{ "type": "genome", "identifier": "GCF_001685355.1", "organism": "Streptomyces lincolnensis", "title": "Streptomyces lincolnensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "shanghaijiaotong university", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001685355.1", "bioproject": "PRJNA224116", "biosample": "SAMN05335414", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "1915", "species_taxid": "1915", "organism_name": "Streptomyces lincolnensis", "infraspecific_name": "strain=NRRL 2936", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/07/15", "asm_name": "ASM168535v1", "asm_submitter": "shanghaijiaotong university", "gbrs_paired_asm": "GCA_001685355.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/685/355/GCF_001685355.1_ASM168535v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "10319054", "genome_size_ungapped": "10319054", "gc_percent": "71.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2024-03-04", "total_gene_count": "9289", "protein_coding_gene_count": "8958", "non_coding_gene_count": "90", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-07-15", "dateModified": "2016-07-15", "datePublished": "2016-07-15", "_annotation": { "sample_count": 1, "sample_organism": [ "Streptomyces lincolnensis" ], "sample_taxid": [ "1915" ], "sample_host_organism": [ "missing" ], "sample_host_organism_id": [], "sample_host_disease": [], 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"below_threshold" }, { "organism_name": "Streptomyces justiciae", "strain": "strain=3R004", "accession": "GCA_015163075.1", "taxid": 2780140, "species_taxid": 2780140, "relation_to_type": "type", "validated": true, "ani": 86.3487, "matched_fragments": 2295, "total_fragments": 3439, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces antibioticus", "strain": "strain=DSM 40234", "accession": "GCA_001514065.1", "taxid": 1890, "species_taxid": 1890, "relation_to_type": "suspected-type", "validated": true, "ani": 86.2715, "matched_fragments": 2165, "total_fragments": 3439, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces lomondensis", "strain": "strain=DSM 41428", "accession": "GCA_021440105.1", "taxid": 68229, "species_taxid": 68229, "relation_to_type": "type", "validated": true, "ani": 86.2118, "matched_fragments": 2078, "total_fragments": 3439, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces ferrugineus", "strain": "strain=CCTCC AA2014009", "accession": "GCA_015160855.1", "taxid": 1413221, "species_taxid": 1413221, "relation_to_type": "type", "validated": true, "ani": 86.1745, "matched_fragments": 2242, "total_fragments": 3439, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces caeruleatus", "strain": "strain=NRRL B-24802", "accession": "GCA_001514235.1", "taxid": 661399, "species_taxid": 661399, "relation_to_type": "type", "validated": true, "ani": 86.0963, "matched_fragments": 2177, "total_fragments": 3439, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces janthinus", "strain": "strain=JCM 4387", "accession": "GCA_014649675.1", "taxid": 67308, "species_taxid": 67308, "relation_to_type": "type", "validated": true, "ani": 85.8914, "matched_fragments": 2182, "total_fragments": 3439, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces violarus", "strain": 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"GCA_023516615.1", "taxid": 1470261, "species_taxid": 1470261, "relation_to_type": "type", "validated": true, "ani": 85.6829, "matched_fragments": 1969, "total_fragments": 3439, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces plumbidurans", "strain": "strain=KC 17012", "accession": "GCA_019857225.1", "taxid": 2814589, "species_taxid": 2814589, "relation_to_type": "type", "validated": true, "ani": 85.6686, "matched_fragments": 1868, "total_fragments": 3439, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces davaonensis", "strain": "strain=JCM 4913", "accession": "GCA_000349325.1", "taxid": 348043, "species_taxid": 348043, "relation_to_type": "type", "validated": true, "ani": 85.6618, "matched_fragments": 2014, "total_fragments": 3439, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces spinoverrucosus", "strain": "strain=NBRC 14228", "accession": "GCA_006539505.1", "taxid": 284043, 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