{
    "type": "genome",
    "identifier": "GCF_001941425.1",
    "organism": "Corynebacterium ammoniagenes DSM 20306",
    "title": "Corynebacterium ammoniagenes DSM 20306",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Bielefeld University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_001941425.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02996495",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "649754",
        "species_taxid": "1697",
        "organism_name": "Corynebacterium ammoniagenes DSM 20306",
        "infraspecific_name": "strain=DSM 20306 = 9.6",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2017/01/10",
        "asm_name": "ASM194142v1",
        "asm_submitter": "Bielefeld University",
        "gbrs_paired_asm": "GCA_001941425.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/941/425/GCF_001941425.1_ASM194142v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2790185",
        "genome_size_ungapped": "2790185",
        "gc_percent": "55.500000",
        "replicon_count": "1",
        "scaffold_count": "1",
        "contig_count": "1",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_001941425.1-RS_2024_03_28",
        "annotation_date": "2024-03-28",
        "total_gene_count": "2547",
        "protein_coding_gene_count": "2455",
        "non_coding_gene_count": "65",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2017-01-10",
    "dateModified": "2017-01-10",
    "datePublished": "2017-01-10",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Corynebacterium ammoniagenes DSM 20306"
        ],
        "sample_taxid": [
            "649754"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: St. Louis Children's Hospital"
        ],
        "sample_host_location_id": [],
        "data_size": "0.794 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 99.54,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2790185",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "2790185",
        "N50 (bp)": "2790185",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "55.5",
        "Number of CDSs": "2529",
        "Average Protein Length": "327.0",
        "Coding Ratio (%)": "88.9",
        "Number of rRNAs": "12",
        "Number of tRNAs": "52",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
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                "organism_name": "Corynebacterium ammoniagenes",
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                "species_taxid": 1697,
                "relation_to_type": "type",
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                "total_fragments": 930,
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            },
            {
                "organism_name": "Corynebacterium ammoniagenes",
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                "species_taxid": 1697,
                "relation_to_type": "type",
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                "ani": 99.9756,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Corynebacterium stationis",
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                "accession": "GCA_001941345.1",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "taxid": 160386,
                "species_taxid": 160386,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.7328,
                "matched_fragments": 631,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Corynebacterium endometrii",
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                "species_taxid": 2488819,
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                "matched_fragments": 156,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Corynebacterium tuberculostearicum",
                "strain": "strain=FDAARGOS_1117",
                "accession": "GCA_016728365.1",
                "taxid": 38304,
                "species_taxid": 38304,
                "relation_to_type": "type",
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                "ani": 78.667,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Corynebacterium camporealensis",
                "strain": "strain=DSM 44610",
                "accession": "GCA_000980815.1",
                "taxid": 161896,
                "species_taxid": 161896,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.6047,
                "matched_fragments": 227,
                "total_fragments": 930,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Corynebacterium camporealensis",
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                "accession": "GCA_000766885.2",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Corynebacterium jeddahense",
                "strain": "strain=JCB",
                "accession": "GCA_000577555.1",
                "taxid": 1414719,
                "species_taxid": 1414719,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 80,
                "total_fragments": 930,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_001941425.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium",
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                "num_clustered_genomes": 5,
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium",
                "ani_circumscription_radius": 95.0,
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                "num_clustered_genomes": 11,
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
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                "accession": "GCF_000550785.1",
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                "accession": "GCF_004795735.1",
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            },
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                "num_clustered_genomes": 2,
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
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    "_genome_taxon": [
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        "ammoniagenes",
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        "20306"
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}