# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_12	LOCUS_00120	sequence01:14942..15568(+)	partial			WP_011707883.1	O-antigen ligase family protein	94.7	48.5	26.2
MGA_25	LOCUS_00250	sequence01:25929..26270(+)	partial			WP_011103544.1	ethanolamine utilization protein	85.8	70.3	53.6
MGA_39	LOCUS_00390	sequence01:44549..44887(-)	frameshift		44901	WP_015704809.1	ABC transporter permease	97.3	29.6	57.8
MGA_40	LOCUS_00400	sequence01:44887..45636(-)	frameshift		44901	WP_000469048.1	ABC transporter permease	99.6	69.0	50.8
MGA_52	LOCUS_00520	sequence01:57375..57653(-)	frameshift		57667	WP_011707770.1	undecaprenyl-diphosphate phosphatase	100.0	33.9	92.4
MGA_53	LOCUS_00530	sequence01:57647..58189(-)	frameshift		57667	WP_011707770.1	undecaprenyl-diphosphate phosphatase	96.7	64.2	88.5
MGA_63	LOCUS_00630	sequence01:70942..71400(+)	frameshift		71364	WP_011707759.1	methyl-accepting chemotaxis protein	92.8	24.4	92.2
MGA_64	LOCUS_00640	sequence01:71397..72674(+)	frameshift		71364	WP_011707759.1	methyl-accepting chemotaxis protein	100.0	73.7	91.3
MGA_199	LOCUS_01990	sequence02:50444..50671(+)	frameshift		50641	WP_011704254.1	CoA-acylating methylmalonate-semialdehyde dehydrogenase	88.0	13.3	74.2
MGA_200	LOCUS_02000	sequence02:50671..51939(+)	frameshift		50641	WP_011704254.1	CoA-acylating methylmalonate-semialdehyde dehydrogenase	100.0	84.7	94.5
MGA_236	LOCUS_02360	sequence02:87249..87710(+)	frameshift		87596	WP_011707755.1	arginine deiminase	73.2	27.6	99.1
MGA_237	LOCUS_02370	sequence02:87619..88458(+)	frameshift		87596	WP_011707755.1	arginine deiminase	100.0	68.7	95.7
MGA_263	LOCUS_02620	sequence02:116688..117974(+)	frameshift		117947	WP_011707734.1	ATP-dependent chaperone ClpB	97.2	48.5	98.8
MGA_264	LOCUS_02630	sequence02:117974..119260(+)	frameshift		117947	WP_011707734.1	ATP-dependent chaperone ClpB	100.0	49.9	97.7
MGA_307	LOCUS_03050	sequence03:13557..13943(+)	partial			WP_206819879.1	YchJ family protein	88.3	74.8	84.1
MGA_368	LOCUS_03660	sequence03:97489..97824(+)	frameshift		97809	WP_000131214.1	isochorismate family cysteine hydrolase YcaC	54.1	28.5	52.5
MGA_369	LOCUS_03670	sequence03:97812..98225(+)	frameshift		97809	WP_010943220.1	isochorismate family cysteine hydrolase YcaC	76.6	50.5	49.1
MGA_377	LOCUS_03750	sequence03:106063..106452(-)	frameshift		106451	WP_011705768.1	AMP-binding protein	99.2	23.1	87.5
MGA_378	LOCUS_03760	sequence03:106449..107726(-)	frameshift		106451	WP_011705768.1	AMP-binding protein	100.0	76.7	92.9
MGA_392	LOCUS_03900	sequence03:120399..121136(-)	frameshift		121153	WP_011707519.1	ABC transporter substrate-binding protein	100.0	64.3	94.3
MGA_393	LOCUS_03910	sequence03:121106..121543(-)	frameshift		121153	WP_011707519.1	ABC transporter substrate-binding protein	89.7	34.1	93.1
MGA_458	LOCUS_04550	sequence04:51875..53053(+)	frameshift		51891	WP_011706335.1	carbamoyltransferase HypF	99.5	48.0	86.9
MGA_465	LOCUS_04620	sequence04:56253..56903(+)	partial			WP_163137047.1	hydrogenase nickel incorporation protein HypB	100.0	59.8	98.1
MGA_504	LOCUS_05010	sequence04:97433..99259(+)	partial			WP_235044884.1	PAS domain S-box protein	61.8	38.5	43.6
MGA_507	LOCUS_05040	sequence04:101785..102234(+)	partial			WP_007248639.1	cyclophilin-like fold protein	66.4	84.6	55.6
MGA_530	LOCUS_05270	sequence04:127102..127845(+)	partial			WP_012602464.1	IS4-like element IS4 family transposase	68.0	37.9	50.6
MGA_534	LOCUS_05300	sequence05:1073..1459(+)	frameshift		1387	WP_039215125.1	small ribosomal subunit biogenesis GTPase RsgA	82.0	30.5	93.3
MGA_535	LOCUS_05310	sequence05:1459..2106(+)	frameshift		1387	WP_039215125.1	small ribosomal subunit biogenesis GTPase RsgA	100.0	62.5	98.1
MGA_572	LOCUS_05680	sequence05:34973..35947(-)	frameshift		35988	WP_011704861.1	N-acetylmuramoyl-L-alanine amidase	80.2	52.4	76.9
MGA_607	LOCUS_06030	sequence05:74729..74944(-)	frameshift		74970	WP_011707250.1	response regulator	100.0	22.0	87.3
MGA_608	LOCUS_06040	sequence05:74869..75699(-)	frameshift		74970	WP_011707250.1	response regulator	89.1	76.2	81.3
MGA_628	LOCUS_06240	sequence05:94433..94864(-)	frameshift		94495	WP_011704824.1	phosphatase PAP2 family protein	86.0	74.1	87.8
MGA_643	LOCUS_06390	sequence06:1..1318(+)	internal_stop_codon	1370..1372(+)		WP_011704348.1	signal recognition particle-docking protein FtsY	80.1	55.5	93.2
MGA_668	LOCUS_06640	sequence06:28635..29075(+)	partial			WP_139685680.1	type II secretion system protein	63.0	56.1	45.5
MGA_681	LOCUS_06770	sequence06:44019..44153(+)	frameshift		44144	WP_011704380.1	Dabb family protein	95.5	39.6	92.9
MGA_682	LOCUS_06780	sequence06:44191..44340(+)	frameshift		44144	WP_011704380.1	Dabb family protein	100.0	46.2	93.9
MGA_781	LOCUS_07770	sequence07:39546..39680(-)	partial			WP_005307156.1	50S ribosomal protein L34	59.1	59.1	100.0
MGA_861	LOCUS_08560	sequence08:22101..22871(-)	frameshift		22903	WP_010941694.1	methyl-accepting chemotaxis protein	97.7	38.8	31.6
MGA_862	LOCUS_08570	sequence08:22766..24364(-)	frameshift		22903	WP_011073766.1	methyl-accepting chemotaxis protein	89.7	76.3	34.6
MGA_890	LOCUS_08850	sequence08:58385..61891(+)	partial			WP_011202618.1	hypothetical protein	28.2	78.1	29.6
MGA_911	LOCUS_09050	sequence09:8690..8995(+)	frameshift		8687	WP_011706068.1	DNA polymerase III subunit gamma/tau	100.0	11.9	88.1
MGA_924	LOCUS_09180	sequence09:18890..21157(+)	frameshift		20872	WP_050513484.1	DNA polymerase II	86.5	80.5	92.4
MGA_925	LOCUS_09190	sequence09:21070..21315(+)	frameshift		20872	WP_050513484.1	DNA polymerase II	100.0	10.0	91.4
MGA_951	LOCUS_09450	sequence09:49952..50854(+)	partial			WP_162470590.1	DMT family transporter	72.3	70.8	27.1
MGA_962	LOCUS_09560	sequence09:58750..59610(+)	frameshift,internal_stop_codon	58680..58682(+),58620..58622(+)	58721	WP_206817517.1	S1-like domain-containing RNA-binding protein	100.0	78.0	85.3
MGA_972	LOCUS_09660	sequence09:64934..>65468(-)	partial			WP_004346778.1	IS3 family transposase	100.0	67.3	75.1
MGA_974	LOCUS_09670	sequence10:369..767(-)	frameshift		337,407	WP_159229444.1	IS3 family transposase	88.6	28.7	73.7
MGA_999	LOCUS_09920	sequence10:27045..27761(+)	frameshift		27674	WP_005301172.1	YgeY family selenium metabolism-linked hydrolase	88.2	51.9	98.1
MGA_1000	LOCUS_09930	sequence10:27683..28261(+)	frameshift		27674	WP_005301172.1	YgeY family selenium metabolism-linked hydrolase	100.0	47.4	97.4
MGA_1005	LOCUS_09980	sequence10:33663..34028(-)	frameshift		34164	WP_011706025.1	selenium cofactor biosynthesis protein YqeC	96.7	41.5	70.1
MGA_1006	LOCUS_09990	sequence10:34147..34341(-)	frameshift		34164	WP_011706025.1	selenium cofactor biosynthesis protein YqeC	92.2	20.9	69.5
MGA_1007	LOCUS_10000	sequence10:34655..35161(+)	partial			WP_206817484.1	molybdenum cofactor cytidylyltransferase	92.9	71.9	69.2
MGA_1016	LOCUS_10090	sequence10:50913..51095(+)	frameshift		50953,50959	WP_011706034.1	xanthine dehydrogenase molybdenum-binding subunit XdhA	75.0	5.8	95.6
MGA_1020	LOCUS_10130	sequence11:370..615(+)	frameshift,internal_stop_codon	265..267(+)	585	WP_011261008.1	oxidoreductase	90.1	28.5	72.6
MGA_1035	LOCUS_10280	sequence11:13716..14534(-)	partial			WP_001004024.1	DNA-binding protein	36.0	40.8	61.2
MGA_1037	LOCUS_10300	sequence11:14885..15253(+)	partial			WP_015705867.1	Arc family DNA-binding protein	49.2	40.4	46.7
MGA_1039	LOCUS_10320	sequence11:16252..23097(-)	partial			WP_206817325.1	hypothetical protein	48.1	52.3	88.3
MGA_1045	LOCUS_10380	sequence11:26272..30162(-)	partial			WP_002214118.1	phage tail protein	50.5	38.1	26.2
MGA_1066	LOCUS_10590	sequence11:46410..46727(-)	partial			WP_000544528.1	phage holin family protein	71.4	74.3	40.0
MGA_1071	LOCUS_10640	sequence11:48950..49279(-)	partial			WP_000002237.1	DUF1364 domain-containing protein	56.0	64.6	51.6
MGA_1077	LOCUS_10700	sequence11:51260..51931(-)	partial			WP_070133977.1	replication protein P	42.2	36.4	41.1
MGA_1096	LOCUS_10890	sequence11:64560..65453(+)	partial			WP_002399578.1	DUF3850 domain-containing protein	24.2	39.1	60.3
MGA_1115	LOCUS_11080	sequence11:85819..86232(-)	frameshift		86240	WP_011706404.1	NAD(P)/FAD-dependent oxidoreductase	100.0	31.9	97.8
MGA_1116	LOCUS_11090	sequence11:86232..87110(-)	frameshift		86240	WP_011706404.1	NAD(P)/FAD-dependent oxidoreductase	99.3	67.4	95.2
MGA_1117	LOCUS_11100	sequence11:87185..87316(-)	frameshift		87414	WP_016351064.1	alpha/beta hydrolase YcfP	100.0	24.0	88.4
MGA_1118	LOCUS_11110	sequence11:87376..87723(-)	frameshift		87414	WP_016351064.1	alpha/beta hydrolase YcfP	89.6	57.5	97.1
MGA_1122	LOCUS_11150	sequence11:92541..92681(-)	partial			WP_011706409.1	DUF808 domain-containing protein	78.3	11.8	75.0
MGA_1136	LOCUS_11280	sequence11:105964..106413(+)	frameshift		106230	WP_011706414.1	DUF6279 family lipoprotein	59.7	31.2	66.3
MGA_1137	LOCUS_11290	sequence11:106361..106822(+)	frameshift		106230	WP_011706414.1	DUF6279 family lipoprotein	98.7	53.0	80.1
MGA_1192	LOCUS_11840	sequence11:170283..171008(+)	frameshift		170993	WP_011074416.1	methyl-accepting chemotaxis protein	98.8	43.6	49.2
MGA_1193	LOCUS_11850	sequence11:171005..171922(+)	frameshift		170996	WP_011706973.1	methyl-accepting chemotaxis protein	99.0	55.3	79.5
MGA_1204	LOCUS_11960	sequence11:184386..184520(+)	frameshift		184508	WP_011705406.1	TetR/AcrR family transcriptional regulator	77.3	17.0	91.2
MGA_1205	LOCUS_11970	sequence11:184598..185005(+)	frameshift		184508	WP_011705406.1	TetR/AcrR family transcriptional regulator	96.3	65.0	79.2
MGA_1227	LOCUS_12190	sequence11:209652..209879(+)	partial			WP_206818347.1	hypothetical protein	96.0	50.3	57.5
MGA_1264	LOCUS_12560	sequence11:254445..255680(-)	internal_stop_codon	255684..255686(-)		WP_011705220.1	cardiolipin synthase	100.0	83.4	90.5
MGA_1265	LOCUS_12570	sequence11:255684..255926(-)	internal_stop_codon	255684..255686(-)		WP_011705220.1	cardiolipin synthase	100.0	16.2	90.0
MGA_1273	LOCUS_12650	sequence11:261017..261259(-)	frameshift		261276	WP_011706444.1	YfcC family protein	100.0	16.3	100.0
MGA_1274	LOCUS_12660	sequence11:261250..262491(-)	frameshift		261276	WP_011706444.1	YfcC family protein	98.3	82.7	95.3
MGA_1281	LOCUS_12730	sequence11:269133..272750(-)	partial			WP_011071006.1	hypothetical protein	33.8	44.5	33.7
MGA_1305	LOCUS_12970	sequence11:289441..290016(-)	partial			WP_013530785.1	glycosyl hydrolase 108 family protein	88.5	65.3	32.9
MGA_1326	LOCUS_13180	sequence11:303531..304244(-)	frameshift		304285	WP_011705514.1	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha	100.0	55.2	93.7
MGA_1327	LOCUS_13190	sequence11:304172..304819(-)	frameshift		304285	WP_011705514.1	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha	82.3	41.3	78.5
MGA_1352	LOCUS_13440	sequence11:332975..333280(-)	frameshift		333366	WP_011705490.1	molybdate ABC transporter substrate-binding protein	99.0	41.3	96.0
MGA_1353	LOCUS_13450	sequence11:333229..333702(-)	frameshift		333366	WP_011705490.1	molybdate ABC transporter substrate-binding protein	71.3	46.3	90.2
MGA_1392	LOCUS_13840	sequence11:383889..384800(+)	partial			WP_162098824.1	hypothetical protein	63.4	80.4	27.9
MGA_1408	LOCUS_14000	sequence11:396741..397259(+)	frameshift		397199	WP_011705319.1	PTS sugar transporter subunit IIA	97.1	65.5	65.3
MGA_1409	LOCUS_14010	sequence11:397244..397507(+)	frameshift		397199	WP_011705319.1	PTS sugar transporter subunit IIA	98.9	33.7	66.3
MGA_1422	LOCUS_14140	sequence11:410539..410877(-)	partial			WP_011705309.1	hypothetical protein	73.2	76.6	54.9
MGA_1483	LOCUS_14750	sequence11:470479..471273(-)	partial			WP_100292664.1	winged helix-turn-helix domain-containing protein	29.5	35.6	42.3
MGA_1484	LOCUS_14760	sequence11:471651..473177(-)	partial			WP_011706289.1	methyl-accepting chemotaxis protein	71.3	65.0	40.9
MGA_1492	LOCUS_14840	sequence11:479790..480248(+)	frameshift		480164	WP_000950478.1	transporter substrate-binding domain-containing protein	65.8	39.1	47.0
MGA_1504	LOCUS_14960	sequence11:490405..491319(+)	partial			WP_010906345.1	radical SAM protein	88.2	37.3	24.2
MGA_1539	LOCUS_15310	sequence11:531717..534098(-)	frameshift		534100	WP_206819469.1	transporter substrate-binding domain-containing protein	98.4	68.2	59.0
MGA_1540	LOCUS_15320	sequence11:534047..535033(-)	frameshift		534100	WP_206819469.1	transporter substrate-binding domain-containing protein	97.0	28.0	61.7
MGA_1594	LOCUS_15860	sequence11:593379..594110(-)	frameshift		594223	WP_011706955.1	succinylglutamate-semialdehyde dehydrogenase	100.0	49.7	93.4
MGA_1595	LOCUS_15870	sequence11:594089..594760(-)	frameshift		594792,594222	WP_011706955.1	succinylglutamate-semialdehyde dehydrogenase	83.0	37.8	83.8
MGA_1633	LOCUS_16250	sequence11:636877..637470(-)	partial			WP_001220164.1	TetR/AcrR family transcriptional regulator	70.1	65.9	27.1
MGA_1660	LOCUS_16520	sequence11:660143..661108(+)	frameshift		661018	WP_011707016.1	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	91.0	61.2	97.3
MGA_1661	LOCUS_16530	sequence11:661105..661575(+)	frameshift		661018	WP_011707016.1	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	100.0	32.7	92.3
MGA_1665	LOCUS_16570	sequence11:663459..664121(+)	frameshift		663448	WP_011707019.1	CNNM family magnesium/cobalt transport protein CorC	100.0	74.8	92.3
MGA_1667	LOCUS_16590	sequence11:665882..666205(-)	frameshift		666255	WP_206818667.1	MerR family transcriptional regulator	97.2	26.5	82.7
MGA_1668	LOCUS_16600	sequence11:666247..667074(-)	frameshift		666255	WP_206818667.1	MerR family transcriptional regulator	98.2	68.7	81.5
MGA_1672	LOCUS_16640	sequence11:671337..671915(+)	partial			WP_043170226.1	sensor domain-containing diguanylate cyclase	98.4	36.9	67.2
MGA_1701	LOCUS_16930	sequence11:700762..701664(+)	frameshift		700640	WP_011707133.1	peptide chain release factor 2	100.0	82.2	93.3
MGA_1712	LOCUS_17040	sequence11:712048..712449(-)	partial			WP_011070822.1	DUF2541 family protein	76.7	73.9	73.5
MGA_1754	LOCUS_17460	sequence11:768696..769367(-)	partial			WP_011704935.1	peptidylprolyl isomerase	65.9	69.3	94.6
MGA_1779	LOCUS_17710	sequence11:791072..798244(-)	partial			WP_011707240.1	retention module-containing protein	99.5	49.5	58.8
MGA_1782	LOCUS_17740	sequence11:801076..802233(+)	frameshift		802230	WP_011707243.1	aminotransferase class V-fold PLP-dependent enzyme	100.0	76.8	92.5
MGA_1783	LOCUS_17750	sequence11:802233..802598(+)	frameshift		802230	WP_011707243.1	aminotransferase class V-fold PLP-dependent enzyme	95.0	23.0	88.7
MGA_1826	LOCUS_18180	sequence11:843192..843593(-)	frameshift		843579	WP_011704726.1	TIGR04211 family SH3 domain-containing protein	97.0	64.2	82.2
MGA_1827	LOCUS_18190	sequence11:843502..843798(-)	frameshift		843579	WP_011704726.1	TIGR04211 family SH3 domain-containing protein	74.5	36.3	95.9
MGA_1851	LOCUS_18430	sequence12:13182..13397(-)	partial			WP_011704202.1	hypothetical protein	100.0	72.6	49.3
MGA_1885	LOCUS_18770	sequence12:43038..44666(+)	frameshift		44657	WP_011704171.1	bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase	99.3	62.7	86.4
MGA_1886	LOCUS_18780	sequence12:44650..44964(+)	frameshift,internal_stop_codon	44962..44964(+)	44657	WP_011704171.1	bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase	97.1	11.8	93.1
MGA_1887	LOCUS_18790	sequence12:45004..45618(+)	internal_stop_codon	44962..44964(+)		WP_011704171.1	bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase	98.0	23.2	87.5
MGA_1889	LOCUS_18800	sequence13:467..856(-)	frameshift		532	WP_176682092.1	IS5-like element IS903B family transposase	82.2	32.9	55.7
MGA_1891	LOCUS_18820	sequence13:1871..2269(+)	frameshift		2300,2230	WP_159229444.1	IS3 family transposase	88.6	28.7	73.7
MGA_1892	LOCUS_18830	sequence13:2266..2889(+)	partial			WP_004346778.1	IS3 family transposase	93.2	72.6	52.8
MGA_1896	LOCUS_18870	sequence13:6319..6738(-)	partial			WP_072086314.1	phage portal protein	79.1	41.4	36.8
MGA_1925	LOCUS_19160	sequence13:43771..44427(+)	partial			WP_162177623.1	TerD family protein	40.8	16.9	49.5
MGA_2010	LOCUS_20000	sequence16:19768..19929(-)	partial			WP_005308036.1	twin-arginine translocase TatA/TatE family subunit	73.6	73.6	79.5
MGA_2020	LOCUS_20100	sequence16:28508..28663(+)	partial			WP_016349126.1	hypothetical protein	52.9	58.7	100.0
MGA_2054	LOCUS_20360	sequence22:337..735(-)	frameshift		305,375	WP_159229444.1	IS3 family transposase	88.6	28.7	73.7
MGA_2060	LOCUS_20420	sequence22:10673..11074(-)	frameshift		10813	WP_011706838.1	AAA family ATPase	64.7	6.9	96.5
MGA_2075	LOCUS_20570	sequence22:27632..28060(-)	partial			WP_011459678.1	N-acetyltransferase	98.6	48.1	36.4
MGA_2098	LOCUS_20790	sequence22:44559..44927(+)	partial			WP_011705613.1	arsenite efflux transporter metallochaperone ArsD	86.1	73.9	68.6
MGA_2128	LOCUS_21090	sequence22:77811..79280(-)	partial			WP_012258559.1	DUF3696 domain-containing protein	49.5	53.4	28.6
MGA_2137	LOCUS_21180	sequence22:86808..87239(-)	partial			WP_226014011.1	class I SAM-dependent methyltransferase	72.0	49.2	45.4
MGA_2141	LOCUS_21220	sequence22:89455..90870(+)	frameshift		90837	WP_011706711.1	efflux RND transporter permease subunit	97.7	43.9	96.5
MGA_2142	LOCUS_21230	sequence22:90885..92603(+)	frameshift		90837	WP_011706711.1	efflux RND transporter permease subunit	100.0	54.5	93.0
MGA_2158	LOCUS_21390	sequence22:109090..109848(+)	partial			WP_011261047.1	polysaccharide biosynthesis protein	100.0	73.0	88.1
MGA_2165	LOCUS_21460	sequence22:117482..117760(-)	frameshift,internal_stop_codon	117248..117250(-),117377..117379(-),117332..117334(-),117254..117256(-)	117499,117502,117295	WP_086004200.1	IS3 family transposase	95.7	22.7	67.0
MGA_2198	LOCUS_21790	sequence22:154459..155658(+)	frameshift		154493	WP_011704712.1	MacB family efflux pump subunit	73.7	45.1	27.4
MGA_2230	LOCUS_22110	sequence22:188721..189137(-)	frameshift		189253	WP_011705375.1	potassium/proton antiporter	100.0	24.0	89.9
MGA_2231	LOCUS_22120	sequence22:189038..190447(-)	frameshift		189256	WP_011705375.1	potassium/proton antiporter	85.7	69.6	84.8
MGA_2262	LOCUS_22430	sequence22:221733..221897(-)	partial			WP_005299261.1	hypothetical protein	100.0	73.0	90.7
MGA_2313	LOCUS_22940	sequence22:284576..287953(+)	frameshift		287572	WP_009968094.1	non-ribosomal peptide synthetase DhbF	87.2	41.1	39.7
MGA_2314	LOCUS_22950	sequence22:287842..288564(+)	frameshift		287572	WP_009968094.1	non-ribosomal peptide synthetase DhbF	94.2	9.5	33.2
MGA_2353	LOCUS_23340	sequence22:325383..326168(-)	frameshift		326248	WP_011706632.1	exopolyphosphatase	99.6	52.4	88.5
MGA_2354	LOCUS_23350	sequence22:326198..326872(-)	frameshift		326248	WP_011706632.1	exopolyphosphatase	93.3	42.1	90.9
MGA_2389	LOCUS_23700	sequence22:366011..366574(-)	partial			WP_011706600.1	nucleoside diphosphate kinase regulator	56.7	80.9	92.5
MGA_2435	LOCUS_24160	sequence22:413546..414007(+)	frameshift		413992	WP_003020682.1	DoxX family protein	100.0	78.1	52.9
MGA_2436	LOCUS_24170	sequence22:414007..414153(+)	frameshift		413992	WP_003020682.1	DoxX family protein	75.0	18.4	61.1
MGA_2471	LOCUS_24520	sequence22:449953..452388(-)	partial			WP_001390260.1	phage tail tape measure protein	78.4	67.2	36.6
MGA_2477	LOCUS_24580	sequence22:455205..456407(-)	partial			WP_005767207.1	phage tail protein	26.5	13.0	47.2
MGA_2478	LOCUS_24590	sequence22:456409..457824(-)	partial			WP_000138756.1	phage tail protein I	31.8	79.2	48.0
MGA_2486	LOCUS_24670	sequence22:463293..463766(-)	partial			WP_004706399.1	Rz-like lysis system protein LysB	39.5	45.3	51.6
MGA_2493	LOCUS_24740	sequence22:466340..466996(-)	frameshift		467022	WP_009897056.1	terminase endonuclease subunit	81.7	77.3	43.8
MGA_2496	LOCUS_24770	sequence22:469185..470075(+)	frameshift		470030	WP_001098452.1	terminase ATPase subunit family protein	97.6	49.1	68.9
MGA_2497	LOCUS_24780	sequence22:469958..470899(+)	frameshift		470030	WP_001098452.1	terminase ATPase subunit family protein	92.3	49.3	66.6
MGA_2499	LOCUS_24800	sequence22:472360..473241(-)	frameshift		473339	WP_013530995.1	DUF4062 domain-containing protein	99.0	84.0	33.1
MGA_2501	LOCUS_24820	sequence22:474477..474839(+)	frameshift		474466,474469	WP_011705912.1	translesion error-prone DNA polymerase V autoproteolytic subunit	95.8	82.1	71.3
MGA_2505	LOCUS_24860	sequence22:478075..479649(-)	frameshift		479651	WP_042654659.1	replication endonuclease	99.4	69.0	81.8
MGA_2506	LOCUS_24870	sequence22:479646..480314(-)	frameshift		479651	WP_150388894.1	replication endonuclease	99.5	28.7	96.8
MGA_2511	LOCUS_24920	sequence22:481451..481711(-)	partial			WP_011705889.1	helix-turn-helix transcriptional regulator	79.1	72.3	69.1
MGA_2525	LOCUS_25060	sequence22:490152..490340(-)	frameshift		490125,490425,490365,490158	WP_001163403.1	IS21-like element IS1326 family helper ATPase IstB	98.4	23.5	55.7
MGA_2526	LOCUS_25070	sequence22:490638..490883(+)	partial			WP_011071638.1	AlpA family phage regulatory protein	72.8	80.0	54.2
MGA_2529	LOCUS_25100	sequence22:494392..494757(+)	partial			WP_003689093.1	hypothetical protein	82.6	55.7	42.0
MGA_2549	LOCUS_25300	sequence22:527388..529034(-)	partial			WP_015703830.1	AAA family ATPase	21.7	20.3	27.7
MGA_2573	LOCUS_25540	sequence22:556612..>557194(-)	partial			WP_004346778.1	IS3 family transposase	100.0	73.4	76.7
MGA_2629	LOCUS_26050	sequence33:47274..48284(-)	partial			WP_011268606.1	Fic family protein	32.7	53.7	30.6
MGA_2633	LOCUS_26090	sequence33:55429..56112(+)	frameshift		56085	WP_011705199.1	diguanylate cyclase	96.5	42.6	58.6
MGA_2634	LOCUS_26100	sequence33:56124..56966(+)	frameshift		56085	WP_011705199.1	diguanylate cyclase	100.0	54.2	53.4
MGA_2641	LOCUS_26170	sequence33:63491..64042(+)	frameshift,internal_stop_codon	63255..63257(+)	63997	WP_011705192.1	OmpA family protein	88.0	45.9	82.6
MGA_2642	LOCUS_26180	sequence33:64039..64527(+)	frameshift		63997	WP_011705192.1	OmpA family protein	100.0	45.6	77.2
MGA_2650	LOCUS_26260	sequence33:72864..77630(-)	partial			WP_048065729.1	DUF3320 domain-containing protein	88.4	73.1	34.7
MGA_2706	LOCUS_26820	sequence33:134707..135402(+)	frameshift		135375	WP_206819545.1	alpha/beta fold hydrolase	96.5	77.2	89.7
MGA_2707	LOCUS_26830	sequence33:135399..135584(+)	frameshift		135375	WP_206819545.1	alpha/beta fold hydrolase	85.2	18.0	90.4
MGA_2725	LOCUS_27010	sequence33:158428..159516(+)	frameshift		159435	WP_011705112.1	MATE family efflux transporter	92.8	71.0	83.6
MGA_2726	LOCUS_27020	sequence33:159423..159839(+)	frameshift		159435	WP_011705112.1	MATE family efflux transporter	97.1	28.3	70.9
MGA_2810	LOCUS_27860	sequence33:250576..251376(-)	frameshift		251375	WP_011705059.1	methyltransferase	100.0	70.8	91.1
MGA_2811	LOCUS_27870	sequence33:251370..251708(-)	frameshift		251375	WP_011705059.1	methyltransferase	88.4	26.1	81.8
MGA_2869	LOCUS_28450	sequence33:305585..307339(+)	partial			WP_011704962.1	methyl-accepting chemotaxis protein	85.4	68.7	81.0
MGA_2910	LOCUS_28860	sequence33:348193..348678(-)	frameshift		348785	WP_011707098.1	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	100.0	43.6	91.9
MGA_2911	LOCUS_28870	sequence33:348588..349301(-)	frameshift		348785	WP_011707098.1	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	72.6	46.6	90.7
MGA_2967	LOCUS_29430	sequence33:412539..413399(-)	frameshift		413419	WP_011707206.1	glutamate--tRNA ligase	100.0	60.7	95.1
MGA_2968	LOCUS_29440	sequence33:413399..413953(-)	frameshift		413419	WP_011707206.1	glutamate--tRNA ligase	96.7	37.8	97.2
MGA_2972	LOCUS_29480	sequence33:418106..418543(+)	partial			WP_011704551.1	tyrosine--tRNA ligase	100.0	34.4	76.6
MGA_3009	LOCUS_29850	sequence33:457750..457965(+)	frameshift		457953	WP_011707647.1	ATP-binding protein	70.4	10.8	72.0
MGA_3010	LOCUS_29860	sequence33:458003..459133(+)	frameshift		457953	WP_011707647.1	ATP-binding protein	100.0	81.2	89.1
MGA_3021	LOCUS_29920	sequence41:1807..2751(+)	frameshift		2664	WP_206819258.1	fimbria/pilus outer membrane usher protein	91.1	33.9	96.2
MGA_3022	LOCUS_29930	sequence41:2682..4283(+)	frameshift		2664	WP_206819258.1	fimbria/pilus outer membrane usher protein	100.0	63.2	97.9
MGA_3055	LOCUS_30260	sequence41:37811..38326(+)	partial			WP_011707475.1	3',5'-cyclic-AMP phosphodiesterase	87.1	54.8	86.6
MGA_3102	LOCUS_30730	sequence41:81475..81975(+)	frameshift		81891	WP_039214012.1	SGNH/GDSL hydrolase family protein	81.3	36.7	75.6
MGA_3103	LOCUS_30740	sequence41:81897..82424(+)	frameshift		81891	WP_039214012.1	SGNH/GDSL hydrolase family protein	100.0	53.0	65.9
MGA_3141	LOCUS_31120	sequence41:121121..121591(+)	internal_stop_codon	121589..121591(+)		WP_011704529.1	LuxR family transcriptional regulator	100.0	60.2	91.7
MGA_3142	LOCUS_31130	sequence41:121592..121903(+)	internal_stop_codon	121589..121591(+)		WP_011704529.1	LuxR family transcriptional regulator	100.0	39.5	83.5
MGA_3153	LOCUS_31240	sequence41:132416..133549(+)	partial			WP_011707364.1	cell envelope integrity protein TolA	30.5	29.7	93.0
MGA_3171	LOCUS_31420	sequence41:149928..151388(-)	frameshift		151387	WP_011707355.1	glycogen debranching protein GlgX	94.0	64.1	95.0
MGA_3172	LOCUS_31430	sequence41:151385..152083(-)	frameshift		151387	WP_011707355.1	glycogen debranching protein GlgX	98.3	32.0	85.1
MGA_3225	LOCUS_31960	sequence41:208167..208400(-)	frameshift		208223	WP_011707291.1	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase	79.2	13.4	98.4
MGA_3241	LOCUS_32120	sequence41:228293..230554(-)	partial			WP_010966202.1	DUF2971 domain-containing protein	17.7	62.2	30.4
MGA_3284	LOCUS_32550	sequence41:271194..272663(-)	partial			WP_011263224.1	GGDEF domain-containing protein	36.0	39.5	34.6
MGA_3299	LOCUS_32700	sequence43:9815..10144(+)	partial			WP_000002237.1	DUF1364 domain-containing protein	55.0	63.5	52.5
MGA_3337	LOCUS_33080	sequence43:54063..54899(-)	partial			WP_011706274.1	YeaH/YhbH family protein	100.0	65.7	98.6
MGA_3353	LOCUS_33240	sequence43:71515..71901(-)	partial			WP_011706317.1	MAPEG family protein	72.7	71.5	41.9
MGA_3379	LOCUS_33500	sequence43:98427..98606(+)	partial			WP_011706115.1	hypothetical protein	67.8	44.9	87.5
MGA_3383	LOCUS_33540	sequence43:103602..104228(-)	frameshift		103616	WP_005480794.1	paraquat-inducible protein A	92.8	46.7	33.3
MGA_3436	LOCUS_34070	sequence43:159110..159319(+)	partial			WP_005300771.1	cbb3-type cytochrome oxidase assembly protein CcoS	73.9	81.0	96.1
MGA_3451	LOCUS_34220	sequence43:173101..173670(+)	partial			WP_011706157.1	ribose ABC transporter permease	98.9	58.3	97.3
MGA_3459	LOCUS_34300	sequence43:180405..181262(-)	frameshift		181263	WP_011706164.1	response regulator	99.3	68.2	66.4
MGA_3460	LOCUS_34310	sequence43:181204..181650(-)	frameshift		181263	WP_011706164.1	response regulator	87.2	31.3	59.2
MGA_3467	LOCUS_34380	sequence43:190361..190768(-)	partial			WP_026080374.1	translation initiation factor IF-3	100.0	74.2	88.9
MGA_3501	LOCUS_34720	sequence43:230596..230763(-)	frameshift		230795	WP_011706055.1	hypothetical protein	100.0	67.5	80.0
MGA_3511	LOCUS_34820	sequence43:240342..241631(+)	partial			WP_011267441.1	diguanylate cyclase	96.0	51.6	28.5
MGA_3537	LOCUS_35060	sequence45:27056..27421(-)	frameshift		27507	WP_206817704.1	electron transfer flavoprotein subunit beta/FixA family protein	99.2	48.2	85.0
MGA_3538	LOCUS_35070	sequence45:27343..27822(-)	frameshift		27507	WP_206817704.1	electron transfer flavoprotein subunit beta/FixA family protein	64.2	39.0	87.3
MGA_3560	LOCUS_35290	sequence45:53153..53383(-)	partial			WP_011705740.1	leucine-responsive transcriptional regulator Lrp	100.0	46.6	98.7
MGA_3561	LOCUS_35300	sequence45:53398..54213(+)	partial			WP_011072305.1	alanine dehydrogenase	99.6	72.8	74.4
MGA_3590	LOCUS_35590	sequence45:81137..81490(+)	partial			WP_011707145.1	DUF3135 domain-containing protein	67.5	69.9	39.2
MGA_3600	LOCUS_35690	sequence45:92738..95710(-)	partial			WP_005477239.1	integrase family protein	56.3	64.6	25.7
MGA_3687	LOCUS_36550	sequence45:190532..191155(-)	frameshift		191160	WP_011705639.1	aminopeptidase PepB	99.5	47.6	90.8
MGA_3688	LOCUS_36560	sequence45:191149..191835(-)	frameshift		191160	WP_011705639.1	aminopeptidase PepB	98.2	51.5	85.7
MGA_3715	LOCUS_36830	sequence45:213589..>216046(-)	partial			WP_070065546.1	enhanced entry virulence factor RtxA	89.0	11.0	26.5
MGA_3729	LOCUS_36960	sequence48:14728..15525(+)	frameshift		15456	WP_011704782.1	RNA polymerase sigma factor RpoD	91.7	39.3	81.1
MGA_3730	LOCUS_36970	sequence48:15525..16583(+)	frameshift		15459	WP_011704782.1	RNA polymerase sigma factor RpoD	100.0	57.0	96.9
MGA_3736	LOCUS_37030	sequence48:22279..22518(+)	partial			WP_017410628.1	ribosome alternative rescue factor ArfA	70.9	77.8	78.6
MGA_3740	LOCUS_37070	sequence48:26085..26825(+)	frameshift		26567	WP_011704793.1	oxidoreductase	70.3	49.0	81.5
MGA_3741	LOCUS_37080	sequence48:26720..27133(+)	frameshift		26567	WP_011704793.1	oxidoreductase	100.0	39.3	82.5
MGA_3908	LOCUS_38750	sequence48:195055..195396(+)	frameshift		195360	WP_011707512.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	93.8	31.0	92.5
MGA_3909	LOCUS_38760	sequence48:195359..196084(+)	frameshift		195360	WP_011707512.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	100.0	70.5	85.9
MGA_3935	LOCUS_39020	sequence49:12942..13865(+)	partial			WP_011228826.1	GGDEF domain-containing protein	56.4	49.7	37.4
MGA_3960	LOCUS_39270	sequence49:38962..41550(+)	frameshift		41466	WP_011073162.1	efflux RND transporter permease subunit	97.0	81.0	50.5
MGA_3961	LOCUS_39280	sequence49:41481..42068(+)	frameshift		41469	WP_011073162.1	efflux RND transporter permease subunit	91.8	17.4	53.6
MGA_3972	LOCUS_39390	sequence49:61441..62109(-)	frameshift		61476	WP_011707564.1	pyruvate dehydrogenase complex transcriptional repressor PdhR	95.5	83.5	94.8
MGA_4003	LOCUS_39700	sequence49:94081..94335(+)	frameshift		94302	WP_206818899.1	penicillin-binding protein activator	88.1	11.7	82.4
MGA_4004	LOCUS_39710	sequence49:94302..95867(+)	frameshift		94302	WP_206818899.1	penicillin-binding protein activator	100.0	82.0	86.6
MGA_4011	LOCUS_39780	sequence49:99278..100273(-)	frameshift		100302	WP_011707596.1	cytochrome bc complex cytochrome b subunit	100.0	81.7	94.3
MGA_4012	LOCUS_39790	sequence49:100174..100494(-)	frameshift		100302	WP_011707596.1	cytochrome bc complex cytochrome b subunit	61.3	16.0	95.4
MGA_4053	LOCUS_40200	sequence49:131362..131520(+)	frameshift		131317	WP_011704452.1	mechanosensitive ion channel family protein	98.1	10.0	60.8
MGA_4129	LOCUS_40920	sequence56:36202..37002(-)	partial			WP_011706491.1	cell division protein DedD	41.4	42.9	86.0
MGA_4162	LOCUS_41250	sequence56:76718..78835(-)	partial			WP_050518129.1	glycosyltransferase	75.2	59.8	50.2
MGA_4238	LOCUS_42010	sequence56:164740..164997(+)	frameshift,internal_stop_codon	164581..164583(+),165170..165172(+)	164576,164976	WP_011261000.1	UDP-N-acetylglucosamine 4,6-dehydratase	91.8	19.7	96.2
MGA_4239	LOCUS_42020	sequence56:164987..165172(+)	frameshift,internal_stop_codon	165170..165172(+)	164976	WP_005459669.1	UDP-N-acetylglucosamine 4,6-dehydratase	98.4	15.2	95.0
