{ "type": "genome", "identifier": "GCF_001907195.1", "organism": "Pontibacter flavimaris", "title": "Pontibacter flavimaris", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Agricultural Culture Collection of China (ACCC), Institute of Agricultural Resources and Regional Planning", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001907195.1", "bioproject": "PRJNA224116", "biosample": "SAMN04589127", "wgs_master": "LVWA00000000.1", "refseq_category": "reference genome", "taxid": "1797110", "species_taxid": "1797110", "organism_name": "Pontibacter flavimaris", "infraspecific_name": "strain=S10-8", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/12/16", "asm_name": "ASM190719v1", "asm_submitter": "Agricultural Culture Collection of China (ACCC), Institute of Agricultural Resources and Regional Planning", "gbrs_paired_asm": "GCA_001907195.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/907/195/GCF_001907195.1_ASM190719v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4623791", "genome_size_ungapped": "4623791", "gc_percent": "53.500000", "replicon_count": "0", "scaffold_count": "13", "contig_count": "13", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001907195.1-RS_2024_10_22", "annotation_date": "2024-10-22", "total_gene_count": "3959", "protein_coding_gene_count": "3896", "non_coding_gene_count": "49", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-12-16", "dateModified": "2016-12-16", "datePublished": "2016-12-16", "_annotation": { "sample_count": 1, "sample_organism": [ "Pontibacter flavimaris" ], "sample_taxid": [ "1797110" ], 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"below_threshold" }, { "organism_name": "Pontibacter aquaedesilientis", "strain": "strain=JH31", "accession": "GCA_014773225.1", "taxid": 2766980, "species_taxid": 2766980, "relation_to_type": "type", "validated": true, "ani": 78.1569, "matched_fragments": 462, "total_fragments": 1535, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 94.41, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_001907195.1", "gtdb_species": "s__Pontibacter sp001907195", "ani": 100.0, "matched_fragments": 1533, "total_fragments": 1535, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Hymenobacteraceae;g__Pontibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_003054055.1", "gtdb_species": "s__Pontibacter 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