{ "type": "genome", "identifier": "GCF_001677885.1", "organism": "Janthinobacterium psychrotolerans", "title": "Janthinobacterium psychrotolerans", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Aarhus University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001677885.1", "bioproject": "PRJNA224116", "biosample": "SAMN04229034", "wgs_master": "LOCQ00000000.1", "refseq_category": "reference genome", "taxid": "1747903", "species_taxid": "1747903", "organism_name": "Janthinobacterium psychrotolerans", "infraspecific_name": "strain=S3-2", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/07/01", "asm_name": "ASM167788v1", "asm_submitter": "Aarhus University", "gbrs_paired_asm": "GCA_001677885.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/677/885/GCF_001677885.1_ASM167788v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5844062", "genome_size_ungapped": "5844062", "gc_percent": "63.000000", "replicon_count": "0", "scaffold_count": "62", "contig_count": "62", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001677885.1-RS_2024_05_02", "annotation_date": "2024-05-02", "total_gene_count": "5386", "protein_coding_gene_count": "5203", "non_coding_gene_count": "107", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-07-01", "dateModified": "2016-07-01", "datePublished": "2016-07-01", "_annotation": { "sample_count": 1, "sample_organism": [ "Janthinobacterium psychrotolerans" ], "sample_taxid": [ "1747903" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"total_fragments": 1921, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Janthinobacterium violaceinigrum", "strain": "strain=FT13W", "accession": "GCA_009208555.1", "taxid": 2654252, "species_taxid": 2654252, "relation_to_type": "type", "validated": true, "ani": 86.4119, "matched_fragments": 1450, "total_fragments": 1921, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Janthinobacterium lividum", "strain": "strain=ATCC 12473", "accession": "GCA_020858175.1", "taxid": 29581, "species_taxid": 29581, "relation_to_type": "suspected-type", "validated": true, "ani": 86.3126, "matched_fragments": 1474, "total_fragments": 1921, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Janthinobacterium lividum", "strain": "strain=NCTC9796", "accession": "GCA_900451145.1", "taxid": 29581, "species_taxid": 29581, "relation_to_type": "suspected-type", "validated": true, "ani": 86.3098, "matched_fragments": 1472, "total_fragments": 1921, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Janthinobacterium lividum", "strain": "strain=H-24", "accession": "GCA_001758635.1", "taxid": 29581, "species_taxid": 29581, "relation_to_type": "suspected-type", "validated": true, "ani": 86.2916, "matched_fragments": 1446, "total_fragments": 1921, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Janthinobacterium tructae", "strain": "strain=SNU WT3", "accession": "GCA_006517255.1", "taxid": 2590869, "species_taxid": 2590869, "relation_to_type": "type", "validated": true, "ani": 86.1887, "matched_fragments": 1481, "total_fragments": 1921, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rugamonas brunnea", "strain": "strain=LX20W", "accession": "GCA_014042345.1", "taxid": 2758569, "species_taxid": 2758569, "relation_to_type": "type", "validated": true, "ani": 81.5154, "matched_fragments": 965, "total_fragments": 1921, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rugamonas apoptosis", "strain": "strain=LX47W", "accession": "GCA_014042355.1", "taxid": 2758570, "species_taxid": 2758570, "relation_to_type": "type", "validated": true, "ani": 81.487, "matched_fragments": 956, "total_fragments": 1921, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rugamonas fusca", "strain": "strain=FT3S", "accession": "GCA_014042365.1", "taxid": 2758568, "species_taxid": 2758568, "relation_to_type": "type", "validated": true, "ani": 81.335, "matched_fragments": 970, "total_fragments": 1921, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Duganella aceris", "strain": "strain=SAP-35", "accession": "GCA_011090165.1", "taxid": 2703883, "species_taxid": 2703883, "relation_to_type": "type", "validated": true, "ani": 81.1744, "matched_fragments": 1014, "total_fragments": 1921, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilia cavernae", "strain": "strain=K1S02-61", 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