{ "type": "genome", "identifier": "GCF_001870435.1", "organism": "Pseudomonas costantinii", "title": "Pseudomonas costantinii", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Ottawa Research and Development Center", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001870435.1", "bioproject": "PRJNA224116", "biosample": "SAMN05559687", "wgs_master": "MDDR00000000.1", "refseq_category": "na", "taxid": "168469", "species_taxid": "168469", "organism_name": "Pseudomonas costantinii", "infraspecific_name": "strain=LMG 22119", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/11/07", "asm_name": "ASM187043v1", "asm_submitter": "Ottawa Research and Development Center", "gbrs_paired_asm": "GCA_001870435.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/870/435/GCF_001870435.1_ASM187043v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7247216", "genome_size_ungapped": "7247216", "gc_percent": "59.500000", "replicon_count": "0", "scaffold_count": "66", "contig_count": "66", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001870435.1-RS_2024_08_11", "annotation_date": "2024-08-11", "total_gene_count": "6598", "protein_coding_gene_count": "6408", "non_coding_gene_count": "117", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-11-07", "dateModified": "2016-11-07", "datePublished": "2016-11-07", "_annotation": { "sample_count": 1, "sample_organism": [ "Pseudomonas costantinii" ], "sample_taxid": [ "168469" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"strain=SWRI126", "accession": "GCA_014268375.2", "taxid": 2745514, "species_taxid": 2745514, "relation_to_type": "type", "validated": true, "ani": 87.5559, "matched_fragments": 1563, "total_fragments": 2384, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas yamanorum", "strain": "strain=LMG 27247", "accession": "GCA_900105735.1", "taxid": 515393, "species_taxid": 515393, "relation_to_type": "suspected-type", "validated": true, "ani": 86.891, "matched_fragments": 1675, "total_fragments": 2384, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas trivialis", "strain": "strain=DSM 14937", "accession": "GCA_001439805.1", "taxid": 200450, "species_taxid": 200450, "relation_to_type": "type", "validated": true, "ani": 86.8103, "matched_fragments": 1356, "total_fragments": 2384, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas spelaei", "strain": "strain=CCM 7893", "accession": 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