{
    "type": "genome",
    "identifier": "GCF_001983935.1",
    "organism": "Fuerstiella marisgermanici",
    "title": "Fuerstiella marisgermanici",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Leibniz-Institute DSMZ German Collection of Microorganisms and Cell Cultures",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_001983935.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN05726332",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "1891926",
        "species_taxid": "1891926",
        "organism_name": "Fuerstiella marisgermanici",
        "infraspecific_name": "strain=NH11",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2017/02/03",
        "asm_name": "ASM198393v1",
        "asm_submitter": "Leibniz-Institute DSMZ German Collection of Microorganisms and Cell Cultures",
        "gbrs_paired_asm": "GCA_001983935.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/983/935/GCF_001983935.1_ASM198393v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "8920478",
        "genome_size_ungapped": "8920478",
        "gc_percent": "56.000000",
        "replicon_count": "1",
        "scaffold_count": "1",
        "contig_count": "1",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_001983935.1-RS_2024_06_16",
        "annotation_date": "2024-06-16",
        "total_gene_count": "6342",
        "protein_coding_gene_count": "6221",
        "non_coding_gene_count": "65",
        "pubmed_id": "28066393"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2017-02-03",
    "dateModified": "2017-02-03",
    "datePublished": "2017-02-03",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Fuerstiella marisgermanici"
        ],
        "sample_taxid": [
            "1891926"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Germany: Neuharlingersiel"
        ],
        "sample_host_location_id": [],
        "data_size": "2.513 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "8920478",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "8920478",
        "N50 (bp)": "8920478",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "55.9",
        "Number of CDSs": "6443",
        "Average Protein Length": "394.3",
        "Coding Ratio (%)": "85.4",
        "Number of rRNAs": "3",
        "Number of tRNAs": "60",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Fuerstiella marisgermanici",
                "strain": "strain=NH11",
                "accession": "GCA_001983935.1",
                "taxid": 1891926,
                "species_taxid": 1891926,
                "relation_to_type": "type",
                "validated": true,
                "ani": 100.0,
                "matched_fragments": 2969,
                "total_fragments": 2973,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Rubinisphaera brasiliensis",
                "strain": "strain=DSM 5305",
                "accession": "GCA_000165715.3",
                "taxid": 119,
                "species_taxid": 119,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.172,
                "matched_fragments": 62,
                "total_fragments": 2973,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Planctomicrobium piriforme",
                "strain": "strain=DSM 26348",
                "accession": "GCA_900113665.1",
                "taxid": 1576369,
                "species_taxid": 1576369,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8546,
                "matched_fragments": 54,
                "total_fragments": 2973,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Maioricimonas rarisocia",
                "strain": "strain=Mal4",
                "accession": "GCA_007747795.1",
                "taxid": 2528026,
                "species_taxid": 2528026,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.5902,
                "matched_fragments": 92,
                "total_fragments": 2973,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rubripirellula lacrimiformis",
                "strain": "strain=K22.7",
                "accession": "GCA_007741535.1",
                "taxid": 1930273,
                "species_taxid": 1930273,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.4843,
                "matched_fragments": 66,
                "total_fragments": 2973,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Crateriforma conspicua",
                "strain": "strain=Mal65",
                "accession": "GCA_007752935.1",
                "taxid": 2527996,
                "species_taxid": 2527996,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.4732,
                "matched_fragments": 53,
                "total_fragments": 2973,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rubinisphaera margarita",
                "strain": "strain=ICM_H10",
                "accession": "GCA_022267515.1",
                "taxid": 2909586,
                "species_taxid": 2909586,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.3382,
                "matched_fragments": 74,
                "total_fragments": 2973,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_001983935.1",
                "gtdb_species": "s__Fuerstia marisgermanicae",
                "ani": 100.0,
                "matched_fragments": 2969,
                "total_fragments": 2973,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__Fuerstia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_014238335.1",
                "gtdb_species": "s__Fuerstia sp014238335",
                "ani": 76.3891,
                "matched_fragments": 249,
                "total_fragments": 2973,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__Fuerstia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003388505.1",
                "gtdb_species": "s__MB-PLM-1 sp003388505",
                "ani": 75.8878,
                "matched_fragments": 55,
                "total_fragments": 2973,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__MB-PLM-1",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.82",
                "min_intra_species_ani": "99.66",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCF_900113665.1",
                "gtdb_species": "s__Planctomicrobium piriforme",
                "ani": 75.8774,
                "matched_fragments": 53,
                "total_fragments": 2973,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__Planctomicrobium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016795145.1",
                "gtdb_species": "s__SXXK01 sp016795145",
                "ani": 75.7759,
                "matched_fragments": 98,
                "total_fragments": 2973,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__SXXK01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015485495.1",
                "gtdb_species": "s__S139-18 sp015485495",
                "ani": 75.774,
                "matched_fragments": 100,
                "total_fragments": 2973,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__S139-18",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016795105.1",
                "gtdb_species": "s__F1-80-MAGs062 sp016795105",
                "ani": 75.7464,
                "matched_fragments": 79,
                "total_fragments": 2973,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__F1-80-MAGs062",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903896675.1",
                "gtdb_species": "s__SXXK01 sp903896675",
                "ani": 75.6051,
                "matched_fragments": 67,
                "total_fragments": 2973,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__SXXK01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.51",
                "min_intra_species_ani": "99.43",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCF_007747795.1",
                "gtdb_species": "s__Maioricimonas rarisocia",
                "ani": 75.5784,
                "matched_fragments": 93,
                "total_fragments": 2973,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__Maioricimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003670925.1",
                "gtdb_species": "s__SXXK01 sp003670925",
                "ani": 75.5721,
                "matched_fragments": 73,
                "total_fragments": 2973,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__SXXK01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_005791255.1",
                "gtdb_species": "s__SXXK01 sp005791255",
                "ani": 75.1842,
                "matched_fragments": 61,
                "total_fragments": 2973,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__SXXK01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.10",
                "min_intra_species_ani": "98.10",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_903924405.1",
                "gtdb_species": "s__SXXK01 sp903924405",
                "ani": 75.1841,
                "matched_fragments": 71,
                "total_fragments": 2973,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__SXXK01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.71",
                "min_intra_species_ani": "99.71",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_013203845.1",
                "gtdb_species": "s__JABMPE01 sp013203845",
                "ani": 75.015,
                "matched_fragments": 67,
                "total_fragments": 2973,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__JABMPE01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_genome_taxon": [
        "Fuerstiella",
        "marisgermanici"
    ],
    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}