{ "type": "genome", "identifier": "GCF_002014765.1", "organism": "Moraxella lincolnii", "title": "Moraxella lincolnii", "description": "na", "data type": "Genome sequencing and assembly", "organization": "TAILORED-Treatment project", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002014765.1", "bioproject": "PRJNA224116", "biosample": "SAMN06291427", "wgs_master": "MUYT00000000.1", "refseq_category": "na", "taxid": "90241", "species_taxid": "90241", "organism_name": "Moraxella lincolnii", "infraspecific_name": "strain=CCUG 9405", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/03/03", "asm_name": "ASM201476v1", "asm_submitter": "TAILORED-Treatment project", "gbrs_paired_asm": "GCA_002014765.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/014/765/GCF_002014765.1_ASM201476v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2076923", "genome_size_ungapped": "2076780", "gc_percent": "42.500000", "replicon_count": "0", "scaffold_count": "29", "contig_count": "29", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_002014765.1-RS_2024_03_28", "annotation_date": "2024-03-28", "total_gene_count": "1848", "protein_coding_gene_count": "1766", "non_coding_gene_count": "50", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-03-03", "dateModified": "2017-03-03", "datePublished": "2017-03-03", "_annotation": { "sample_count": 1, "sample_organism": [ "Moraxella lincolnii" ], "sample_taxid": [ "90241" ], "sample_host_organism": [ "Homo sapiens" ], "sample_host_organism_id": [], "sample_host_disease": [ "Unknown" ], "sample_host_disease_id": [], "sample_host_location": [ "Sweden: Vastra Gotaland, Gothenburg" ], "sample_host_location_id": [], "data_size": "0.580 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "2076923", "Number of Sequences": "29", "Longest Sequences (bp)": "650670", "N50 (bp)": "269287", "Gap Ratio (%)": "0.007078", "GCcontent (%)": "42.7", "Number of CDSs": "1789", "Average Protein Length": "330.2", "Coding Ratio (%)": "85.3", "Number of rRNAs": "3", "Number of tRNAs": "43", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Moraxella lincolnii", "strain": "strain=CCUG 9405", "accession": "GCA_002014765.1", "taxid": 90241, "species_taxid": 90241, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 678, 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"vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Moraxella", "lincolnii" ], "quality": 5, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }