{
    "type": "genome",
    "identifier": "GCF_001685015.1",
    "organism": "Bacillus wudalianchiensis",
    "title": "Bacillus wudalianchiensis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Fujian Academy of Agricultural Sciences",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_001685015.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN05003832",
        "wgs_master": "MAYT00000000.1",
        "refseq_category": "reference genome",
        "taxid": "1743143",
        "species_taxid": "1743143",
        "organism_name": "Bacillus wudalianchiensis",
        "infraspecific_name": "strain=FJAT-27215",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2016/07/14",
        "asm_name": "ASM168501v1",
        "asm_submitter": "Fujian Academy of Agricultural Sciences",
        "gbrs_paired_asm": "GCA_001685015.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/685/015/GCF_001685015.1_ASM168501v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4427097",
        "genome_size_ungapped": "4427097",
        "gc_percent": "41.000000",
        "replicon_count": "0",
        "scaffold_count": "32",
        "contig_count": "32",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_001685015.1-RS_2024_05_02",
        "annotation_date": "2024-05-02",
        "total_gene_count": "4466",
        "protein_coding_gene_count": "4311",
        "non_coding_gene_count": "92",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2016-07-14",
    "dateModified": "2016-07-14",
    "datePublished": "2016-07-14",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacillus wudalianchiensis"
        ],
        "sample_taxid": [
            "1743143"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China: Heilongjiang"
        ],
        "sample_host_location_id": [],
        "data_size": "1.254 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4427097",
        "Number of Sequences": "32",
        "Longest Sequences (bp)": "868499",
        "N50 (bp)": "452696",
        "Gap Ratio (%)": "0.000452",
        "GCcontent (%)": "41.2",
        "Number of CDSs": "4339",
        "Average Protein Length": "286.8",
        "Coding Ratio (%)": "84.3",
        "Number of rRNAs": "5",
        "Number of tRNAs": "80",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Bacillus wudalianchiensis",
                "strain": "strain=FJAT-27215",
                "accession": "GCA_001685015.1",
                "taxid": 1743143,
                "species_taxid": 1743143,
                "relation_to_type": "type",
                "validated": true,
                "ani": 100.0,
                "matched_fragments": 1461,
                "total_fragments": 1464,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Bacillus badius",
                "strain": "strain=NBRC 15713",
                "accession": "GCA_001591605.1",
                "taxid": 1455,
                "species_taxid": 1455,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.4807,
                "matched_fragments": 682,
                "total_fragments": 1464,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus aerolatus",
                "strain": "strain=CX253",
                "accession": "GCA_009183655.1",
                "taxid": 2653354,
                "species_taxid": 2653354,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.6581,
                "matched_fragments": 556,
                "total_fragments": 1464,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus thermotolerans",
                "strain": "strain=SGZ-8",
                "accession": "GCA_000812025.2",
                "taxid": 1221996,
                "species_taxid": 1221996,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.1016,
                "matched_fragments": 282,
                "total_fragments": 1464,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus thermotolerans",
                "strain": "strain=SgZ-8",
                "accession": "GCA_011751085.1",
                "taxid": 1221996,
                "species_taxid": 1221996,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.06,
                "matched_fragments": 278,
                "total_fragments": 1464,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus xiapuensis",
                "strain": "strain=FJAT-46582",
                "accession": "GCA_002797355.1",
                "taxid": 2014075,
                "species_taxid": 2014075,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.9049,
                "matched_fragments": 210,
                "total_fragments": 1464,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus ectoiniformans",
                "strain": "strain=DSM 28970",
                "accession": "GCA_016908875.1",
                "taxid": 1494429,
                "species_taxid": 1494429,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.5983,
                "matched_fragments": 202,
                "total_fragments": 1464,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Domibacillus robiginosus",
                "strain": "strain=WS 4628",
                "accession": "GCA_000966195.1",
                "taxid": 1071054,
                "species_taxid": 1071054,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.0498,
                "matched_fragments": 111,
                "total_fragments": 1464,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus marasmi",
                "strain": "strain=Marseille-P3556",
                "accession": "GCA_902168435.1",
                "taxid": 1926279,
                "species_taxid": 1926279,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.0338,
                "matched_fragments": 63,
                "total_fragments": 1464,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Domibacillus indicus",
                "strain": "strain=SD 111",
                "accession": "GCA_000970685.1",
                "taxid": 1437523,
                "species_taxid": 1437523,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.0054,
                "matched_fragments": 107,
                "total_fragments": 1464,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Domibacillus iocasae",
                "strain": "strain=DSM 29979",
                "accession": "GCA_001750285.1",
                "taxid": 1714016,
                "species_taxid": 1714016,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9553,
                "matched_fragments": 111,
                "total_fragments": 1464,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Domibacillus epiphyticus",
                "strain": "strain=SAB 38",
                "accession": "GCA_001975785.1",
                "taxid": 1714355,
                "species_taxid": 1714355,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9478,
                "matched_fragments": 110,
                "total_fragments": 1464,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus licheniformis",
                "strain": "strain=DSM 13",
                "accession": "GCA_022630555.1",
                "taxid": 1402,
                "species_taxid": 1402,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9413,
                "matched_fragments": 55,
                "total_fragments": 1464,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Neobacillus thermocopriae",
                "strain": "strain=SgZ-7",
                "accession": "GCA_010975035.1",
                "taxid": 1215031,
                "species_taxid": 1215031,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8517,
                "matched_fragments": 64,
                "total_fragments": 1464,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Domibacillus antri",
                "strain": "strain=XD80",
                "accession": "GCA_001936625.1",
                "taxid": 1714264,
                "species_taxid": 1714264,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8064,
                "matched_fragments": 109,
                "total_fragments": 1464,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus suaedaesalsae",
                "strain": "strain=RD4P76",
                "accession": "GCA_016890225.1",
                "taxid": 2810349,
                "species_taxid": 2810349,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7709,
                "matched_fragments": 50,
                "total_fragments": 1464,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_001685015.1",
                "gtdb_species": "s__Pseudobacillus wudalianchiensis",
                "ani": 100.0,
                "matched_fragments": 1461,
                "total_fragments": 1464,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Domibacillaceae;g__Pseudobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.18",
                "min_intra_species_ani": "96.18",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCF_003600835.1",
                "gtdb_species": "s__Pseudobacillus sp003600835",
                "ani": 82.0659,
                "matched_fragments": 894,
                "total_fragments": 1464,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Domibacillaceae;g__Pseudobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001591605.1",
                "gtdb_species": "s__Pseudobacillus badius",
                "ani": 80.4808,
                "matched_fragments": 682,
                "total_fragments": 1464,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Domibacillaceae;g__Pseudobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.55",
                "min_intra_species_ani": "97.77",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 8,
                "status": "-"
            },
            {
                "accession": "GCF_009183655.1",
                "gtdb_species": "s__Pseudobacillus aerolatus",
                "ani": 79.6488,
                "matched_fragments": 557,
                "total_fragments": 1464,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Domibacillaceae;g__Pseudobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_016820555.1",
                "gtdb_species": "s__FJAT-46582 sp016820555",
                "ani": 78.1311,
                "matched_fragments": 266,
                "total_fragments": 1464,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Domibacillaceae;g__FJAT-46582",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002261155.1",
                "gtdb_species": "s__FJAT-46582 sp002261155",
                "ani": 78.0268,
                "matched_fragments": 237,
                "total_fragments": 1464,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Domibacillaceae;g__FJAT-46582",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002797375.1",
                "gtdb_species": "s__FJAT-46582 sp002797375",
                "ani": 78.0151,
                "matched_fragments": 254,
                "total_fragments": 1464,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Domibacillaceae;g__FJAT-46582",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.55",
                "min_intra_species_ani": "96.55",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_002797355.1",
                "gtdb_species": "s__FJAT-46582 sp002797355",
                "ani": 77.8944,
                "matched_fragments": 209,
                "total_fragments": 1464,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Domibacillaceae;g__FJAT-46582",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001750285.1",
                "gtdb_species": "s__Domibacillus iocasae",
                "ani": 76.971,
                "matched_fragments": 112,
                "total_fragments": 1464,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Domibacillaceae;g__Domibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002860165.1",
                "gtdb_species": "s__Bacillus_BJ sp002860165",
                "ani": 76.9682,
                "matched_fragments": 68,
                "total_fragments": 1464,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Bacillus_BJ",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001936625.1",
                "gtdb_species": "s__Domibacillus antri",
                "ani": 76.7848,
                "matched_fragments": 110,
                "total_fragments": 1464,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Domibacillaceae;g__Domibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001636345.1",
                "gtdb_species": "s__Cytobacillus gottheilii",
                "ani": 76.7169,
                "matched_fragments": 87,
                "total_fragments": 1464,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Cytobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.50",
                "min_intra_species_ani": "95.11",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 3,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.176,
        "cell_length": 0.387,
        "doubling_h": -0.134,
        "growth_tmp": 31.412,
        "optimum_tmp": 33.64,
        "optimum_ph": 7.746,
        "genome_size": 4544138.117,
        "gc_content": 40.577,
        "coding_genes": 4334.002,
        "rRNA16S_genes": 9.859,
        "tRNA_genes": 88.223,
        "gram_stain": 0.993,
        "sporulation": 0.975,
        "motility": 0.841,
        "range_salinity": 0.6,
        "facultative_respiration": 0.16,
        "anaerobic_respiration": 0.011,
        "aerobic_respiration": 0.827,
        "mesophilic_range_tmp": 0.928,
        "thermophilic_range_tmp": 0.053,
        "psychrophilic_range_tmp": 0.017,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_genome_taxon": [
        "Bacillus",
        "wudalianchiensis"
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}