{ "tc_result": [ { "organism_name": "Streptococcus himalayensis", "strain": "strain=HTS2", "accession": "GCA_001708305.1", "taxid": 1888195, "species_taxid": 1888195, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 756, "total_fragments": 758, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Streptococcus himalayensis", "strain": "strain=CGMCC 1.15533", "accession": "GCA_014643475.1", "taxid": 1888195, "species_taxid": 1888195, "relation_to_type": "type", "validated": true, "ani": 99.8657, "matched_fragments": 677, "total_fragments": 758, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Streptococcus marmotae", "strain": "strain=HTS5", "accession": "GCA_001623565.1", "taxid": 1825069, "species_taxid": 1825069, "relation_to_type": "type", "validated": true, "ani": 88.7577, "matched_fragments": 300, "total_fragments": 758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus respiraculi", "strain": "strain=HTS25", "accession": "GCA_003595525.1", "taxid": 2021971, "species_taxid": 2021971, "relation_to_type": "type", "validated": true, "ani": 83.7138, "matched_fragments": 239, "total_fragments": 758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus cuniculi", "strain": "strain=CCUG 65085", "accession": "GCA_001921845.1", "taxid": 1432788, "species_taxid": 1432788, "relation_to_type": "type", "validated": true, "ani": 80.1268, "matched_fragments": 217, "total_fragments": 758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus parasanguinis", "strain": "strain=ATCC 15912", "accession": "GCA_000164675.2", "taxid": 1318, "species_taxid": 1318, "relation_to_type": "suspected-type", "validated": true, "ani": 79.6164, "matched_fragments": 147, "total_fragments": 758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus australis", "strain": "strain=NCTC13166", "accession": "GCA_900476055.1", "taxid": 113107, "species_taxid": 113107, "relation_to_type": "type", "validated": true, "ani": 79.5432, "matched_fragments": 124, "total_fragments": 758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus cristatus", "strain": "strain=ATCC 51100", "accession": "GCA_011612585.1", "taxid": 45634, "species_taxid": 45634, "relation_to_type": "type", "validated": true, "ani": 79.5375, "matched_fragments": 144, "total_fragments": 758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus toyakuensis", "strain": "strain=TP1632", "accession": "GCA_024346585.1", "taxid": 2819619, "species_taxid": 2819619, "relation_to_type": "type", "validated": true, "ani": 79.5278, "matched_fragments": 136, "total_fragments": 758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus parasanguinis", "strain": "strain=NCTC12854", "accession": "GCA_900459355.1", "taxid": 1318, "species_taxid": 1318, "relation_to_type": "suspected-type", "validated": true, "ani": 79.4492, "matched_fragments": 148, "total_fragments": 758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus australis", "strain": "strain=ATCC 700641", "accession": "GCA_000222745.2", "taxid": 113107, "species_taxid": 113107, "relation_to_type": "type", "validated": true, "ani": 79.4303, "matched_fragments": 119, "total_fragments": 758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus timonensis", "strain": "strain=Marseille-P2915", "accession": "GCA_900095845.1", "taxid": 1852387, "species_taxid": 1852387, "relation_to_type": "type", "validated": true, "ani": 79.3573, "matched_fragments": 125, "total_fragments": 758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus constellatus subsp. constellatus", "strain": "strain=CCUG 24889", "accession": "GCA_023167545.1", "taxid": 184246, "species_taxid": 76860, "relation_to_type": "type", "validated": true, "ani": 79.2402, "matched_fragments": 137, "total_fragments": 758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus anginosus", "strain": "strain=NCTC10713", "accession": "GCA_900636475.1", "taxid": 1328, "species_taxid": 1328, "relation_to_type": "type", "validated": true, "ani": 79.0713, "matched_fragments": 149, "total_fragments": 758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus australis", "strain": "strain=ATCC 700641", "accession": "GCA_000186465.1", "taxid": 113107, "species_taxid": 113107, "relation_to_type": "type", "validated": true, "ani": 79.0286, "matched_fragments": 116, "total_fragments": 758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus chosunense", "strain": "strain=ChDC B353", "accession": "GCA_003626515.1", "taxid": 2707003, "species_taxid": 2707003, "relation_to_type": "type", "validated": true, "ani": 78.7867, "matched_fragments": 137, "total_fragments": 758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus xiaochunlingii", "strain": "strain=E24", "accession": "GCA_006385805.1", "taxid": 2589788, "species_taxid": 2589788, "relation_to_type": "type", "validated": true, "ani": 78.7691, "matched_fragments": 132, "total_fragments": 758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus anginosus", "strain": "strain=ATCC 33397", "accession": "GCA_002088025.1", "taxid": 1328, "species_taxid": 1328, "relation_to_type": "type", "validated": true, "ani": 78.6425, "matched_fragments": 141, "total_fragments": 758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus vulneris", "strain": "strain=DM3B3", "accession": "GCA_019218685.1", "taxid": 2853160, "species_taxid": 2853160, "relation_to_type": "type", "validated": true, "ani": 78.5324, "matched_fragments": 138, "total_fragments": 758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus anginosus", "strain": "strain=SK52", "accession": "GCA_000214555.2", "taxid": 1328, "species_taxid": 1328, "relation_to_type": "type", "validated": true, "ani": 78.4773, "matched_fragments": 138, "total_fragments": 758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus saliviloxodontae", "strain": "strain=DSM 27513", "accession": "GCA_016908655.1", "taxid": 1349416, "species_taxid": 1349416, "relation_to_type": "type", "validated": true, "ani": 78.3421, "matched_fragments": 83, "total_fragments": 758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus equi subsp. ruminatorum", "strain": "strain=CECT 5772", "accession": "GCA_000706805.1", "taxid": 254358, "species_taxid": 1336, "relation_to_type": "type", "validated": true, "ani": 78.0007, "matched_fragments": 73, "total_fragments": 758, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_001708305.1", "gtdb_species": "s__Streptococcus himalayensis", "ani": 100.0, "matched_fragments": 755, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_001623565.1", "gtdb_species": "s__Streptococcus marmotae", "ani": 88.7297, "matched_fragments": 305, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017639855.1", "gtdb_species": "s__Streptococcus sp013623465", "ani": 87.0731, "matched_fragments": 276, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.97", "min_intra_species_ani": "99.93", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.98", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_003595525.1", "gtdb_species": "s__Streptococcus respiraculi", "ani": 83.8473, "matched_fragments": 240, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001921845.1", "gtdb_species": "s__Streptococcus cuniculi", "ani": 80.1439, "matched_fragments": 215, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004570575.1", "gtdb_species": "s__Streptococcus cuniculi_A", "ani": 79.7423, "matched_fragments": 225, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000314795.2", "gtdb_species": "s__Streptococcus sp000314795", "ani": 79.2558, "matched_fragments": 129, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900459125.1", "gtdb_species": "s__Streptococcus constellatus", "ani": 79.0956, "matched_fragments": 135, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.83", "min_intra_species_ani": "96.57", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.81", "num_clustered_genomes": 32, "status": "-" }, { "accession": "GCF_900636475.1", "gtdb_species": "s__Streptococcus anginosus", "ani": 79.0712, "matched_fragments": 148, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.16", "min_intra_species_ani": "95.41", "mean_intra_species_af": "0.84", "min_intra_species_af": "0.78", "num_clustered_genomes": 79, "status": "-" }, { "accession": "GCA_000223255.2", "gtdb_species": "s__Streptococcus infantis_G", "ani": 79.0269, "matched_fragments": 129, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001560895.1", "gtdb_species": "s__Streptococcus mitis_Q", "ani": 79.0215, "matched_fragments": 151, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.95", "min_intra_species_ani": "95.95", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001073085.1", "gtdb_species": "s__Streptococcus pseudopneumoniae_M", "ani": 78.9878, "matched_fragments": 138, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.77", "min_intra_species_ani": "95.77", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_016648925.1", "gtdb_species": "s__Streptococcus sp900766505", "ani": 78.9039, "matched_fragments": 126, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.2991, "mean_intra_species_ani": "95.66", "min_intra_species_ani": "95.35", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.83", "num_clustered_genomes": 30, "status": "-" }, { "accession": "GCA_905221145.1", "gtdb_species": "s__Streptococcus sp905221145", "ani": 78.8897, "matched_fragments": 136, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_000430305.1", "gtdb_species": "s__Streptococcus mitis_AW", "ani": 78.7527, "matched_fragments": 131, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0354, "mean_intra_species_ani": "95.13", "min_intra_species_ani": "95.13", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_002096815.1", "gtdb_species": "s__Streptococcus mitis_AD", "ani": 78.7302, "matched_fragments": 136, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_905221505.1", "gtdb_species": "s__Streptococcus sp905221505", "ani": 78.7211, "matched_fragments": 136, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_001072375.1", "gtdb_species": "s__Streptococcus pseudopneumoniae_L", "ani": 78.6502, "matched_fragments": 123, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.33", "min_intra_species_ani": "95.22", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.86", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_905221255.1", "gtdb_species": "s__Streptococcus sp905221255", "ani": 78.6018, "matched_fragments": 125, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.55", "min_intra_species_ani": "97.53", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_001347015.1", "gtdb_species": "s__Streptococcus pneumoniae_E", "ani": 78.5976, "matched_fragments": 145, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_905221155.1", "gtdb_species": "s__Streptococcus sp905221155", "ani": 78.5609, "matched_fragments": 139, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003943815.1", "gtdb_species": "s__Streptococcus cristatus_F", "ani": 78.4817, "matched_fragments": 153, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008369405.1", "gtdb_species": "s__Streptococcus cristatus_G", "ani": 78.4384, "matched_fragments": 148, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001811505.1", "gtdb_species": "s__Streptococcus sp001811505", "ani": 78.3202, "matched_fragments": 136, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_015256435.1", "gtdb_species": "s__Streptococcus sp015256435", "ani": 78.2209, "matched_fragments": 82, "total_fragments": 758, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }