# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_53	LOCUS_00520	sequence01:53947..54303(-)	partial			WP_005488983.1	DUF2850 domain-containing protein	47.5	37.1	44.6
MGA_99	LOCUS_00970	sequence01:112523..112957(-)	frameshift		112943	WP_000081498.1	RNA polymerase sigma factor RpoS	93.8	40.9	80.7
MGA_100	LOCUS_00980	sequence01:112935..113504(-)	frameshift		112949	WP_005393877.1	RNA polymerase sigma factor RpoS	99.5	58.2	75.9
MGA_133	LOCUS_01310	sequence01:146153..146398(+)	partial			WP_001235990.1	DUF1107 domain-containing protein	70.4	83.8	61.4
MGA_268	LOCUS_02660	sequence02:17590..18195(+)	partial			WP_005168613.1	4'-phosphopantetheinyl transferase	82.1	69.9	43.1
MGA_281	LOCUS_02790	sequence02:40920..41411(+)	frameshift		41348	WP_011705836.1	amonabactin ABC transporter ATP-binding protein	85.9	52.4	58.6
MGA_282	LOCUS_02800	sequence02:41374..41715(+)	frameshift		41348	WP_011705836.1	amonabactin ABC transporter ATP-binding protein	94.7	40.1	69.2
MGA_301	LOCUS_02990	sequence02:62145..62654(-)	frameshift		62668	WP_011964141.1	deoxyribodipyrimidine photo-lyase	89.9	28.9	55.9
MGA_302	LOCUS_03000	sequence02:62576..63715(-)	frameshift		62671	WP_000411504.1	deoxyribodipyrimidine photo-lyase	90.8	68.8	57.6
MGA_312	LOCUS_03100	sequence02:71892..75347(+)	partial			WP_011071149.1	PAS domain S-box protein	61.9	38.1	29.3
MGA_326	LOCUS_03240	sequence02:88598..90841(-)	partial			WP_003114559.1	phosphodiesterase DipA	56.8	46.9	38.0
MGA_356	LOCUS_03540	sequence02:118810..119376(+)	frameshift		118747	WP_061013680.1	AraC family ligand binding domain-containing protein	58.0	51.7	33.0
MGA_360	LOCUS_03580	sequence02:121657..121815(-)	partial			WP_005163637.1	YoaH family protein	69.2	42.4	72.2
MGA_368	LOCUS_03660	sequence03:3872..4252(-)	partial			WP_005479095.1	magnesium transporter	65.9	29.9	51.2
MGA_447	LOCUS_04450	sequence03:100955..101962(-)	partial			WP_000608692.1	sphingomyelin phosphodiesterase	91.3	45.4	34.8
MGA_448	LOCUS_04460	sequence03:102114..104381(-)	partial			WP_109982246.1	response regulator	68.9	52.9	41.3
MGA_466	LOCUS_04640	sequence04:7465..11211(+)	partial			WP_003112465.1	diguanylate cyclase	58.3	66.1	36.1
MGA_481	LOCUS_04790	sequence04:23501..26077(-)	partial			WP_005764775.1	EAL domain-containing protein	49.8	52.8	34.4
MGA_499	LOCUS_04970	sequence04:42787..44544(-)	partial			WP_011070706.1	EAL domain-containing protein	72.5	28.5	33.0
MGA_500	LOCUS_04980	sequence04:44541..46430(-)	partial			WP_014626536.1	PAS domain S-box protein	75.0	64.2	31.8
MGA_503	LOCUS_05010	sequence04:48050..50308(+)	partial			WP_011105092.1	EAL domain-containing protein	56.1	33.2	41.3
MGA_531	LOCUS_05290	sequence04:88028..88762(-)	partial			WP_005481502.1	hypothetical protein	57.8	64.7	46.8
MGA_534	LOCUS_05320	sequence04:90191..90448(+)	partial			WP_003087752.1	glutathione S-transferase N-terminal domain-containing protein	96.5	66.7	47.6
MGA_536	LOCUS_05340	sequence04:91655..91813(+)	partial			WP_001142947.1	type VI secretion system effector Hcp-2	100.0	30.2	92.3
MGA_546	LOCUS_05440	sequence04:102935..103891(+)	partial			WP_003120367.1	hypothetical protein	37.4	36.2	46.7
MGA_547	LOCUS_05450	sequence04:103893..104849(+)	partial			WP_003120367.1	hypothetical protein	37.4	36.2	46.7
MGA_559	LOCUS_05570	sequence04:118094..119689(-)	partial			WP_099799131.1	EAL domain-containing protein	58.0	36.7	36.2
MGA_599	LOCUS_05960	sequence05:35313..36053(-)	partial			WP_005458569.1	DNA-binding domain-containing protein	72.8	73.8	31.2
MGA_694	LOCUS_06900	sequence06:47313..48413(-)	partial			WP_011074089.1	sensor domain-containing diguanylate cyclase	39.3	29.1	34.7
MGA_719	LOCUS_07150	sequence07:462..860(-)	partial			WP_014207583.1	gamma-glutamylcyclotransferase	72.7	84.1	43.8
MGA_853	LOCUS_08470	sequence08:61949..64663(-)	partial			WP_011974897.1	DUF2339 domain-containing protein	37.7	35.6	29.5
MGA_857	LOCUS_08510	sequence08:70247..70384(-)	internal_stop_codon	70247..70249(-)		WP_002679544.1	integron integrase	100.0	10.3	60.0
MGA_858	LOCUS_08520	sequence08:70377..70655(-)	internal_stop_codon	70247..70249(-)		WP_011072111.1	integron integrase	96.7	27.9	53.9
MGA_863	LOCUS_08570	sequence08:74320..75015(-)	frameshift		74343	WP_011816033.1	IS110-like element ISYen1 family transposase	95.2	64.9	49.5
MGA_872	LOCUS_08660	sequence08:81052..82155(+)	partial			WP_010903265.1	pentapeptide repeat-containing protein	80.1	57.7	24.4
MGA_890	LOCUS_08840	sequence09:3442..4326(+)	partial			WP_011268012.1	site-specific DNA-methyltransferase	59.9	51.7	48.7
MGA_951	LOCUS_09450	sequence09:60244..60789(-)	partial			WP_005466625.1	single-stranded DNA-binding protein	59.1	60.8	86.9
MGA_966	LOCUS_09600	sequence10:3990..5606(+)	partial			WP_013525363.1	PleD family two-component system response regulator	34.4	57.2	35.6
MGA_967	LOCUS_09610	sequence10:5670..6170(-)	partial			WP_016352339.1	META domain-containing protein	59.6	72.7	32.7
MGA_1005	LOCUS_09990	sequence10:45959..47695(+)	partial			WP_013095325.1	ATP-dependent endonuclease	65.2	64.2	25.8
MGA_1008	LOCUS_10020	sequence10:49259..49558(+)	internal_stop_codon	49556..49558(+)		WP_000027427.1	ISAs1-like element ISEc26 family transposase	86.9	22.1	46.5
MGA_1009	LOCUS_10030	sequence10:49643..50386(+)	internal_stop_codon	49556..49558(+)		WP_000027427.1	ISAs1-like element ISEc26 family transposase	100.0	63.6	50.8
MGA_1028	LOCUS_10220	sequence10:66122..66886(-)	partial			WP_005458814.1	CoA pyrophosphatase	63.0	80.4	43.1
MGA_1067	LOCUS_10610	sequence11:3..395(+)	partial			WP_000073137.1	thioredoxin-disulfide reductase	96.2	39.3	84.0
MGA_1096	LOCUS_10900	sequence11:28962..31604(-)	partial			WP_172625954.1	AraC family transcriptional regulator	17.2	12.8	35.1
MGA_1122	LOCUS_11160	sequence11:58278..58883(+)	partial			WP_005464933.1	glucosamine-6-phosphate deaminase	98.5	74.4	85.4
MGA_1156	LOCUS_11490	sequence12:30299..30994(+)	partial			WP_000136719.1	signal recognition particle-docking protein FtsY	100.0	59.3	83.6
MGA_1168	LOCUS_11610	sequence12:40411..42390(+)	partial			WP_000212116.1	type VI secretion system tip protein TssI/VgrG	93.8	53.1	60.2
MGA_1192	LOCUS_11850	sequence12:63429..63830(-)	frameshift		64052,64012	WP_032468650.1	ComF family protein	96.2	44.8	50.0
MGA_1216	LOCUS_12090	sequence12:89528..90085(+)	partial			WP_011172862.1	TRAP transporter small permease subunit	46.5	50.6	34.9
MGA_1223	LOCUS_12160	sequence12:97555..99711(-)	partial			WP_209627475.1	ATP-binding protein	64.6	62.6	24.4
MGA_1237	LOCUS_12300	sequence12:110274..111125(+)	partial			WP_002858148.1	glycosyltransferase	95.1	49.9	31.0
MGA_1240	LOCUS_12330	sequence12:112959..113861(-)	partial			WP_000998260.1	glycosyltransferase	83.7	37.6	33.1
MGA_1242	LOCUS_12350	sequence12:115022..116332(-)	partial			WP_003814055.1	O-antigen ligase family protein	60.3	63.5	21.0
MGA_1320	LOCUS_13130	sequence12:196751..197293(-)	partial			WP_005458139.1	TIGR02444 family protein	69.4	77.8	46.8
MGA_1348	LOCUS_13400	sequence13:8564..9046(-)	partial			WP_005453841.1	NlpC/P60 family protein	71.2	69.5	54.4
MGA_1357	LOCUS_13490	sequence13:21230..21436(-)	partial			WP_010919185.1	DUF1289 domain-containing protein	73.5	70.3	50.0
MGA_1379	LOCUS_13710	sequence13:39091..41967(-)	partial			WP_206819303.1	pullulanase-type alpha-1,6-glucosidase	95.7	66.8	54.8
MGA_1397	LOCUS_13890	sequence14:10885..11913(+)	partial			WP_005480572.1	hypothetical protein	65.5	68.0	48.9
MGA_1400	LOCUS_13920	sequence14:17178..18320(-)	partial			WP_010969012.1	site-specific integrase	58.7	70.0	32.7
MGA_1405	LOCUS_13970	sequence14:22030..23718(-)	partial			WP_000083142.1	site-specific integrase	30.4	27.9	29.7
MGA_1461	LOCUS_14530	sequence15:35670..35894(-)	partial			WP_000718107.1	membrane protein insertion efficiency factor YidD	81.1	68.2	43.3
MGA_1473	LOCUS_14650	sequence15:45125..46906(+)	partial			WP_213681071.1	bifunctional diguanylate cyclase/phosphodiesterase	72.5	60.0	34.1
MGA_1483	LOCUS_14740	sequence16:1..1024(+)	frameshift		1012	WP_193447512.1	VCBS domain-containing protein	99.1	11.0	73.0
MGA_1484	LOCUS_14750	sequence16:1026..5543(+)	frameshift		1012	WP_193447512.1	VCBS domain-containing protein	49.0	22.5	34.5
MGA_1511	LOCUS_15020	sequence16:32863..33948(+)	partial			WP_013223212.1	ABC transporter substrate-binding protein	38.2	38.4	25.4
MGA_1512	LOCUS_15030	sequence16:33949..35784(+)	partial			WP_011056768.1	diguanylate cyclase	40.1	30.8	34.3
MGA_1516	LOCUS_15070	sequence16:39285..40679(+)	partial			WP_012259742.1	diguanylate cyclase	47.2	28.8	38.9
MGA_1529	LOCUS_15200	sequence17:2..568(+)	frameshift		496,514,502	WP_000052484.1	Ig-like domain-containing protein	85.6	2.2	39.1
MGA_1530	LOCUS_15210	sequence17:483..5894(+)	partial			WP_011263951.1	Ig-like domain-containing protein	94.7	45.1	24.8
MGA_1538	LOCUS_15290	sequence17:14374..14778(-)	partial			WP_000908540.1	N-acetyltransferase	42.5	34.1	49.1
MGA_1620	LOCUS_16100	sequence19:8983..10950(-)	partial			WP_011388197.1	ATP-binding protein	43.1	31.0	41.7
MGA_1629	LOCUS_16190	sequence19:21075..22772(-)	partial			WP_162811897.1	serine protease	62.1	68.2	54.7
MGA_1647	LOCUS_16370	sequence19:38433..39914(+)	partial			WP_015063994.1	EAL domain-containing protein	94.7	66.1	30.3
MGA_1655	LOCUS_16450	sequence19:46130..47872(-)	partial			WP_012259627.1	PAS domain S-box protein	27.6	13.8	40.1
MGA_1672	LOCUS_16620	sequence20:20059..20508(-)	partial			WP_005479163.1	TIGR00153 family protein	100.0	65.9	85.2
MGA_1694	LOCUS_16840	sequence20:46913..47290(-)	partial			WP_045788985.1	RDD family protein	94.4	66.5	53.8
MGA_1733	LOCUS_17230	sequence21:37732..39321(+)	partial			WP_005461251.1	response regulator	75.0	36.8	28.7
MGA_1813	LOCUS_18020	sequence23:51830..54229(+)	partial			WP_015705077.1	hypothetical protein	13.1	12.8	34.5
MGA_1817	LOCUS_18060	sequence23:57476..57667(-)	partial			WP_105530349.1	putative addiction module antidote protein	96.8	31.4	59.0
MGA_1854	LOCUS_18430	sequence23:96729..97070(+)	partial			WP_003089312.1	metalloregulator ArsR/SmtB family transcription factor	69.9	68.1	55.7
MGA_1866	LOCUS_18550	sequence23:110376..110870(+)	partial			WP_014208084.1	DUF1003 domain-containing protein	89.0	68.7	52.7
MGA_1867	LOCUS_18560	sequence23:111158..112195(+)	frameshift		111964	WP_011106455.1	S-type pyocin domain-containing protein	78.0	30.4	40.1
MGA_1868	LOCUS_18570	sequence23:112213..113676(+)	partial			WP_013096824.1	S-type pyocin domain-containing protein	74.9	62.7	30.0
MGA_1877	LOCUS_18660	sequence23:121575..121994(+)	partial			WP_005461146.1	YbaY family lipoprotein	77.0	74.3	43.9
MGA_1888	LOCUS_18770	sequence23:133987..134349(+)	partial			WP_013225580.1	cyclophilin-like fold protein	81.7	68.5	46.9
MGA_1912	LOCUS_19010	sequence23:162514..162696(-)	partial			WP_000106914.1	pleiotropic regulatory protein RsmS	83.3	71.4	60.0
MGA_1936	LOCUS_19250	sequence24:25530..26786(-)	partial			WP_011337937.1	EAL domain-containing protein	43.8	22.1	40.1
MGA_1943	LOCUS_19320	sequence24:32988..35003(+)	partial			WP_012067720.1	YDG domain-containing protein	70.6	29.4	29.2
MGA_1944	LOCUS_19330	sequence24:35193..>36387(-)	partial			WP_065525186.1	DUF4084 domain-containing protein	59.2	28.6	31.9
MGA_1974	LOCUS_19630	sequence25:28822..29199(-)	partial			WP_029409206.1	RHS repeat-associated core domain-containing protein	68.0	30.2	41.1
MGA_1977	LOCUS_19660	sequence25:31689..33452(-)	partial			WP_011084726.1	DUF87 domain-containing protein	41.6	35.9	37.1
MGA_1981	LOCUS_19680	sequence26:585..4952(-)	frameshift		620,623	WP_193447512.1	VCBS domain-containing protein	98.5	46.1	53.7
MGA_1996	LOCUS_19830	sequence26:21528..22523(-)	partial			WP_003658889.1	response regulator YycF	38.1	50.6	37.3
MGA_2033	LOCUS_20200	sequence27:22623..24227(+)	partial			WP_011263511.1	methyl-accepting chemotaxis protein	68.9	57.8	43.5
MGA_2053	LOCUS_20380	sequence28:14958..15467(-)	partial			WP_001259538.1	protein-disulfide reductase DsbD	60.4	17.0	42.2
MGA_2075	LOCUS_20600	sequence29:8701..11241(+)	partial			WP_011057122.1	PAS domain S-box protein	25.7	16.0	38.7
MGA_2076	LOCUS_20610	sequence29:11232..13484(+)	partial			WP_011022007.1	PAS domain-containing protein	48.0	36.5	37.3
MGA_2094	LOCUS_20790	sequence29:34032..34655(+)	partial			WP_011249791.1	SagB/ThcOx family dehydrogenase	86.0	74.0	41.6
MGA_2098	LOCUS_20830	sequence29:36006..36338(+)	frameshift,internal_stop_codon	36336..36338(+)	36344	WP_004534689.1	LysR family transcriptional regulator	93.6	32.9	47.6
MGA_2099	LOCUS_20840	sequence29:36335..36922(+)	frameshift		36332	WP_004184733.1	LysR family transcriptional regulator	95.4	62.5	34.9
MGA_2116	LOCUS_21010	sequence29:54604..54831(-)	partial			WP_011072111.1	integron integrase	100.0	23.2	68.0
MGA_2117	LOCUS_21020	sequence29:54816..55238(-)	frameshift		55252	WP_011263500.1	integron integrase	86.4	37.0	51.2
MGA_2172	LOCUS_21560	sequence32:6964..7179(+)	partial			WP_005419232.1	cbb3-type cytochrome oxidase assembly protein CcoS	64.8	79.3	87.0
MGA_2257	LOCUS_22400	sequence34:62469..62975(+)	partial			WP_003104247.1	phosphatidic acid-binding protein	74.4	72.5	48.8
MGA_2261	LOCUS_22440	sequence34:66956..67633(-)	partial			WP_005462012.1	cation diffusion facilitator family transporter	92.4	70.5	53.8
MGA_2319	LOCUS_23010	sequence34:126893..127657(+)	partial			WP_005463046.1	PTS sugar transporter subunit IIA	72.8	72.5	26.7
MGA_2343	LOCUS_23240	sequence35:12960..13415(-)	partial			WP_011106455.1	S-type pyocin domain-containing protein	90.1	15.7	69.9
MGA_2346	LOCUS_23270	sequence35:15785..17527(-)	partial			WP_011106455.1	S-type pyocin domain-containing protein	92.9	61.7	36.9
MGA_2357	LOCUS_23380	sequence35:29867..30922(-)	partial			WP_011261600.1	cell envelope integrity protein TolA	33.9	34.4	51.3
MGA_2398	LOCUS_23760	sequence38:38..487(+)	partial			WP_000031644.1	elongation factor Tu	100.0	37.8	92.6
MGA_2430	LOCUS_24080	sequence39:2141..2524(-)	partial			WP_011706064.1	RNA polymerase-binding protein DksA	70.9	74.6	39.8
MGA_2458	LOCUS_24350	sequence41:8947..9414(-)	partial			WP_011261411.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	95.5	62.4	61.5
MGA_2474	LOCUS_24500	sequence43:2524..3279(-)	partial			WP_011836218.1	restriction endonuclease	52.6	33.5	32.8
MGA_2475	LOCUS_24510	sequence43:3428..4216(-)	frameshift		4326	WP_164929392.1	IS3-like element ISGvi5 family transposase	98.9	64.6	40.6
MGA_2486	LOCUS_24610	sequence45:3144..3908(-)	frameshift		3919	WP_005480577.1	long-chain fatty acid--CoA ligase	99.2	41.9	69.4
MGA_2487	LOCUS_24620	sequence45:3917..4930(-)	frameshift		3919	WP_005480577.1	long-chain fatty acid--CoA ligase	98.5	55.3	52.9
MGA_2562	LOCUS_25370	sequence45:89052..89798(+)	partial			WP_065611989.1	DUF481 domain-containing protein	88.7	66.1	38.2
MGA_2608	LOCUS_25830	sequence47:2359..4230(+)	partial			WP_164081809.1	hypothetical protein	60.5	58.6	47.9
MGA_2610	LOCUS_25850	sequence47:4486..5310(+)	partial			WP_164081809.1	hypothetical protein	93.1	37.5	40.2
MGA_2612	LOCUS_25860	sequence48:637..1479(+)	partial			WP_000212116.1	type VI secretion system tip protein TssI/VgrG	92.9	22.3	63.5
MGA_2615	LOCUS_25890	sequence49:1..636(+)	partial			WP_000212116.1	type VI secretion system tip protein TssI/VgrG	96.7	17.2	51.5
MGA_2631	LOCUS_25960	sequence56:1..841(+)	partial			WP_001880813.1	polar hub landmark protein HubP	77.1	11.4	30.5
MGA_2664	LOCUS_26290	sequence56:38124..38306(-)	partial			WP_000340598.1	YkgJ family cysteine cluster protein	100.0	73.2	66.7
MGA_2713	LOCUS_26780	sequence56:97998..98471(+)	frameshift		98420	WP_001888250.1	sigma-54 dependent transcriptional regulator	86.0	29.2	58.8
MGA_2714	LOCUS_26790	sequence56:98450..99445(+)	frameshift		98381	WP_011106018.1	sigma-54 dependent transcriptional regulator	97.9	67.3	67.9
MGA_2717	LOCUS_26820	sequence56:100888..101322(-)	partial			WP_011705475.1	LON peptidase substrate-binding domain-containing protein	86.1	64.4	42.7
MGA_2727	LOCUS_26920	sequence56:113834..114448(-)	frameshift		114474	WP_000098720.1	23S rRNA pseudouridine(2457) synthase RluE	80.4	68.0	68.3
MGA_2783	LOCUS_27460	sequence59:34557..35390(+)	partial			WP_004530507.1	nucleotidyl transferase AbiEii/AbiGii toxin family protein	70.4	64.9	33.7
MGA_2820	LOCUS_27830	sequence59:71352..73454(-)	partial			WP_010919333.1	glycosyltransferase FlmG	43.1	51.7	27.1
MGA_2824	LOCUS_27870	sequence59:76939..78297(+)	partial			WP_000052031.1	flagellar filament capping protein FliD	53.1	36.5	49.8
MGA_2836	LOCUS_27990	sequence59:89371..90999(+)	partial			WP_172625952.1	flagellar hook-length control protein FliK	83.0	74.3	30.6
MGA_2890	LOCUS_28520	sequence60:6688..7932(-)	frameshift		7939	WP_005459312.1	ATP-binding protein	96.6	58.0	69.8
MGA_2891	LOCUS_28530	sequence60:7814..8812(-)	frameshift		7939	WP_005459312.1	ATP-binding protein	83.1	37.5	63.4
MGA_3035	LOCUS_29950	sequence61:46309..46881(-)	partial			WP_011706236.1	tRNA-uridine aminocarboxypropyltransferase	91.1	68.4	54.6
MGA_3063	LOCUS_30230	sequence61:81675..82157(+)	partial			WP_005462465.1	DUF2780 domain-containing protein	71.9	70.4	36.5
MGA_3075	LOCUS_30350	sequence61:98494..98802(-)	partial			WP_005175027.1	helix-turn-helix transcriptional regulator	64.7	64.1	40.9
