{ "type": "genome", "identifier": "GCF_001870675.1", "organism": "Roseinatronobacter thiooxidans", "title": "Roseinatronobacter thiooxidans", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Institute of Microbiology CAS", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001870675.1", "bioproject": "PRJNA224116", "biosample": "SAMN05717330", "wgs_master": "MEHT00000000.1", "refseq_category": "reference genome", "taxid": "121821", "species_taxid": "121821", "organism_name": "Roseinatronobacter thiooxidans", "infraspecific_name": "strain=ALG1", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/11/07", "asm_name": "ASM187067v1", "asm_submitter": "Institute of Microbiology CAS", "gbrs_paired_asm": "GCA_001870675.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/870/675/GCF_001870675.1_ASM187067v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3504907", "genome_size_ungapped": "3504805", "gc_percent": "60.500000", "replicon_count": "0", "scaffold_count": "50", "contig_count": "50", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001870675.1-RS_2024_05_03", "annotation_date": "2024-05-03", "total_gene_count": "3399", "protein_coding_gene_count": "3313", "non_coding_gene_count": "46", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-11-07", "dateModified": "2016-11-07", "datePublished": "2016-11-07", "_annotation": { "sample_count": 1, "sample_organism": [ "Roseinatronobacter thiooxidans" ], "sample_taxid": [ "121821" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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95, "status": "below_threshold" }, { "organism_name": "Rhodobaca bogoriensis", "strain": "strain=DSM 18756", "accession": "GCA_004366635.1", "taxid": 119542, "species_taxid": 119542, "relation_to_type": "suspected-type", "validated": true, "ani": 82.4679, "matched_fragments": 785, "total_fragments": 1142, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobaca barguzinensis", "strain": "strain=alga05", "accession": "GCA_001870665.2", "taxid": 441209, "species_taxid": 441209, "relation_to_type": "suspected-type", "validated": true, "ani": 82.4593, "matched_fragments": 789, "total_fragments": 1142, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhabdonatronobacter sediminivivens", "strain": "strain=IM2376", "accession": "GCA_013415485.1", "taxid": 2743469, "species_taxid": 2743469, "relation_to_type": "type", "validated": true, "ani": 78.2156, "matched_fragments": 392, "total_fragments": 1142, "ani_threshold": 95, "status": 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