{
    "tc_result": [
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            "organism_name": "Rodentibacter ratti",
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            "accession": "GCA_002000485.1",
            "taxid": 1906745,
            "species_taxid": 1906745,
            "relation_to_type": "type",
            "validated": true,
            "ani": 100.0,
            "matched_fragments": 661,
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            "ani_threshold": 95,
            "status": "conclusive"
        },
        {
            "organism_name": "Rodentibacter mrazii",
            "strain": "strain=Ppn418",
            "accession": "GCA_001998825.1",
            "taxid": 1908257,
            "species_taxid": 1908257,
            "relation_to_type": "type",
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            "ani": 90.4948,
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            "ani_threshold": 95,
            "status": "below_threshold"
        },
        {
            "organism_name": "Rodentibacter pneumotropicus",
            "strain": "strain=ATCC 35149",
            "accession": "GCA_000730685.1",
            "taxid": 758,
            "species_taxid": 758,
            "relation_to_type": "type",
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            "ani_threshold": 95,
            "status": "below_threshold"
        },
        {
            "organism_name": "Rodentibacter pneumotropicus",
            "strain": "strain=DSM 21403",
            "accession": "GCA_000379905.1",
            "taxid": 758,
            "species_taxid": 758,
            "relation_to_type": "type",
            "validated": true,
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            "matched_fragments": 586,
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            "ani_threshold": 95,
            "status": "below_threshold"
        },
        {
            "organism_name": "Rodentibacter rarus",
            "strain": "strain=CCUG 17206",
            "accession": "GCA_001998965.1",
            "taxid": 1908260,
            "species_taxid": 1908260,
            "relation_to_type": "type",
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            "ani": 85.6891,
            "matched_fragments": 481,
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            "ani_threshold": 95,
            "status": "below_threshold"
        },
        {
            "organism_name": "Rodentibacter trehalosifermentans",
            "strain": "strain=H1987082031",
            "accession": "GCA_002000545.1",
            "taxid": 1908263,
            "species_taxid": 1908263,
            "relation_to_type": "type",
            "validated": true,
            "ani": 84.7626,
            "matched_fragments": 494,
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            "ani_threshold": 95,
            "status": "below_threshold"
        },
        {
            "organism_name": "Rodentibacter myodis",
            "strain": "strain=Ac151",
            "accession": "GCA_001999305.1",
            "taxid": 1907939,
            "species_taxid": 1907939,
            "relation_to_type": "type",
            "validated": true,
            "ani": 80.904,
            "matched_fragments": 440,
            "total_fragments": 665,
            "ani_threshold": 95,
            "status": "below_threshold"
        },
        {
            "organism_name": "Rodentibacter haemolyticus",
            "strain": "strain=DSM 111151",
            "accession": "GCA_015356115.1",
            "taxid": 2778911,
            "species_taxid": 2778911,
            "relation_to_type": "type",
            "validated": true,
            "ani": 80.3184,
            "matched_fragments": 445,
            "total_fragments": 665,
            "ani_threshold": 95,
            "status": "below_threshold"
        },
        {
            "organism_name": "Haemophilus haemolyticus",
            "strain": "strain=CCUG 12834",
            "accession": "GCA_001679045.1",
            "taxid": 726,
            "species_taxid": 726,
            "relation_to_type": "type",
            "validated": true,
            "ani": 79.0296,
            "matched_fragments": 315,
            "total_fragments": 665,
            "ani_threshold": 95,
            "status": "below_threshold"
        },
        {
            "organism_name": "Aggregatibacter segnis",
            "strain": "strain=ATCC 33393",
            "accession": "GCA_000185305.1",
            "taxid": 739,
            "species_taxid": 739,
            "relation_to_type": "type",
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            "ani": 78.3135,
            "matched_fragments": 216,
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            "ani_threshold": 95,
            "status": "below_threshold"
        },
        {
            "organism_name": "Pasteurella multocida subsp. gallicida",
            "strain": "strain=NCTC10204",
            "accession": "GCA_900636625.1",
            "taxid": 123812,
            "species_taxid": 747,
            "relation_to_type": "type",
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            "ani_threshold": 95,
            "status": "below_threshold"
        },
        {
            "organism_name": "Pasteurella multocida subsp. septica",
            "strain": "strain=NCTC11995",
            "accession": "GCA_900454845.1",
            "taxid": 115545,
            "species_taxid": 747,
            "relation_to_type": "type",
            "validated": true,
            "ani": 77.5772,
            "matched_fragments": 191,
            "total_fragments": 665,
            "ani_threshold": 95,
            "status": "below_threshold"
        }
    ],
    "cc_result": {
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0
    },
    "gtdb_result": [
        {
            "accession": "GCF_002000485.1",
            "gtdb_species": "s__Rodentibacter ratti",
            "ani": 100.0,
            "matched_fragments": 661,
            "total_fragments": 665,
            "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Rodentibacter",
            "ani_circumscription_radius": 95.0,
            "mean_intra_species_ani": "96.24",
            "min_intra_species_ani": "96.11",
            "mean_intra_species_af": "0.85",
            "min_intra_species_af": "0.81",
            "num_clustered_genomes": 4,
            "status": "conclusive"
        },
        {
            "accession": "GCF_001998825.1",
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            "ani": 90.4948,
            "matched_fragments": 551,
            "total_fragments": 665,
            "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Rodentibacter",
            "ani_circumscription_radius": 95.0,
            "mean_intra_species_ani": "95.11",
            "min_intra_species_ani": "95.11",
            "mean_intra_species_af": "0.86",
            "min_intra_species_af": "0.86",
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            "status": "-"
        },
        {
            "accession": "GCF_000379905.1",
            "gtdb_species": "s__Rodentibacter pneumotropicus",
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            "matched_fragments": 586,
            "total_fragments": 665,
            "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Rodentibacter",
            "ani_circumscription_radius": 95.0,
            "mean_intra_species_ani": "98.90",
            "min_intra_species_ani": "97.98",
            "mean_intra_species_af": "0.93",
            "min_intra_species_af": "0.87",
            "num_clustered_genomes": 18,
            "status": "-"
        },
        {
            "accession": "GCF_001999425.1",
            "gtdb_species": "s__Rodentibacter sp001999425",
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            "matched_fragments": 571,
            "total_fragments": 665,
            "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Rodentibacter",
            "ani_circumscription_radius": 95.0,
            "mean_intra_species_ani": "N/A",
            "min_intra_species_ani": "N/A",
            "mean_intra_species_af": "N/A",
            "min_intra_species_af": "N/A",
            "num_clustered_genomes": 1,
            "status": "-"
        },
        {
            "accession": "GCF_001019715.1",
            "gtdb_species": "s__Rodentibacter heylii",
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            "total_fragments": 665,
            "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Rodentibacter",
            "ani_circumscription_radius": 95.0,
            "mean_intra_species_ani": "98.70",
            "min_intra_species_ani": "95.96",
            "mean_intra_species_af": "0.96",
            "min_intra_species_af": "0.90",
            "num_clustered_genomes": 9,
            "status": "-"
        },
        {
            "accession": "GCF_001999335.1",
            "gtdb_species": "s__Rodentibacter sp001999335",
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            "matched_fragments": 563,
            "total_fragments": 665,
            "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Rodentibacter",
            "ani_circumscription_radius": 95.0,
            "mean_intra_species_ani": "N/A",
            "min_intra_species_ani": "N/A",
            "mean_intra_species_af": "N/A",
            "min_intra_species_af": "N/A",
            "num_clustered_genomes": 1,
            "status": "-"
        },
        {
            "accession": "GCF_001998965.1",
            "gtdb_species": "s__Rodentibacter rarus",
            "ani": 85.6833,
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            "total_fragments": 665,
            "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Rodentibacter",
            "ani_circumscription_radius": 95.0,
            "mean_intra_species_ani": "99.19",
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            "mean_intra_species_af": "0.90",
            "min_intra_species_af": "0.90",
            "num_clustered_genomes": 2,
            "status": "-"
        },
        {
            "accession": "GCF_001999285.1",
            "gtdb_species": "s__Rodentibacter sp001999285",
            "ani": 85.651,
            "matched_fragments": 530,
            "total_fragments": 665,
            "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Rodentibacter",
            "ani_circumscription_radius": 95.0,
            "mean_intra_species_ani": "97.96",
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            "mean_intra_species_af": "0.90",
            "min_intra_species_af": "0.90",
            "num_clustered_genomes": 3,
            "status": "-"
        },
        {
            "accession": "GCF_002000125.1",
            "gtdb_species": "s__Rodentibacter heidelbergensis",
            "ani": 84.5771,
            "matched_fragments": 481,
            "total_fragments": 665,
            "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Rodentibacter",
            "ani_circumscription_radius": 95.0,
            "mean_intra_species_ani": "N/A",
            "min_intra_species_ani": "N/A",
            "mean_intra_species_af": "N/A",
            "min_intra_species_af": "N/A",
            "num_clustered_genomes": 1,
            "status": "-"
        }
    ]
}