{ "type": "genome", "identifier": "GCF_001687625.2", "organism": "Planococcus maritimus", "title": "Planococcus maritimus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "University of Malaya", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001687625.2", "bioproject": "PRJNA224116", "biosample": "SAMN05366382", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "192421", "species_taxid": "192421", "organism_name": "Planococcus maritimus", "infraspecific_name": "strain=DSM 17275", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Minor", "genome_rep": "Full", "seq_rel_date": "2016/11/01", "asm_name": "ASM168762v2", "asm_submitter": "University of Malaya", "gbrs_paired_asm": "GCA_001687625.2", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/687/625/GCF_001687625.2_ASM168762v2", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3280721", "genome_size_ungapped": "3280721", "gc_percent": "47.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2024-03-04", "total_gene_count": "3269", "protein_coding_gene_count": "3148", "non_coding_gene_count": "102", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-11-01", "dateModified": "2016-11-01", "datePublished": "2016-11-01", "_annotation": { "sample_count": 1, "sample_organism": [ "Planococcus maritimus" ], "sample_taxid": [ "192421" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Korea: Yellow Sea" ], "sample_host_location_id": [], "data_size": "0.929 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3280721", "Number of Sequences": "1", "Longest Sequences (bp)": "3280721", "N50 (bp)": "3280721", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "47.2", "Number of CDSs": "3230", "Average Protein Length": "291.9", "Coding Ratio (%)": "86.2", "Number of rRNAs": "27", "Number of tRNAs": "71", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Planococcus maritimus", "strain": "strain=DSM 17275", "accession": "GCA_001687625.2", "taxid": 192421, "species_taxid": 192421, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1093, "total_fragments": 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"spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Planococcus", "maritimus" ], "quality": 5, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }