{
    "type": "genome",
    "identifier": "GCF_001913265.1",
    "organism": "Corynebacterium diphtheriae bv. gravis",
    "title": "Corynebacterium diphtheriae bv. gravis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Northumbria University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_001913265.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN04099181",
        "wgs_master": "LJXR00000000.1",
        "refseq_category": "na",
        "taxid": "1720349",
        "species_taxid": "1717",
        "organism_name": "Corynebacterium diphtheriae bv. gravis",
        "infraspecific_name": "strain=DSM 44123",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2016/12/21",
        "asm_name": "CdipDSM44123",
        "asm_submitter": "Northumbria University",
        "gbrs_paired_asm": "GCA_001913265.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/913/265/GCF_001913265.1_CdipDSM44123",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2371600",
        "genome_size_ungapped": "2371600",
        "gc_percent": "53.500000",
        "replicon_count": "0",
        "scaffold_count": "28",
        "contig_count": "28",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_001913265.1-RS_2024_04_01",
        "annotation_date": "2024-04-01",
        "total_gene_count": "2282",
        "protein_coding_gene_count": "2134",
        "non_coding_gene_count": "61",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2016-12-21",
    "dateModified": "2016-12-21",
    "datePublished": "2016-12-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Corynebacterium diphtheriae bv. gravis"
        ],
        "sample_taxid": [
            "1720349"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [
            "Not available"
        ],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Not available"
        ],
        "sample_host_location_id": [],
        "data_size": "0.681 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 99.54,
        "contamination": 0.52,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2371600",
        "Number of Sequences": "28",
        "Longest Sequences (bp)": "407932",
        "N50 (bp)": "164585",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "53.5",
        "Number of CDSs": "2214",
        "Average Protein Length": "312.9",
        "Coding Ratio (%)": "87.6",
        "Number of rRNAs": "3",
        "Number of tRNAs": "53",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Corynebacterium diphtheriae",
                "strain": "strain=DSM 44123",
                "accession": "GCA_001913265.1",
                "taxid": 1717,
                "species_taxid": 1717,
                "relation_to_type": "type",
                "validated": true,
                "ani": 100.0,
                "matched_fragments": 774,
                "total_fragments": 776,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Corynebacterium diphtheriae",
                "strain": "strain=NCTC11397",
                "accession": "GCA_001457455.1",
                "taxid": 1717,
                "species_taxid": 1717,
                "relation_to_type": "type",
                "validated": true,
                "ani": 99.9985,
                "matched_fragments": 775,
                "total_fragments": 776,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Corynebacterium diphtheriae",
                "strain": "",
                "accession": "GCA_902809765.1",
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                "relation_to_type": "type",
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                "ani": 99.9985,
                "matched_fragments": 775,
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                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Corynebacterium diphtheriae subsp. diphtheriae",
                "strain": "strain=FDAARGOS_1554",
                "accession": "GCA_020736085.1",
                "taxid": 2315257,
                "species_taxid": 1717,
                "relation_to_type": "type",
                "validated": true,
                "ani": 99.9982,
                "matched_fragments": 775,
                "total_fragments": 776,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Corynebacterium belfantii",
                "strain": "",
                "accession": "GCA_900205605.1",
                "taxid": 2014537,
                "species_taxid": 2014537,
                "relation_to_type": "type",
                "validated": true,
                "ani": 95.0958,
                "matched_fragments": 682,
                "total_fragments": 776,
                "ani_threshold": 95,
                "status": "inconclusive"
            }
        ],
        "cc_result": {
            "completeness": 99.54,
            "contamination": 0.52,
            "strain_heterogeneity": 100.0
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        "gtdb_result": [
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.05",
                "min_intra_species_ani": "95.03",
                "mean_intra_species_af": "0.92",
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                "num_clustered_genomes": 346,
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            },
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_900187135.1",
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            {
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                "mean_intra_species_af": "1.00",
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                "num_clustered_genomes": 8,
                "status": "-"
            },
            {
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            },
            {
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    },
    "_bac2feature": {
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    "_genome_taxon": [
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        "diphtheriae",
        "bv.",
        "gravis"
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}