{ "type": "genome", "identifier": "GCF_001971705.1", "organism": "Natronorubrum daqingense", "title": "Natronorubrum daqingense", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Heilongjiang Academy", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001971705.1", "bioproject": "PRJNA224116", "biosample": "SAMN05417698", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "588898", "species_taxid": "588898", "organism_name": "Natronorubrum daqingense", "infraspecific_name": "strain=JX313", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/01/26", "asm_name": "ASM197170v1", "asm_submitter": "Heilongjiang Academy", "gbrs_paired_asm": "GCA_001971705.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/971/705/GCF_001971705.1_ASM197170v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "archaea", "genome_size": "3835796", "genome_size_ungapped": "3835796", "gc_percent": "61.500000", "replicon_count": "4", "scaffold_count": "4", "contig_count": "4", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001971705.1-RS_2024_10_22", "annotation_date": "2024-10-22", "total_gene_count": "3787", "protein_coding_gene_count": "3708", "non_coding_gene_count": "54", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-01-26", "dateModified": "2017-01-26", "datePublished": "2017-01-26", "_annotation": { "sample_count": 1, "sample_organism": [ "Natronorubrum daqingense" ], "sample_taxid": [ "588898" ], "sample_host_organism": [ "missing" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "missing" ], 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"strain=ZY19", "accession": "GCA_003977755.1", "taxid": 2675099, "species_taxid": 2675099, "relation_to_type": "type", "validated": true, "ani": 80.4404, "matched_fragments": 725, "total_fragments": 1277, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Natrialba hulunbeirensis", "strain": "strain=JCM 10989", "accession": "GCA_000337575.1", "taxid": 123783, "species_taxid": 123783, "relation_to_type": "type", "validated": true, "ani": 80.0818, "matched_fragments": 588, "total_fragments": 1277, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Natronococcus pandeyae", "strain": "strain=LS1_42", "accession": "GCA_008122205.1", "taxid": 2055836, "species_taxid": 2055836, "relation_to_type": "type", "validated": true, "ani": 80.0644, "matched_fragments": 691, "total_fragments": 1277, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 95.83, "contamination": 4.17, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { 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