{ "type": "genome", "identifier": "GCF_001921825.1", "organism": "Streptococcus acidominimus", "title": "Streptococcus acidominimus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Centers for Disease Control and Prevention", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001921825.1", "bioproject": "PRJNA224116", "biosample": "SAMN06174759", "wgs_master": "MSJL00000000.1", "refseq_category": "na", "taxid": "1326", "species_taxid": "1326", "organism_name": "Streptococcus acidominimus", "infraspecific_name": "strain=CCUG 27296", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/12/24", "asm_name": "ASM192182v1", "asm_submitter": "Centers for Disease Control and Prevention", "gbrs_paired_asm": "GCA_001921825.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/921/825/GCF_001921825.1_ASM192182v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2285094", "genome_size_ungapped": "2285094", "gc_percent": "42.500000", "replicon_count": "0", "scaffold_count": "111", "contig_count": "111", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001921825.1-RS_2024_05_17", "annotation_date": "2024-05-17", "total_gene_count": "2131", "protein_coding_gene_count": "1998", "non_coding_gene_count": "49", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-12-24", "dateModified": "2016-12-24", "datePublished": "2016-12-24", "_annotation": { "sample_count": 1, "sample_organism": [ "Streptococcus acidominimus" ], "sample_taxid": [ "1326" ], "sample_host_organism": [ "Bos taurus" ], "sample_host_organism_id": [], "sample_host_disease": [ "missing" ], 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus azizii", "strain": "strain=12-5202", "accession": "GCA_001984715.1", "taxid": 1579424, "species_taxid": 1579424, "relation_to_type": "type", "validated": true, "ani": 81.642, "matched_fragments": 423, "total_fragments": 704, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus marmotae", "strain": "strain=HTS5", "accession": "GCA_001623565.1", "taxid": 1825069, "species_taxid": 1825069, "relation_to_type": "type", "validated": true, "ani": 80.4794, "matched_fragments": 360, "total_fragments": 704, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus parasuis", "strain": "strain=SUT-286", "accession": "GCA_021654455.1", "taxid": 1501662, "species_taxid": 1501662, "relation_to_type": "suspected-type", "validated": true, "ani": 78.2767, "matched_fragments": 140, "total_fragments": 704, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus oriscaviae", "strain": "strain=HKU75", "accession": "GCA_018137985.1", "taxid": 2781599, "species_taxid": 2781599, "relation_to_type": "type", "validated": true, "ani": 78.1159, "matched_fragments": 152, "total_fragments": 704, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus downii", "strain": "strain=CECT 9732", "accession": "GCA_004353325.1", "taxid": 1968889, "species_taxid": 1968889, "relation_to_type": "type", "validated": true, "ani": 78.1028, "matched_fragments": 105, "total_fragments": 704, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus toyakuensis", "strain": "strain=TP1632", "accession": "GCA_024346585.1", "taxid": 2819619, "species_taxid": 2819619, "relation_to_type": "type", "validated": true, "ani": 78.0954, "matched_fragments": 108, "total_fragments": 704, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus constellatus subsp. 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0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Streptococcus", "acidominimus" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }