{
    "type": "genome",
    "identifier": "GCF_001653755.1",
    "organism": "Dokdonia donghaensis DSW-1",
    "title": "Dokdonia donghaensis DSW-1",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Yonsei University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_001653755.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN04572126",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "1300343",
        "species_taxid": "326320",
        "organism_name": "Dokdonia donghaensis DSW-1",
        "infraspecific_name": "strain=DSW-1",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2016/06/01",
        "asm_name": "ASM165375v1",
        "asm_submitter": "Yonsei University",
        "gbrs_paired_asm": "GCA_001653755.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/653/755/GCF_001653755.1_ASM165375v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3293944",
        "genome_size_ungapped": "3293944",
        "gc_percent": "38.000000",
        "replicon_count": "1",
        "scaffold_count": "1",
        "contig_count": "1",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)",
        "annotation_date": "2024-03-04",
        "total_gene_count": "2931",
        "protein_coding_gene_count": "2865",
        "non_coding_gene_count": "58",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2016-06-01",
    "dateModified": "2016-06-01",
    "datePublished": "2016-06-01",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Dokdonia donghaensis DSW-1"
        ],
        "sample_taxid": [
            "1300343"
        ],
        "sample_host_organism": [
            "not collected"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "South Korea"
        ],
        "sample_host_location_id": [],
        "data_size": "0.918 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3293944",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "3293944",
        "N50 (bp)": "3293944",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "38.2",
        "Number of CDSs": "2862",
        "Average Protein Length": "347.1",
        "Coding Ratio (%)": "90.5",
        "Number of rRNAs": "9",
        "Number of tRNAs": "45",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Dokdonia donghaensis",
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                "species_taxid": 326320,
                "relation_to_type": "type",
                "validated": true,
                "ani": 100.0,
                "matched_fragments": 1092,
                "total_fragments": 1097,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Dokdonia donghaensis",
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                "species_taxid": 326320,
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                "ani": 99.9802,
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                "status": "conclusive"
            },
            {
                "organism_name": "Dokdonia sinensis",
                "strain": "strain=SH27",
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                "species_taxid": 2479847,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Polaribacter dokdonensis",
                "strain": "strain=KCTC 12392",
                "accession": "GCA_024362345.1",
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                "species_taxid": 326329,
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                "ani": 77.4733,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dokdonia pacifica",
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                "accession": "GCA_014636685.1",
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                "status": "below_threshold"
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            {
                "organism_name": "Dokdonia pacifica",
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                "matched_fragments": 257,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Haloflavibacter putidus",
                "strain": "strain=PLHSN227",
                "accession": "GCA_006546625.1",
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                "species_taxid": 2576776,
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                "status": "below_threshold"
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            {
                "organism_name": "Tamlana haliotis",
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            {
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                "taxid": 2575815,
                "species_taxid": 2575815,
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                "ani_threshold": 95,
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            {
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            {
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            },
            {
                "organism_name": "Algibacter pacificus",
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                "status": "below_threshold"
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                "organism_name": "Aquimarina aggregata",
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            {
                "organism_name": "Salegentibacter holothuriorum",
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            {
                "organism_name": "Cellulophaga baltica",
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                "accession": "GCA_900102165.1",
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}