{ "type": "genome", "identifier": "GCF_001955695.1", "organism": "Rhodoferax koreense", "title": "Rhodoferax koreense", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Korea University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001955695.1", "bioproject": "PRJNA224116", "biosample": "SAMN06118135", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "1842727", "species_taxid": "1842727", "organism_name": "Rhodoferax koreense", "infraspecific_name": "strain=DCY-110", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/01/18", "asm_name": "ASM195569v1", "asm_submitter": "Korea University", "gbrs_paired_asm": "GCA_001955695.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/955/695/GCF_001955695.1_ASM195569v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5895641", "genome_size_ungapped": "5895641", "gc_percent": "66.000000", "replicon_count": "3", "scaffold_count": "3", "contig_count": "3", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001955695.1-RS_2024_10_22", "annotation_date": "2024-10-22", "total_gene_count": "5525", "protein_coding_gene_count": "5392", "non_coding_gene_count": "59", "pubmed_id": "28956356" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-01-18", "dateModified": "2017-01-18", "datePublished": "2017-01-18", "_annotation": { "sample_count": 1, "sample_organism": [ "Rhodoferax koreense" ], "sample_taxid": [ "1842727" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "missing" ], "sample_host_location_id": [], 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"GCA_003951285.1", "taxid": 2496117, "species_taxid": 2496117, "relation_to_type": "type", "validated": true, "ani": 80.8569, "matched_fragments": 887, "total_fragments": 1963, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ramlibacter tataouinensis", "strain": "strain=TTB310", "accession": "GCA_000215705.1", "taxid": 94132, "species_taxid": 94132, "relation_to_type": "type", "validated": true, "ani": 80.6756, "matched_fragments": 691, "total_fragments": 1963, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xylophilus rhododendri", "strain": "strain=KACC 21265", "accession": "GCA_009906855.1", "taxid": 2697032, "species_taxid": 2697032, "relation_to_type": "type", "validated": true, "ani": 80.5201, "matched_fragments": 816, "total_fragments": 1963, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hydrogenophaga crocea", "strain": "strain=BA0156", "accession": "GCA_011388215.1", "taxid": 2716225, "species_taxid": 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