{
    "type": "genome",
    "identifier": "GCF_001675285.1",
    "organism": "Elizabethkingia miricola",
    "title": "Elizabethkingia miricola",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "CDC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_001675285.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMD00016624",
        "wgs_master": "LSGQ00000000.1",
        "refseq_category": "na",
        "taxid": "172045",
        "species_taxid": "172045",
        "organism_name": "Elizabethkingia miricola",
        "infraspecific_name": "strain=GTC_862",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2016/06/22",
        "asm_name": "ASM167528v1",
        "asm_submitter": "CDC",
        "gbrs_paired_asm": "GCA_001675285.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/675/285/GCF_001675285.1_ASM167528v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4293809",
        "genome_size_ungapped": "4293809",
        "gc_percent": "36.000000",
        "replicon_count": "0",
        "scaffold_count": "33",
        "contig_count": "33",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_001675285.1-RS_2024_12_23",
        "annotation_date": "2024-12-23",
        "total_gene_count": "4035",
        "protein_coding_gene_count": "3977",
        "non_coding_gene_count": "53",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2016-06-22",
    "dateModified": "2016-06-22",
    "datePublished": "2016-06-22",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Elizabethkingia miricola"
        ],
        "sample_taxid": [
            "172045"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "1.206 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4293809",
        "Number of Sequences": "33",
        "Longest Sequences (bp)": "738866",
        "N50 (bp)": "332069",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "35.8",
        "Number of CDSs": "3937",
        "Average Protein Length": "322.2",
        "Coding Ratio (%)": "88.6",
        "Number of rRNAs": "4",
        "Number of tRNAs": "42",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Elizabethkingia miricola",
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                "relation_to_type": "type",
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            {
                "organism_name": "Elizabethkingia miricola",
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            },
            {
                "organism_name": "Elizabethkingia bruuniana",
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            {
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            },
            {
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                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
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                "accession": "GCA_000331815.1",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Elizabethkingia anophelis",
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Elizabethkingia ursingii",
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                "accession": "GCA_001521765.1",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Chryseobacterium tagetis",
                "strain": "strain=RG1",
                "accession": "GCA_016735585.2",
                "taxid": 2801334,
                "species_taxid": 2801334,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 205,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Chryseobacterium fistulae",
                "strain": "strain=CECT 9393",
                "accession": "GCA_902729325.1",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Chryseobacterium faecale",
                "strain": "strain=F4",
                "accession": "GCA_019195395.1",
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                "relation_to_type": "type",
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            },
            {
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kaistella carnis",
                "strain": "strain=G0081",
                "accession": "GCA_003860585.1",
                "taxid": 1241979,
                "species_taxid": 1241979,
                "relation_to_type": "type",
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        ],
        "cc_result": {
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                "accession": "GCF_001675285.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Weeksellaceae;g__Elizabethkingia",
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        ]
    },
    "_bac2feature": {
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}