, "ani": 82.4768, "matched_fragments": 662, "total_fragments": 1586, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_900186865.1", "gtdb_species": "s__Stenotrophomonas maltophilia", "ani": 99.9967, "matched_fragments": 1586, "total_fragments": 1586, "gtdb_taxonomy": 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