{ "type": "genome", "identifier": "GCF_002026305.1", "organism": "Vagococcus martis", "title": "Vagococcus martis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Kyung Hee University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002026305.1", "bioproject": "PRJNA224116", "biosample": "SAMN06241148", "wgs_master": "MVAB00000000.1", "refseq_category": "reference genome", "taxid": "1768210", "species_taxid": "1768210", "organism_name": "Vagococcus martis", "infraspecific_name": "strain=D7T301", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/03/14", "asm_name": "ASM202630v1", "asm_submitter": "Kyung Hee University", "gbrs_paired_asm": "GCA_002026305.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/026/305/GCF_002026305.1_ASM202630v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2561923", "genome_size_ungapped": "2561923", "gc_percent": "34.000000", "replicon_count": "0", "scaffold_count": "3", "contig_count": "3", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_002026305.1-RS_2024_12_13", "annotation_date": "2024-12-13", "total_gene_count": "2507", "protein_coding_gene_count": "2370", "non_coding_gene_count": "73", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-03-14", "dateModified": "2017-03-14", "datePublished": "2017-03-14", "_annotation": { "sample_count": 1, "sample_organism": [ "Vagococcus martis" ], "sample_taxid": [ "1768210" ], "sample_host_organism": [ "Martes flavigula" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South 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"status": "inconclusive" }, { "organism_name": "Vagococcus teuberi", "strain": "strain=DSM 21459", "accession": "GCA_001870205.1", "taxid": 519472, "species_taxid": 519472, "relation_to_type": "type", "validated": true, "ani": 95.5508, "matched_fragments": 634, "total_fragments": 853, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Vagococcus bubulae", "strain": "strain=SS1994", "accession": "GCA_003950315.1", "taxid": 1977868, "species_taxid": 1977868, "relation_to_type": "type", "validated": true, "ani": 84.7878, "matched_fragments": 558, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vagococcus carniphilus", "strain": "strain=ATCC BAA-640", "accession": "GCA_014397115.1", "taxid": 218144, "species_taxid": 218144, "relation_to_type": "type", "validated": true, "ani": 79.4448, "matched_fragments": 222, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vagococcus 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"vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Vagococcus", "martis" ], "quality": 5, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }