{
    "type": "genome",
    "identifier": "GCF_001908535.1",
    "organism": "Aeromonas veronii bv. veronii",
    "title": "Aeromonas veronii bv. veronii",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Masaryk University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_001908535.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN05860752",
        "wgs_master": "MRZR00000000.1",
        "refseq_category": "na",
        "taxid": "197701",
        "species_taxid": "654",
        "organism_name": "Aeromonas veronii bv. veronii",
        "infraspecific_name": "strain=CCM 4359",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2016/12/19",
        "asm_name": "ASM190853v1",
        "asm_submitter": "Masaryk University",
        "gbrs_paired_asm": "GCA_001908535.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/908/535/GCF_001908535.1_ASM190853v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4511265",
        "genome_size_ungapped": "4511265",
        "gc_percent": "59.000000",
        "replicon_count": "0",
        "scaffold_count": "56",
        "contig_count": "56",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_001908535.1-RS_2024_08_16",
        "annotation_date": "2024-08-16",
        "total_gene_count": "4239",
        "protein_coding_gene_count": "3977",
        "non_coding_gene_count": "132",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2016-12-19",
    "dateModified": "2016-12-19",
    "datePublished": "2016-12-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Aeromonas veronii bv. veronii"
        ],
        "sample_taxid": [
            "197701"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Michigan"
        ],
        "sample_host_location_id": [],
        "data_size": "1.273 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4511265",
        "Number of Sequences": "56",
        "Longest Sequences (bp)": "859027",
        "N50 (bp)": "245067",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "58.9",
        "Number of CDSs": "4197",
        "Average Protein Length": "313.8",
        "Coding Ratio (%)": "87.6",
        "Number of rRNAs": "9",
        "Number of tRNAs": "98",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Aeromonas veronii",
                "strain": "strain=ATCC 35624",
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                "species_taxid": 654,
                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Aeromonas veronii",
                "strain": "strain=CECT 4257",
                "accession": "GCA_000820225.1",
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                "relation_to_type": "type",
                "validated": true,
                "ani": 99.9737,
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                "status": "conclusive"
            },
            {
                "organism_name": "Aeromonas allosaccharophila",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Aeromonas australiensis",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "accession": "GCA_000764645.1",
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                "ani": 93.1101,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Aeromonas fluvialis",
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                "accession": "GCA_000819885.1",
                "taxid": 591962,
                "species_taxid": 591962,
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                "matched_fragments": 1094,
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            },
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                "organism_name": "Aeromonas lacus",
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                "accession": "GCA_000764665.1",
                "taxid": 558884,
                "species_taxid": 558884,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            },
            {
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                "species_taxid": 196024,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudomonas hydrolytica",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudomonas songnenensis",
                "strain": "strain=DSM 27560T",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudomonas songnenensis",
                "strain": "strain=NEAU-ST5-5",
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                "ani": 76.4779,
                "matched_fragments": 96,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudomonas capeferrum",
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            },
            {
                "organism_name": "Halomonas lysinitropha",
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                "accession": "GCF_000820225.1",
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}