{ "type": "genome", "identifier": "GCF_001913155.1", "organism": "Maribacter hydrothermalis", "title": "Maribacter hydrothermalis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Xiamen University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001913155.1", "bioproject": "PRJNA224116", "biosample": "SAMN04633439", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "1836467", "species_taxid": "1836467", "organism_name": "Maribacter hydrothermalis", "infraspecific_name": "strain=T28", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/12/21", "asm_name": "ASM191315v1", "asm_submitter": "Xiamen University", "gbrs_paired_asm": "GCA_001913155.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/913/155/GCF_001913155.1_ASM191315v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4271158", "genome_size_ungapped": "4271158", "gc_percent": "34.500000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001913155.1-RS_2024_10_22", "annotation_date": "2024-10-22", "total_gene_count": "3724", "protein_coding_gene_count": "3653", "non_coding_gene_count": "55", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-12-21", "dateModified": "2016-12-21", "datePublished": "2016-12-21", "_annotation": { "sample_count": 1, "sample_organism": [ "Maribacter hydrothermalis" ], "sample_taxid": [ "1836467" ], "sample_host_organism": [ "missing" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Taiwan: Kueishan Island" ], "sample_host_location_id": [], "data_size": "1.191 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4271158", "Number of Sequences": "1", "Longest Sequences (bp)": "4271158", "N50 (bp)": "4271158", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "34.4", "Number of CDSs": "3665", "Average Protein Length": "347.9", "Coding Ratio (%)": "89.5", "Number of rRNAs": "9", "Number of tRNAs": "41", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Maribacter hydrothermalis", "strain": "strain=T28", "accession": "GCA_001913155.1", "taxid": 1836467, "species_taxid": 1836467, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1422, "total_fragments": 1423, 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"organism_name": "Maribacter caenipelagi", "strain": "strain=CECT 8455", "accession": "GCA_004364175.1", "taxid": 1447781, "species_taxid": 1447781, "relation_to_type": "type", "validated": true, "ani": 81.2955, "matched_fragments": 807, "total_fragments": 1423, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter ulvicola", "strain": "strain=DSM 15366", "accession": "GCA_900155985.1", "taxid": 228959, "species_taxid": 228959, "relation_to_type": "type", "validated": true, "ani": 81.1435, "matched_fragments": 780, "total_fragments": 1423, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter stanieri", "strain": "strain=DSM 19891", "accession": "GCA_900112245.1", "taxid": 440514, "species_taxid": 440514, "relation_to_type": "type", "validated": true, "ani": 80.9021, "matched_fragments": 825, "total_fragments": 1423, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter arcticus", "strain": "strain=DSM 23546", "accession": "GCA_900167935.1", "taxid": 561365, "species_taxid": 561365, "relation_to_type": "type", "validated": true, "ani": 80.5389, "matched_fragments": 735, "total_fragments": 1423, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter orientalis", "strain": "strain=DSM 16471", "accession": "GCA_900109345.1", "taxid": 228957, "species_taxid": 228957, "relation_to_type": "type", "validated": true, "ani": 80.3605, "matched_fragments": 768, "total_fragments": 1423, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter litoralis", "strain": "strain=SDRB-Phe2", "accession": "GCA_003075045.1", "taxid": 2059726, "species_taxid": 2059726, "relation_to_type": "type", "validated": true, "ani": 80.2374, "matched_fragments": 756, "total_fragments": 1423, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Zobellia barbeyronii", "strain": "strain=KMM 6746", "accession": "GCA_018603515.1", 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