# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_36	LOCUS_00360	sequence1:42136..43071(+)	frameshift		42122,42230	WP_002211928.1	type VI secretion system tip protein VgrG	83.9	40.4	33.9
MGA_39	LOCUS_00390	sequence1:44746..46248(+)	partial			WP_004536040.1	DUF2235 domain-containing protein	40.6	22.7	30.9
MGA_81	LOCUS_00810	sequence1:85576..87435(-)	partial			WP_118839700.1	DEAD/DEAH box helicase family protein	87.6	62.1	31.5
MGA_101	LOCUS_01000	sequence1:111886..112260(-)	partial			WP_012639864.1	helix-turn-helix transcriptional regulator	63.7	54.9	38.0
MGA_131	LOCUS_01300	sequence1:139187..139486(+)	partial			WP_010921609.1	IS4-like element ISSfl1 family transposase	86.9	21.1	51.2
MGA_163	LOCUS_01620	sequence1:173455..173949(+)	partial			WP_013094946.1	helix-turn-helix domain-containing protein	100.0	60.3	86.0
MGA_176	LOCUS_01750	sequence1:187092..187664(+)	partial			WP_014830204.1	protein bax	100.0	69.3	93.7
MGA_190	LOCUS_01890	sequence1:203301..203891(+)	partial			WP_013094971.1	ABC-F family ATP-binding cassette domain-containing protein	89.3	38.2	64.1
MGA_203	LOCUS_02020	sequence1:215689..216123(+)	partial			WP_023620076.1	autotransporter domain-containing protein	100.0	62.1	87.5
MGA_232	LOCUS_02310	sequence1:250553..251125(+)	partial			WP_013095014.1	NAD(+) diphosphatase	100.0	73.9	93.2
MGA_315	LOCUS_03120	sequence1:343795..343959(+)	frameshift		343935	WP_013095068.1	MmcQ/YjbR family DNA-binding protein	100.0	46.2	83.3
MGA_316	LOCUS_03130	sequence1:343994..344149(+)	frameshift		343935	WP_013095068.1	MmcQ/YjbR family DNA-binding protein	100.0	43.6	92.2
MGA_336	LOCUS_03330	sequence1:365516..366037(-)	frameshift		365557	WP_087522250.1	IS3-like element IS150 family transposase	92.5	35.1	94.4
MGA_354	LOCUS_03500	sequence1:383045..384829(+)	partial			WP_004536040.1	DUF2235 domain-containing protein	63.8	50.1	25.6
MGA_355	LOCUS_03510	sequence1:384925..385251(+)	partial			WP_013095099.1	DDRRRQL repeat protein YjdP	58.3	57.9	69.8
MGA_380	LOCUS_03740	sequence1:411167..411997(+)	frameshift		411134	WP_087451024.1	IS3-like element ISSen4 family transposase	100.0	74.0	96.0
MGA_382	LOCUS_03760	sequence1:412382..413035(-)	internal_stop_codon	413039..413041(-)		WP_097332203.1	DUF4942 domain-containing protein	94.9	73.6	71.8
MGA_383	LOCUS_03770	sequence1:413039..413227(-)	internal_stop_codon	413039..413041(-)		WP_001280513.1	DUF4942 domain-containing protein	96.8	21.4	63.3
MGA_398	LOCUS_03920	sequence1:419134..419445(-)	partial			WP_007869721.1	hypothetical protein	49.5	57.0	51.9
MGA_401	LOCUS_03950	sequence1:420711..421007(-)	partial			WP_011104526.1	phage tail tape measure protein	55.1	6.0	49.1
MGA_410	LOCUS_04040	sequence1:428607..428783(+)	frameshift		428753	WP_002213014.1	type VI secretion system contractile sheath small subunit	98.3	34.3	75.4
MGA_411	LOCUS_04050	sequence1:428741..429193(-)	internal_stop_codon	429299..429301(-)		WP_025246912.1	IS256-like element ISSoEn2 family transposase	63.3	23.6	88.4
MGA_427	LOCUS_04210	sequence1:446263..446745(-)	frameshift,internal_stop_codon	446924..446926(-)	446914,446818	WP_003642405.1	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	99.4	69.6	41.6
MGA_435	LOCUS_04290	sequence1:452043..452255(-)	frameshift,internal_stop_codon	452043..452045(-)	452033	WP_124999099.1	ISNCY family transposase	95.7	15.0	59.7
MGA_436	LOCUS_04300	sequence1:452305..452604(+)	frameshift		452565	WP_085954962.1	IS3 family transposase	89.9	23.2	98.9
MGA_437	LOCUS_04310	sequence1:452601..453455(+)	frameshift		452565	WP_085954962.1	IS3 family transposase	100.0	74.2	100.0
MGA_439	LOCUS_04330	sequence1:454628..454894(-)	frameshift,internal_stop_codon	454628..454630(-)	455003	WP_091583139.1	IS3 family transposase	100.0	21.5	60.2
MGA_440	LOCUS_04340	sequence1:455001..455327(-)	frameshift		455002,455398	WP_155887481.1	IS3 family transposase	99.1	26.2	52.8
MGA_441	LOCUS_04350	sequence1:455396..455719(-)	frameshift		455398	WP_155887481.1	IS3 family transposase	97.2	24.9	51.9
MGA_454	LOCUS_04480	sequence1:470845..471249(+)	partial			WP_005166950.1	MDR efflux pump AcrAB transcriptional activator RobA	88.1	41.3	54.6
MGA_461	LOCUS_04550	sequence1:480431..480787(+)	frameshift,internal_stop_codon	480801..480803(+)	480778,480815	WP_139860272.1	IS4 family transposase	89.8	22.0	46.2
MGA_465	LOCUS_04590	sequence1:482852..484072(-)	frameshift		484113	WP_004666649.1	IS21-like element ISPsy14 family transposase	99.3	79.8	50.5
MGA_466	LOCUS_04600	sequence1:484663..485019(-)	partial			WP_001303661.1	IS66 family transposase	100.0	25.3	90.7
MGA_469	LOCUS_04630	sequence1:486471..486683(+)	partial			WP_011114738.1	transposase	95.7	41.4	68.7
MGA_564	LOCUS_05580	sequence1:588836..588994(+)	partial			WP_001223210.1	type II toxin-antitoxin system antitoxin ChpS	100.0	62.7	67.3
MGA_565	LOCUS_05590	sequence1:588988..589350(+)	partial			WP_000239579.1	endoribonuclease toxin ChpB	73.3	75.9	84.1
MGA_625	LOCUS_06190	sequence1:652606..653436(+)	frameshift		652573	WP_087451024.1	IS3-like element ISSen4 family transposase	100.0	74.0	96.0
MGA_633	LOCUS_06270	sequence1:661499..661969(-)	partial			WP_013095762.1	hypothetical protein	99.4	69.5	78.7
MGA_634	LOCUS_06280	sequence1:662210..662407(+)	partial			WP_042894353.1	antirestriction protein	98.5	39.8	76.6
MGA_653	LOCUS_06470	sequence1:678917..680869(-)	partial			WP_000443951.1	5-methylcytosine-specific restriction endonuclease subunit McrB	44.6	63.0	44.3
MGA_683	LOCUS_06770	sequence1:711820..712314(-)	frameshift		712339	WP_015704239.1	restriction endonuclease subunit S	85.4	31.4	27.9
MGA_684	LOCUS_06780	sequence1:712283..712552(-)	frameshift		712342	WP_015704239.1	restriction endonuclease subunit S	71.9	13.0	43.9
MGA_766	LOCUS_07600	sequence1:795123..796064(+)	internal_stop_codon	796062..796064(+)		WP_001219580.1	two-component system sensor histidine kinase CreC	99.7	65.8	77.6
MGA_767	LOCUS_07610	sequence1:796245..796547(+)	internal_stop_codon	796062..796064(+)		WP_015704331.1	two-component system sensor histidine kinase CreC	100.0	21.1	72.0
MGA_807	LOCUS_08010	sequence1:844473..847943(-)	partial			WP_002211638.1	autotransporter adhesin YapH	96.9	29.1	26.7
MGA_857	LOCUS_08510	sequence1:907153..908214(-)	frameshift		908123	WP_013095587.1	type II secretion system protein GspE	91.5	70.2	91.0
MGA_1020	LOCUS_10120	sequence1:1078856..1079746(+)	partial			WP_013095957.1	replication protein	64.5	46.0	69.4
MGA_1023	LOCUS_10150	sequence1:1081427..1082056(+)	partial			WP_000445450.1	hypothetical protein	59.8	77.0	34.9
MGA_1027	LOCUS_10190	sequence1:1083091..1083792(-)	partial			WP_010889129.1	hypothetical protein	74.2	64.6	37.0
MGA_1038	LOCUS_10300	sequence1:1089765..1089980(+)	partial			WP_071667929.1	hypothetical protein	77.5	52.9	43.6
MGA_1042	LOCUS_10340	sequence1:1091323..1092951(+)	partial			WP_000204763.1	PBSX family phage terminase large subunit	46.1	53.1	35.7
MGA_1066	LOCUS_10580	sequence1:1110090..1111229(+)	partial			WP_001681975.1	hypothetical protein	43.5	32.8	64.8
MGA_1073	LOCUS_10650	sequence1:1117599..1117856(+)	partial			WP_005173445.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	96.5	70.7	93.9
MGA_1106	LOCUS_10980	sequence1:1140731..1141273(-)	partial			WP_089600859.1	IS3 family transposase	100.0	47.1	96.1
MGA_1116	LOCUS_11080	sequence1:1151602..1152132(-)	partial			WP_001029486.1	two-domain cob(I)yrinic acid a,c-diamide adenosyltransferase PduO	94.9	49.7	49.1
MGA_1119	LOCUS_11110	sequence1:1153692..1154120(-)	partial			WP_011388668.1	heme-binding protein	90.1	74.0	46.1
MGA_1126	LOCUS_11180	sequence1:1160335..1160748(+)	internal_stop_codon	1160746..1160748(+)		WP_014971748.1	IS5-like element ISKpn26 family transposase	100.0	42.0	99.3
MGA_1127	LOCUS_11190	sequence1:1160758..1161315(+)	internal_stop_codon	1160746..1160748(+)		WP_000019441.1	IS5-like element ISKpn26 family transposase	100.0	56.7	98.9
MGA_1128	LOCUS_11200	sequence1:1161354..1161698(-)	partial			WP_015705975.1	dihydrodipicolinate synthase family protein	68.4	26.5	60.3
MGA_1133	LOCUS_11250	sequence1:1164960..1165136(-)	partial			WP_001214248.1	recombinase family protein	86.2	21.6	54.0
MGA_1138	LOCUS_11300	sequence1:1168602..1168952(+)	partial			WP_000772650.1	tyrosine-type recombinase/integrase	100.0	29.2	59.3
MGA_1141	LOCUS_11330	sequence1:1169513..1169782(-)	partial			WP_010714182.1	VRR-NUC domain-containing protein	87.6	72.6	48.7
MGA_1146	LOCUS_11380	sequence1:1170898..1172271(-)	frameshift		1172273	WP_002399687.1	DNA polymerase	97.2	62.8	32.7
MGA_1154	LOCUS_11460	sequence1:1175967..1177031(+)	partial			WP_001280050.1	type VI secretion system tube protein TssD	18.4	16.5	73.8
MGA_1324	LOCUS_13160	sequence1:1356993..1358087(-)	partial			WP_001280050.1	type VI secretion system tube protein TssD	41.2	34.5	45.5
MGA_1326	LOCUS_13180	sequence1:1358840..1358986(+)	internal_stop_codon	1358984..1358986(+)		WP_000149473.1	IS3 family transposase	100.0	47.1	85.4
MGA_1327	LOCUS_13190	sequence1:1359048..1359557(+)	internal_stop_codon	1358984..1358986(+)		WP_085954962.1	IS3 family transposase	97.0	42.8	88.4
MGA_1366	LOCUS_13580	sequence1:1407062..1407322(-)	partial			WP_010906025.1	SDR family oxidoreductase	98.8	32.0	43.5
MGA_1435	LOCUS_14270	sequence1:1481677..1481958(-)	partial			WP_029882131.1	fluoride efflux transporter CrcB	100.0	73.2	94.6
MGA_1510	LOCUS_15010	sequence1:1566149..1567402(+)	partial			WP_202694179.1	cell envelope integrity protein TolA	30.7	30.3	87.5
MGA_1711	LOCUS_17010	sequence1:1785486..1785746(+)	partial			WP_013097313.1	anti-virulence regulator CigR family protein	100.0	49.1	91.9
MGA_1850	LOCUS_18400	sequence1:1939616..1940644(-)	partial			WP_000094396.1	hybrid-cluster NAD(P)-dependent oxidoreductase	98.8	53.4	25.3
MGA_1882	LOCUS_18720	sequence1:1968242..1968715(+)	partial			WP_001006993.1	NUMOD4 domain-containing protein	61.8	60.8	44.0
MGA_1893	LOCUS_18830	sequence1:1975760..1976590(+)	frameshift		1975727	WP_087451024.1	IS3-like element ISSen4 family transposase	100.0	74.0	96.0
MGA_1959	LOCUS_19490	sequence1:2035263..2036162(+)	frameshift		2036126	WP_015704982.1	type VI secretion system tip protein VgrG	96.3	34.4	72.2
MGA_1960	LOCUS_19500	sequence1:2036122..2037777(+)	frameshift		2036126	WP_015704982.1	type VI secretion system tip protein VgrG	99.5	65.6	77.0
MGA_1963	LOCUS_19530	sequence1:2040639..2041022(+)	frameshift		2040956	WP_015704985.1	hypothetical protein	83.5	46.5	67.9
MGA_1964	LOCUS_19540	sequence1:2041007..2041348(+)	frameshift		2040956	WP_015704985.1	hypothetical protein	97.3	46.1	70.0
MGA_1966	LOCUS_19560	sequence1:2041605..2042306(+)	frameshift		2042303	WP_015704987.1	hypothetical protein	99.6	58.1	42.2
MGA_1967	LOCUS_19570	sequence1:2042339..2042980(+)	frameshift		2042303	WP_015704987.1	hypothetical protein	63.8	33.7	63.2
MGA_1977	LOCUS_19670	sequence1:2054540..2056423(-)	partial			WP_011204227.1	methyl-accepting chemotaxis protein	52.0	63.0	49.1
MGA_2097	LOCUS_20870	sequence1:2179551..2180033(+)	partial			WP_013096964.1	LuxR C-terminal-related transcriptional regulator	98.8	73.8	56.3
MGA_2175	LOCUS_21650	sequence1:2253379..2253849(-)	partial			WP_015705244.1	maltose/glucose-specific PTS transporter subunit IIBC	99.4	29.2	87.1
MGA_2178	LOCUS_21680	sequence1:2256018..2256848(+)	frameshift		2255985	WP_087451024.1	IS3-like element ISSen4 family transposase	100.0	74.0	96.0
MGA_2186	LOCUS_21760	sequence1:2262938..2263435(-)	partial			WP_200831647.1	lysozyme inhibitor LprI family protein	100.0	65.2	100.0
MGA_2189	LOCUS_21790	sequence1:2266077..2267243(-)	partial			WP_015705244.1	maltose/glucose-specific PTS transporter subunit IIBC	97.2	71.1	86.5
MGA_2213	LOCUS_22030	sequence1:2294292..2295122(-)	frameshift		2295154	WP_087451024.1	IS3-like element ISSen4 family transposase	100.0	74.0	96.0
MGA_2254	LOCUS_22440	sequence1:2336183..2336473(-)	partial			WP_005173442.1	SgcJ/EcaC family oxidoreductase	93.8	68.7	73.3
MGA_2259	LOCUS_22490	sequence1:2339359..2339679(+)	partial			WP_013530654.1	transcriptional regulator GcvA	90.6	31.4	40.6
MGA_2269	LOCUS_22590	sequence1:2350432..2351025(-)	frameshift		2351023	WP_013096797.1	DmsA/YnfE/YnfF family dimethyl sulfoxide reductase	99.0	24.0	91.8
MGA_2270	LOCUS_22600	sequence1:2350988..2352871(-)	frameshift		2351023	WP_013096797.1	DmsA/YnfE/YnfF family dimethyl sulfoxide reductase	98.1	75.7	95.0
MGA_2357	LOCUS_23470	sequence1:2442488..2444143(+)	frameshift		2444038	WP_000052468.1	Ig-like domain-containing protein	92.6	35.0	59.5
MGA_2358	LOCUS_23480	sequence1:2444050..2460492(+)	frameshift,internal_stop_codon	2457846..2457848(+)	2457920,2453506,2451746,2444038,2457781,2456983,2457017,2453531,2444092,2451709	WP_000052484.1	Ig-like domain-containing protein	99.9	79.4	59.6
MGA_2361	LOCUS_23510	sequence1:2464057..2464398(-)	partial			WP_013096689.1	hypothetical protein	100.0	38.4	82.3
MGA_2364	LOCUS_23540	sequence1:2467108..2467311(-)	internal_stop_codon	2467357..2467359(-)		WP_013096685.1	epoxyqueuosine reductase QueH	100.0	30.2	88.1
MGA_2365	LOCUS_23550	sequence1:2467357..2467776(-)	internal_stop_codon	2467357..2467359(-)		WP_013096685.1	epoxyqueuosine reductase QueH	100.0	62.6	97.1
MGA_2449	LOCUS_24390	sequence1:2550403..2551026(+)	frameshift		2550939	WP_013096598.1	alpha/beta hydrolase	86.5	54.1	94.4
MGA_2450	LOCUS_24400	sequence1:2551023..2551397(+)	frameshift		2550939	WP_013096598.1	alpha/beta hydrolase	100.0	37.5	95.2
MGA_2460	LOCUS_24500	sequence1:2558430..2558843(+)	partial			WP_010940937.1	multidrug effflux MFS transporter	78.1	26.0	30.8
MGA_2487	LOCUS_24770	sequence1:2588790..2591024(-)	partial			WP_226992670.1	EF-hand domain-containing protein	20.4	14.0	42.4
MGA_2496	LOCUS_24860	sequence1:2599178..2600995(+)	partial			WP_011055862.1	cellulose synthase XcsA	94.2	68.5	24.4
MGA_2501	LOCUS_24910	sequence1:2605668..2608337(+)	partial			WP_109982246.1	response regulator	64.9	60.6	40.1
MGA_2557	LOCUS_25460	sequence1:2668659..2669141(+)	partial			WP_004543544.1	L-2-amino-thiazoline-4-carboxylic acid hydrolase	94.4	35.4	68.2
MGA_2607	LOCUS_25960	sequence1:2722136..2722438(+)	frameshift		2722411	WP_000847532.1	YbjP/YqhG family protein	87.0	52.3	36.3
MGA_2608	LOCUS_25970	sequence1:2722435..2722629(+)	frameshift		2722411	WP_000847532.1	YbjP/YqhG family protein	90.6	33.1	48.3
MGA_2609	LOCUS_25980	sequence1:2723263..2724033(-)	partial			WP_012546260.1	glycosyltransferase family 9 protein	84.4	60.1	31.7
MGA_2618	LOCUS_26070	sequence1:2733013..2733849(+)	internal_stop_codon	2733847..2733849(+)		WP_013096462.1	porin OmpS2	100.0	75.3	94.6
MGA_2619	LOCUS_26080	sequence1:2733859..2734122(+)	internal_stop_codon	2733847..2733849(+)		WP_013096462.1	porin OmpS2	100.0	23.6	96.6
MGA_2625	LOCUS_26140	sequence1:2737983..2738222(-)	internal_stop_codon	2738229..2738231(-)		WP_001246498.1	cyclic diguanylate phosphodiesterase	77.2	12.0	65.6
MGA_2626	LOCUS_26150	sequence1:2738229..2738624(-)	internal_stop_codon	2738229..2738231(-)		WP_012602364.1	cyclic diguanylate phosphodiesterase	100.0	28.8	69.2
MGA_2627	LOCUS_26160	sequence1:2738821..2739126(-)	partial			WP_010920993.1	cupin domain-containing protein	92.1	74.0	43.6
MGA_2642	LOCUS_26310	sequence1:2754643..2755665(+)	internal_stop_codon	2755663..2755665(+)		WP_013096422.1	aldose 1-epimerase family protein	100.0	84.6	90.3
MGA_2677	LOCUS_26660	sequence1:2795365..2795856(-)	internal_stop_codon	2795965..2795967(-)		WP_013096380.1	crotonase/enoyl-CoA hydratase family protein	100.0	56.4	95.1
MGA_2678	LOCUS_26670	sequence1:2795965..2796234(-)	internal_stop_codon	2795965..2795967(-)		WP_013096380.1	crotonase/enoyl-CoA hydratase family protein	100.0	30.8	95.5
MGA_2699	LOCUS_26880	sequence1:2814453..2815283(-)	frameshift		2815315	WP_087451024.1	IS3-like element ISSen4 family transposase	100.0	74.0	96.0
MGA_2701	LOCUS_26900	sequence1:2815716..2817185(+)	partial			WP_001291561.1	tyrosine-type recombinase/integrase	40.3	54.1	29.3
MGA_2706	LOCUS_26950	sequence1:2820490..2822610(-)	partial			WP_010938783.1	tape measure protein	28.5	21.0	34.6
MGA_2749	LOCUS_27380	sequence1:2863235..2863594(+)	partial			WP_029883447.1	YchJ family protein	87.4	68.4	90.4
MGA_2789	LOCUS_27780	sequence1:2909913..2910215(-)	frameshift,internal_stop_codon	2909912..2909914(-)	2910184,2910239	WP_149367117.1	hypothetical protein	89.0	56.3	89.9
MGA_2790	LOCUS_27790	sequence1:2910222..2910419(-)	frameshift		2910184,2910239	WP_149367117.1	hypothetical protein	73.8	30.4	91.7
MGA_2791	LOCUS_27800	sequence1:2910621..2910887(-)	frameshift		2910638	WP_013096220.1	hypothetical protein	94.3	51.9	73.5
MGA_2793	LOCUS_27820	sequence1:2911357..2912712(-)	partial			WP_013096205.1	RHS repeat-associated core domain-containing protein	63.6	22.8	76.9
MGA_2796	LOCUS_27850	sequence1:2914143..2915216(-)	frameshift		2915350	WP_013096205.1	RHS repeat-associated core domain-containing protein	60.8	14.8	92.2
MGA_2797	LOCUS_27860	sequence1:2915544..2915759(-)	frameshift,internal_stop_codon	2915913..2915915(-),2915568..2915570(-),2915880..2915882(-),2915856..2915858(-)	2915606	WP_143346860.1	competence protein ComJ	78.9	37.5	73.3
MGA_2815	LOCUS_28040	sequence1:2939119..2939661(-)	partial			WP_004526753.1	type VI secretion system Vgr family protein	94.4	15.2	43.2
MGA_2819	LOCUS_28080	sequence1:2941324..2941728(-)	partial			WP_000976553.1	Rap1a/Tai family immunity protein	68.7	35.4	37.0
MGA_2835	LOCUS_28240	sequence1:2961823..2962968(+)	partial			WP_000065894.1	Hcp1 family type VI secretion system effector	55.6	53.8	55.2
MGA_2837	LOCUS_28260	sequence1:2963719..2964009(+)	frameshift		2963695	WP_013096169.1	helix-turn-helix domain-containing protein	64.6	28.8	55.3
MGA_2869	LOCUS_28580	sequence1:2997107..2997994(+)	partial			WP_038419892.1	L-serine ammonia-lyase	93.6	60.8	96.4
MGA_2870	LOCUS_28590	sequence1:2997924..2998094(-)	partial			WP_013096122.1	DNA-binding transcriptional regulator KdgR	100.0	21.3	96.4
MGA_2966	LOCUS_29550	sequence1:3095999..3096991(-)	partial			WP_013096347.1	hypothetical protein	53.3	57.5	81.8
MGA_2972	LOCUS_29610	sequence1:3102871..3103284(-)	partial			WP_011072896.1	Lambda phage lipoprotein	75.2	72.9	40.6
MGA_2992	LOCUS_29810	sequence1:3118433..3119263(-)	frameshift		3119295	WP_087451024.1	IS3-like element ISSen4 family transposase	100.0	74.0	96.0
MGA_3009	LOCUS_29980	sequence1:3128525..3129451(-)	partial			WP_000054512.1	hypothetical protein	57.8	55.5	67.4
MGA_3011	LOCUS_30000	sequence1:3129861..3130331(-)	frameshift		3129944,3129826	WP_000526669.1	protein YmfL	94.2	80.5	27.3
MGA_3027	LOCUS_30160	sequence1:3138673..3139476(+)	frameshift		3138592	WP_201996915.1	IS3 family transposase	100.0	70.6	98.9
MGA_3029	LOCUS_30180	sequence1:3139697..3145432(-)	partial			WP_011090812.1	DUF4011 domain-containing protein	30.4	33.4	42.5
MGA_3030	LOCUS_30190	sequence1:3145619..3147661(-)	partial			WP_040066179.1	DUF262 domain-containing protein	17.4	19.7	35.2
MGA_3031	LOCUS_30200	sequence1:3147654..3149105(-)	partial			WP_012870224.1	DUF262 domain-containing protein	46.6	42.5	28.0
MGA_3032	LOCUS_30210	sequence1:3149130..3149807(-)	frameshift		3150040	WP_085929673.1	IS3-like element ISEc52 family transposase	100.0	57.8	99.6
MGA_3034	LOCUS_30230	sequence1:3150355..3150552(-)	partial			WP_001132230.1	IS3 family transposase	96.9	67.0	98.4
MGA_3036	LOCUS_30250	sequence1:3151095..3155771(-)	partial			WP_002288736.1	DNA helicase RecQ	22.5	54.1	36.5
MGA_3037	LOCUS_30260	sequence1:3155768..3156697(-)	partial			WP_012259053.1	DNA-processing protein DprA	83.5	70.6	35.1
MGA_3038	LOCUS_30270	sequence1:3156941..3157234(-)	partial			WP_000089821.1	IS1 family transposase	100.0	58.1	92.8
MGA_3074	LOCUS_30630	sequence1:3193282..3196374(-)	partial			WP_157768866.1	glycosyltransferase	75.0	56.2	26.4
MGA_3075	LOCUS_30640	sequence1:3196677..3200315(-)	partial			WP_157768866.1	glycosyltransferase	67.2	57.7	37.5
MGA_3129	LOCUS_31180	sequence1:3257932..3258150(-)	partial			WP_000373724.1	type II toxin-antitoxin system PemK/MazF family toxin	88.9	58.2	87.5
MGA_3131	LOCUS_31200	sequence1:3258783..3259907(-)	partial			WP_000065894.1	Hcp1 family type VI secretion system effector	56.4	53.8	65.9
MGA_3190	LOCUS_31780	sequence1:3324068..3325471(-)	partial			WP_011706692.1	nucleoside-diphosphate sugar epimerase/dehydratase	99.4	70.2	63.8
MGA_3192	LOCUS_31800	sequence1:3325993..3326553(-)	partial			WP_003704933.1	NeuD/PglB/VioB family sugar acetyltransferase	98.4	44.6	38.9
MGA_3193	LOCUS_31810	sequence1:3326546..3327280(-)	partial			WP_003113413.1	glycosyltransferase family 4 protein	97.1	68.7	46.8
MGA_3243	LOCUS_32310	sequence1:3388646..3388840(+)	frameshift		3388822	WP_015704509.1	membrane protein	81.2	34.4	52.8
MGA_3247	LOCUS_32350	sequence1:3390752..3391582(-)	frameshift		3391614	WP_087451024.1	IS3-like element ISSen4 family transposase	100.0	74.0	96.0
MGA_3249	LOCUS_32370	sequence1:3391885..3393555(+)	partial			WP_005170186.1	YadA C-terminal domain-containing protein	20.9	54.7	43.1
MGA_3250	LOCUS_32380	sequence1:3393864..3394325(+)	partial			WP_015706081.1	hypothetical protein	45.1	48.9	72.5
MGA_3279	LOCUS_32670	sequence1:3426167..3426478(+)	partial			WP_005480579.1	site-specific integrase	96.1	20.7	46.5
MGA_3338	LOCUS_33260	sequence1:3485060..3485890(-)	frameshift		3485922	WP_087451024.1	IS3-like element ISSen4 family transposase	100.0	74.0	96.0
MGA_3394	LOCUS_33820	sequence1:3551896..3552567(-)	partial			WP_029881734.1	transcriptional regulator LrhA	100.0	71.5	92.8
MGA_3457	LOCUS_34450	sequence1:3614527..3616314(-)	partial			WP_004536040.1	DUF2235 domain-containing protein	10.9	7.4	41.5
MGA_3479	LOCUS_34670	sequence1:3635926..3638571(-)	partial			WP_011105367.1	hypothetical protein	57.8	73.0	28.5
MGA_3500	LOCUS_34880	sequence1:3664984..3666519(-)	partial			WP_038420302.1	EAL domain-containing protein	99.2	69.5	86.6
MGA_3513	LOCUS_35000	sequence1:3678820..3679221(-)	partial			WP_013098196.1	cell division protein ZipA	100.0	40.5	100.0
MGA_3560	LOCUS_35470	sequence1:3727560..3728615(+)	frameshift		3728447	WP_013098236.1	leucyl aminopeptidase family protein	84.0	62.6	82.1
MGA_3561	LOCUS_35480	sequence1:3728540..3728977(+)	frameshift		3728447	WP_013098236.1	leucyl aminopeptidase family protein	100.0	30.7	95.9
MGA_3702	LOCUS_36870	sequence1:3882008..3882838(+)	frameshift		3881975	WP_087451024.1	IS3-like element ISSen4 family transposase	100.0	74.0	96.0
MGA_3708	LOCUS_36930	sequence1:3889904..3890311(-)	partial			WP_061278980.1	helix-turn-helix transcriptional regulator	84.4	69.1	37.4
MGA_3728	LOCUS_37130	sequence1:3910351..3910791(+)	partial			WP_000101723.1	integrase	70.5	24.9	97.1
MGA_3729	LOCUS_37140	sequence1:3910882..3911391(+)	partial			WP_013096029.1	Hcp family type VI secretion system effector	73.4	77.5	83.9
MGA_3734	LOCUS_37190	sequence1:3913264..3913824(+)	partial			WP_011028430.1	YceI family protein	65.1	41.0	28.1
MGA_3815	LOCUS_38000	sequence1:4001093..4002469(-)	partial			WP_160029978.1	Ig-like domain-containing protein	93.4	34.2	29.9
MGA_3818	LOCUS_38030	sequence1:4003706..4004560(+)	partial			WP_002216044.1	LysR family transcriptional regulator	28.5	26.7	43.2
MGA_3824	LOCUS_38090	sequence1:4008288..4008896(-)	partial			WP_011030355.1	TIR domain-containing protein	68.8	79.0	28.9
MGA_3825	LOCUS_38100	sequence1:4009095..4009484(+)	partial			WP_011815736.1	ATP-binding protein	74.4	69.6	60.4
MGA_3833	LOCUS_38180	sequence1:4015499..4016137(-)	partial			WP_011815728.1	site-specific integrase	83.0	43.1	40.9
MGA_3916	LOCUS_39010	sequence1:4111885..4112007(+)	partial			WP_013098555.1	YgdI/YgdR family lipoprotein	100.0	55.6	97.5
MGA_3941	LOCUS_39260	sequence1:4138964..4139398(-)	frameshift,internal_stop_codon	4139246..4139248(-)	4139260	WP_013087234.1	tyrosine-type recombinase/integrase	37.5	16.6	57.4
MGA_3942	LOCUS_39270	sequence1:4139623..4140051(-)	partial			WP_106646099.1	SIR2 family protein	88.0	11.9	32.0
MGA_3979	LOCUS_39640	sequence1:4166601..4167143(-)	partial			WP_004526753.1	type VI secretion system Vgr family protein	88.9	14.9	36.7
MGA_3984	LOCUS_39690	sequence1:4169754..4170479(-)	partial			WP_000557907.1	5-methylcytosine-specific endonuclease McrA	54.4	50.9	37.6
MGA_3998	LOCUS_39830	sequence1:4183974..4184855(-)	frameshift		4184997	WP_095908218.1	peptide chain release factor 2	100.0	80.3	98.6
MGA_4036	LOCUS_40210	sequence1:4225192..4226604(+)	frameshift		4226571	WP_013095624.1	outer membrane usher protein	87.2	47.1	37.4
MGA_4037	LOCUS_40220	sequence1:4226655..4227773(+)	frameshift		4226571	WP_002210844.1	fimbrial biogenesis outer membrane usher protein	95.4	40.7	32.7
MGA_4040	LOCUS_40250	sequence1:4230556..4238814(+)	partial			WP_013098820.1	contact-dependent inhibition effector 16S rRNA endonuclease	46.7	37.6	26.7
MGA_4076	LOCUS_40610	sequence1:4272947..4273255(-)	partial			WP_013098695.1	LuxR C-terminal-related transcriptional regulator	100.0	58.3	90.2
MGA_4100	LOCUS_40850	sequence1:4297645..4298673(-)	partial			WP_038420579.1	YgiQ family radical SAM protein	98.5	46.4	96.7
MGA_4102	LOCUS_40870	sequence1:4299307..4302582(-)	partial			WP_004291481.1	P-loop NTPase fold protein	43.7	43.2	21.4
MGA_4112	LOCUS_40970	sequence1:4309730..4310161(-)	frameshift		4310394	WP_085929673.1	IS3-like element ISEc52 family transposase	88.1	32.4	96.8
MGA_4115	LOCUS_41000	sequence1:4311432..4312637(+)	internal_stop_codon	4312635..4312637(+)		WP_000080200.1	IS66-like element ISEc23 family transposase	97.0	73.7	79.0
MGA_4116	LOCUS_41010	sequence1:4312668..4313024(+)	internal_stop_codon	4312635..4312637(+)		WP_001303661.1	IS66 family transposase	100.0	25.3	89.0
MGA_4117	LOCUS_41020	sequence1:4313224..4313499(-)	partial			WP_013087108.1	copper resistance system metallochaperone PcoE	100.0	63.2	90.1
MGA_4119	LOCUS_41040	sequence1:4314535..4315764(-)	partial			WP_038420579.1	YgiQ family radical SAM protein	95.8	54.1	98.5
MGA_4143	LOCUS_41280	sequence1:4341426..4342172(+)	frameshift		4342118	WP_010976026.1	integrase core domain-containing protein	90.3	57.4	39.1
MGA_4144	LOCUS_41290	sequence1:4342157..4342558(+)	frameshift		4342106	WP_010723086.1	IS481-like element ISEc19 family transposase	96.2	33.3	36.4
MGA_4179	LOCUS_41640	sequence1:4376477..4377070(+)	frameshift		4376932	WP_013098798.1	phage portal protein	49.7	28.5	95.9
MGA_4180	LOCUS_41650	sequence1:4377058..4377615(+)	frameshift		4376932	WP_040233361.1	phage portal protein	97.8	52.3	85.6
MGA_4196	LOCUS_41810	sequence1:4389935..4390297(-)	frameshift		4390338	WP_011269148.1	S-type pyocin domain-containing protein	95.8	17.9	55.7
MGA_4197	LOCUS_41820	sequence1:4390336..4391391(-)	partial			WP_013096824.1	S-type pyocin domain-containing protein	100.0	62.1	73.5
MGA_4201	LOCUS_41860	sequence1:4393950..4394420(-)	frameshift		4394476	WP_013098820.1	contact-dependent inhibition effector 16S rRNA endonuclease	51.3	2.5	75.0
MGA_4202	LOCUS_41870	sequence1:4394468..4394872(-)	frameshift		4394476	WP_013098820.1	contact-dependent inhibition effector 16S rRNA endonuclease	98.5	5.4	55.9
MGA_4203	LOCUS_41880	sequence1:4395505..4395657(+)	internal_stop_codon	4395316..4395318(+)		WP_013095401.1	SymE family type I addiction module toxin	98.0	32.5	83.7
MGA_4205	LOCUS_41900	sequence1:4396060..4397070(-)	partial			WP_206782626.1	DNA/RNA non-specific endonuclease	52.4	23.5	44.4
MGA_4206	LOCUS_41910	sequence1:4397055..4397708(-)	partial			WP_013098821.1	ShlB/FhaC/HecB family hemolysin secretion/activation protein	96.8	37.5	85.2
MGA_4223	LOCUS_42080	sequence1:4415803..4416447(+)	partial			WP_000291399.1	DsbA family protein	65.0	48.4	47.5
MGA_4284	LOCUS_42690	sequence1:4485552..4486154(-)	partial			WP_013098912.1	lipoprotein NlpI	100.0	68.0	98.5
MGA_4488	LOCUS_44710	sequence1:4680831..4681049(-)	partial			WP_038420743.1	hypothetical protein	97.2	47.1	70.8
MGA_4508	LOCUS_44910	sequence1:4702226..4702711(+)	partial			WP_038420751.1	DNA utilization protein GntX	100.0	70.9	79.5
MGA_4541	LOCUS_45240	sequence1:4743674..4744384(+)	frameshift		4744324	WP_013099180.1	SDR family NAD(P)-dependent oxidoreductase	93.6	83.7	95.5
MGA_4542	LOCUS_45250	sequence1:4744473..4744910(-)	partial			WP_015706124.1	bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase	82.1	63.0	50.4
MGA_4570	LOCUS_45530	sequence1:4776972..4778426(-)	frameshift		4778569	WP_000351437.1	transposase	100.0	68.5	99.4
MGA_4571	LOCUS_45540	sequence1:4778510..4779094(-)	frameshift		4778566	WP_000351437.1	transposase	99.5	27.2	93.3
MGA_4572	LOCUS_45550	sequence1:4779081..4779569(-)	partial			WP_000090707.1	TnsA endonuclease N-terminal domain-containing protein	100.0	57.9	100.0
MGA_4608	LOCUS_45910	sequence1:4825539..4826531(-)	partial			WP_011970096.1	glycosyl hydrolase family 8	74.2	73.5	38.3
MGA_4773	LOCUS_47500	sequence1:5022819..5023448(+)	partial			WP_015704292.1	VENN motif pre-toxin domain-containing protein	96.2	45.6	59.9
MGA_4864	LOCUS_48390	sequence2:13311..14600(+)	partial			WP_015368251.1	peptidoglycan glycosyltransferase FtsI	97.7	71.1	54.4
MGA_4866	LOCUS_48410	sequence2:15571..16227(-)	internal_stop_codon	16285..16287(-)		WP_000085552.1	IS3 family transposase	97.2	82.1	70.3
MGA_4867	LOCUS_48420	sequence2:16356..16520(-)	internal_stop_codon	16560..16562(-)		WP_000636388.1	transposase	100.0	39.7	83.3
MGA_4868	LOCUS_48430	sequence2:16560..16751(-)	frameshift,internal_stop_codon	16284..16286(-),16560..16562(-)	16403	WP_085955172.1	IS3 family transposase	85.7	13.4	72.2
MGA_4872	LOCUS_48470	sequence2:20692..21237(-)	partial			WP_020479965.1	plasmid pRiA4b ORF-3 family protein	56.4	49.6	33.3
MGA_4879	LOCUS_48540	sequence2:25388..26020(-)	partial			WP_010948486.1	acyltransferase family protein	97.1	31.0	44.6
MGA_4917	LOCUS_48920	sequence2:54815..55381(+)	partial			WP_000761698.1	DUF5983 family protein	50.0	59.9	42.3
MGA_4926	LOCUS_49010	sequence2:64885..65169(-)	partial			WP_000578648.1	plasmid IncI1-type surface exclusion protein ExcA	95.7	45.1	41.3
MGA_4942	LOCUS_49170	sequence2:79258..82800(-)	partial			WP_001141540.1	DUF5710 domain-containing protein	55.4	51.5	47.6
MGA_4957	LOCUS_49320	sequence2:97065..97973(-)	partial			WP_000752782.1	type 4b pilus protein PilO2	98.0	68.2	45.5
MGA_4960	LOCUS_49350	sequence2:100499..101305(-)	partial			WP_001360287.1	type IV pilus biogenesis lipoprotein PilL	97.4	73.2	48.7
MGA_4963	LOCUS_49380	sequence2:102839..103336(-)	partial			WP_000213862.1	conjugal transfer protein TraC	92.1	70.9	40.4
MGA_4964	LOCUS_49390	sequence2:103745..104017(-)	partial			WP_001372168.1	transcription termination/antitermination NusG family protein	98.9	50.3	52.8